FFCP PHASE1:Hg19::chr1:6086424..6086442,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8514 | |EntrezGene=8514 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6229 | |HGNC=6229 | ||
|TSSclassifier=strong | |||
|UniProt=Q13303,E7ESI4,Q2YD85,B0AZR7 | |UniProt=Q13303,E7ESI4,Q2YD85,B0AZR7 | ||
|association_with_transcript=44bp_to_ENST00000341524,ENST00000352527,ENST00000378087,uc001alu.2,uc001alv.1,uc001alw.1_5end | |association_with_transcript=44bp_to_ENST00000341524,ENST00000352527,ENST00000378087,uc001alu.2,uc001alv.1,uc001alw.1_5end | ||
|cluster_id=chr1:6086424..6086442,+ | |||
|coexpression_cluster_id=C2595 | |coexpression_cluster_id=C2595 | ||
|description=CAGE_peak_3_at_KCNAB2_5end | |description=CAGE_peak_3_at_KCNAB2_5end | ||
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|ontology_enrichment_celltype=CL:0000037!4.57e-72!172;CL:0000566!4.57e-72!172;CL:0000988!3.70e-68!182;CL:0002032!7.69e-68!165;CL:0000837!7.69e-68!165;CL:0000738!2.06e-67!140;CL:0002031!2.26e-58!124;CL:0002087!2.53e-57!119;CL:0000763!8.86e-44!112;CL:0000049!8.86e-44!112;CL:0000766!5.91e-41!76;CL:0000557!8.63e-38!71;CL:0000839!1.53e-36!70;CL:0002009!1.94e-34!65;CL:0002194!3.82e-34!63;CL:0000576!3.82e-34!63;CL:0000040!3.82e-34!63;CL:0000559!3.82e-34!63;CL:0000860!2.14e-26!45;CL:0002057!2.73e-26!42;CL:0000542!3.50e-20!53;CL:0000051!3.50e-20!53;CL:0000838!9.22e-20!52;CL:0000084!8.37e-13!25;CL:0000827!8.37e-13!25;CL:0000791!2.15e-10!18;CL:0000789!2.15e-10!18;CL:0002420!2.15e-10!18;CL:0002419!2.15e-10!18;CL:0000790!2.15e-10!18;CL:0000134!5.30e-10!358;CL:0000219!3.58e-09!390;CL:0002320!6.36e-09!365;CL:0000625!2.08e-07!11;CL:0000945!4.46e-07!24;CL:0000826!4.46e-07!24 | |ontology_enrichment_celltype=CL:0000037!4.57e-72!172;CL:0000566!4.57e-72!172;CL:0000988!3.70e-68!182;CL:0002032!7.69e-68!165;CL:0000837!7.69e-68!165;CL:0000738!2.06e-67!140;CL:0002031!2.26e-58!124;CL:0002087!2.53e-57!119;CL:0000763!8.86e-44!112;CL:0000049!8.86e-44!112;CL:0000766!5.91e-41!76;CL:0000557!8.63e-38!71;CL:0000839!1.53e-36!70;CL:0002009!1.94e-34!65;CL:0002194!3.82e-34!63;CL:0000576!3.82e-34!63;CL:0000040!3.82e-34!63;CL:0000559!3.82e-34!63;CL:0000860!2.14e-26!45;CL:0002057!2.73e-26!42;CL:0000542!3.50e-20!53;CL:0000051!3.50e-20!53;CL:0000838!9.22e-20!52;CL:0000084!8.37e-13!25;CL:0000827!8.37e-13!25;CL:0000791!2.15e-10!18;CL:0000789!2.15e-10!18;CL:0002420!2.15e-10!18;CL:0002419!2.15e-10!18;CL:0000790!2.15e-10!18;CL:0000134!5.30e-10!358;CL:0000219!3.58e-09!390;CL:0002320!6.36e-09!365;CL:0000625!2.08e-07!11;CL:0000945!4.46e-07!24;CL:0000826!4.46e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000473;1.12e-24;39!CL:0000234;1.12e-24;39!CL:0000860;1.24e-24;33!CL:0002057;1.24e-24;33!CL:0000576;2.35e-22;48!CL:0000766;2.50e-20;69!CL:0002087;5.64e-18;104!CL:0000738;8.56e-17;136!CL:0000763;9.14e-16;100!CL:0000084;8.20e-15;25!CL:0000988;1.13e-13;177!CL:0000542;1.55e-13;53!CL:0000791;5.36e-12;18!CL:0000789;5.36e-12;18!CL:0002419;5.36e-12;18!CL:0000625;1.83e-08;11!CL:0000945;5.57e-08;24!CL:0000219;8.24e-07;193 | |ontology_enrichment_celltype_v019=CL:0000473;1.12e-24;39!CL:0000234;1.12e-24;39!CL:0000860;1.24e-24;33!CL:0002057;1.24e-24;33!CL:0000576;2.35e-22;48!CL:0000766;2.50e-20;69!CL:0002087;5.64e-18;104!CL:0000738;8.56e-17;136!CL:0000763;9.14e-16;100!CL:0000084;8.20e-15;25!CL:0000988;1.13e-13;177!CL:0000542;1.55e-13;53!CL:0000791;5.36e-12;18!CL:0000789;5.36e-12;18!CL:0002419;5.36e-12;18!CL:0000625;1.83e-08;11!CL:0000945;5.57e-08;24!CL:0000219;8.24e-07;193 | ||
|ontology_enrichment_celltype_v019_2=CL:0000037,7.39e-87,168;CL:0000988,1.08e-82,177;CL:0002032,7.76e-82,161;CL:0000837,7.76e-82,161;CL:0000738,1.82e-80,136;CL:0002031,8.91e-70,120;CL:0002087,1.38e-68,115;CL:0000763,2.32e-53,108;CL:0000049,2.32e-53,108;CL:0000766,1.59e-49,72;CL:0000557,9.08e-46,67;CL:0000839,2.97e-44,66;CL:0002009,8.29e-42,61;CL:0002194,1.65e-41,59;CL:0000576,1.65e-41,59;CL:0000040,1.65e-41,59;CL:0000559,1.65e-41,59;CL:0000473,9.24e-36,48;CL:0000234,9.24e-36,48;CL:0000860,7.96e-31,42;CL:0002057,7.96e-31,42;CL:0000542,1.36e-23,53;CL:0000051,1.36e-23,53;CL:0000838,4.30e-23,52;CL:0000134,2.87e-15,354;CL:0000084,7.41e-15,25;CL:0000827,7.41e-15,25;CL:0002320,5.43e-14,361;CL:0000219,6.66e-14,386;CL:0000791,5.24e-12,18;CL:0000789,5.24e-12,18;CL:0002420,5.24e-12,18;CL:0002419,5.24e-12,18;CL:0000790,5.24e-12,18;CL:0000625,1.76e-08,11;CL:0000945,4.33e-08,24;CL:0000826,4.33e-08,24 | |||
|ontology_enrichment_development_v019=CL:0002057;1.72e-22;42!CL:0000049;1.03e-14;108!CL:0000051;1.55e-13;53!CL:0000790;5.36e-12;18 | |ontology_enrichment_development_v019=CL:0002057;1.72e-22;42!CL:0000049;1.03e-14;108!CL:0000051;1.55e-13;53!CL:0000790;5.36e-12;18 | ||
|ontology_enrichment_disease=DOID:2531!2.22e-10!51;DOID:0060083!2.22e-10!51;DOID:1240!5.52e-08!39 | |ontology_enrichment_disease=DOID:2531!2.22e-10!51;DOID:0060083!2.22e-10!51;DOID:1240!5.52e-08!39 | ||
|ontology_enrichment_disease_v019=DOID:2531;4.13e-08;51!DOID:0060083;4.13e-08;51!DOID:1240;5.67e-08;39 | |ontology_enrichment_disease_v019=DOID:2531;4.13e-08;51!DOID:0060083;4.13e-08;51!DOID:1240;5.67e-08;39 | ||
|ontology_enrichment_disease_v019_2=DOID:2531,7.79e-13,51;DOID:0060083,7.79e-13,51;DOID:1240,7.49e-10,39 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.22e-41!102;UBERON:0003061!1.22e-41!102;UBERON:0002193!5.33e-36!112;UBERON:0002371!3.34e-32!80;UBERON:0001474!3.57e-27!86;UBERON:0002405!2.28e-24!115;UBERON:0004765!1.24e-18!101;UBERON:0001434!1.24e-18!101;UBERON:0002384!3.24e-08!375;UBERON:0000178!4.31e-07!15;UBERON:0000179!4.31e-07!15;UBERON:0000463!4.31e-07!15 | |ontology_enrichment_uberon=UBERON:0002390!1.22e-41!102;UBERON:0003061!1.22e-41!102;UBERON:0002193!5.33e-36!112;UBERON:0002371!3.34e-32!80;UBERON:0001474!3.57e-27!86;UBERON:0002405!2.28e-24!115;UBERON:0004765!1.24e-18!101;UBERON:0001434!1.24e-18!101;UBERON:0002384!3.24e-08!375;UBERON:0000178!4.31e-07!15;UBERON:0000179!4.31e-07!15;UBERON:0000463!4.31e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.37e-08;15!UBERON:0000179;4.37e-08;15!UBERON:0000463;4.37e-08;15 | |ontology_enrichment_uberon_v019=UBERON:0000178;4.37e-08;15!UBERON:0000179;4.37e-08;15!UBERON:0000463;4.37e-08;15 | ||
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| ||
|short_description=p3@KCNAB2 | |short_description=p3@KCNAB2 | ||
}} | }} |
Latest revision as of 18:01, 18 September 2015
Short description: | p3@KCNAB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_KCNAB2_5end |
Coexpression cluster: | C2595_Melanocyte_granulocyte_Monocytederived_CD14_acute_CD4_Macrophage |
Association with transcript: | 44bp_to_ENST00000341524, ENST00000352527, ENST00000378087, uc001alu.2, uc001alv.1, uc001alw.1_5end |
EntrezGene: | KCNAB2 |
HGNC: | 6229 |
UniProt: | Q13303E7ESI4Q2YD85B0AZR7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.64e-50 | 98 |
blood island | 1.64e-50 | 98 |
hemolymphoid system | 2.60e-44 | 108 |
bone marrow | 2.36e-39 | 76 |
immune system | 1.11e-36 | 93 |
bone element | 3.93e-34 | 82 |
skeletal element | 2.40e-28 | 90 |
skeletal system | 1.47e-22 | 100 |
connective tissue | 1.96e-13 | 371 |
lateral plate mesoderm | 9.45e-11 | 203 |
blood | 4.16e-08 | 15 |
haemolymphatic fluid | 4.16e-08 | 15 |
organism substance | 4.16e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 7.79e-13 | 51 |
immune system cancer | 7.79e-13 | 51 |
leukemia | 7.49e-10 | 39 |