FFCP PHASE1:Hg19::chr12:51664058..51664075,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:51664058..51664075,-
|short_description=p2@SMAGP
|description=CAGE_peak_2_at_SMAGP_5end
|association_with_transcript=-64bp_to_ENST00000398453,NM_001033873...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57228 | |EntrezGene=57228 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26918 | |HGNC=26918 | ||
|TSSclassifier=strong | |||
|UniProt=Q0VAQ4 | |UniProt=Q0VAQ4 | ||
|association_with_transcript=-64bp_to_ENST00000398453,NM_001033873,uc001ryd.1_5end | |||
|cluster_id=chr12:51664058..51664075,- | |||
|description=CAGE_peak_2_at_SMAGP_5end | |||
|id=chr12:51664058..51664075,- | |||
|ontology_enrichment_celltype=CL:0000220!1.75e-17!246;CL:0002321!1.81e-17!248;CL:0000055!6.52e-16!180;CL:0000066!9.51e-15!254;CL:0000222!4.14e-14!119;CL:0000183!7.76e-12!59;CL:0000680!1.15e-11!57;CL:0000056!1.15e-11!57;CL:0000355!1.15e-11!57;CL:0000187!8.66e-11!54;CL:0000548!2.39e-10!679;CL:0000004!2.39e-10!679;CL:0000255!2.39e-10!679;CL:0000012!1.02e-09!682;CL:0000057!1.09e-09!75;CL:0002139!2.26e-09!24;CL:0000393!3.55e-09!60;CL:0000211!3.55e-09!60;CL:0000192!4.98e-09!42;CL:0000514!4.98e-09!42;CL:0000071!8.27e-09!18;CL:0002546!8.27e-09!18;CL:0000359!4.23e-08!32;CL:0000115!1.78e-07!35;CL:0000144!9.71e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0002139;4.40e-10;24!CL:0000071;1.78e-09;18!CL:0000359;9.24e-08;32!CL:0000115;1.58e-07;36!CL:0000192;5.87e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,8.26e-17,250;CL:0000222,1.09e-14,121;CL:0000066,4.53e-12,253;CL:0000680,9.22e-12,58;CL:0000056,9.22e-12,58;CL:0000355,9.22e-12,58;CL:0000187,7.67e-11,55;CL:0002139,6.96e-10,24;CL:0000057,1.54e-09,76;CL:0000071,2.77e-09,18;CL:0002546,2.77e-09,18;CL:0000192,3.56e-09,43;CL:0000514,3.56e-09,43;CL:0000393,6.96e-09,61;CL:0000211,6.96e-09,61;CL:0000115,9.09e-09,36;CL:0000359,3.94e-08,32;CL:0002078,2.15e-07,45 | |||
|ontology_enrichment_development_v019=CL:0002546;1.78e-09;18!CL:0000514;5.87e-07;43!CL:0000355;7.26e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!1.73e-21!216;UBERON:0003914!5.90e-21!118;UBERON:0003104!6.04e-21!238;UBERON:0009142!6.04e-21!238;UBERON:0005256!1.43e-19!143;UBERON:0000490!1.33e-17!138;UBERON:0000914!2.45e-17!83;UBERON:0002329!2.45e-17!83;UBERON:0003077!2.45e-17!83;UBERON:0003059!2.45e-17!83;UBERON:0007282!2.45e-17!83;UBERON:0009618!2.45e-17!83;UBERON:0007285!2.45e-17!83;UBERON:0000055!1.12e-16!69;UBERON:0004872!1.18e-16!84;UBERON:0001981!8.57e-16!60;UBERON:0007500!8.57e-16!60;UBERON:0004537!8.57e-16!60;UBERON:0006965!8.57e-16!60;UBERON:0002049!1.05e-15!79;UBERON:0007798!1.05e-15!79;UBERON:0000481!2.08e-15!347;UBERON:0000486!4.80e-15!82;UBERON:0004290!5.24e-15!70;UBERON:0001637!2.39e-13!42;UBERON:0003509!2.39e-13!42;UBERON:0004572!2.39e-13!42;UBERON:0000119!3.54e-13!312;UBERON:0000483!1.86e-12!309;UBERON:0000475!1.27e-11!365;UBERON:0000468!4.23e-11!659;UBERON:0004535!1.00e-10!110;UBERON:0001134!1.22e-10!61;UBERON:0002036!1.22e-10!61;UBERON:0003082!1.22e-10!61;UBERON:0004119!1.51e-10!169;UBERON:0000925!1.51e-10!169;UBERON:0006595!1.51e-10!169;UBERON:0000926!1.63e-10!448;UBERON:0004120!1.63e-10!448;UBERON:0006603!1.63e-10!448;UBERON:0003102!1.67e-10!95;UBERON:0002385!2.12e-10!63;UBERON:0001015!2.12e-10!63;UBERON:0000383!2.12e-10!63;UBERON:0001009!2.16e-10!113;UBERON:0004573!3.29e-10!33;UBERON:0004571!3.29e-10!33;UBERON:0001048!4.25e-10!168;UBERON:0000466!7.46e-10!126;UBERON:0000467!1.15e-09!625;UBERON:0000464!1.42e-09!104;UBERON:0000480!2.05e-09!626;UBERON:0000487!4.22e-09!22;UBERON:0001986!8.27e-09!18;UBERON:0004638!8.27e-09!18;UBERON:0004852!8.27e-09!18;UBERON:0001007!8.59e-09!155;UBERON:0001555!8.59e-09!155;UBERON:0007026!8.59e-09!155;UBERON:0004111!1.01e-08!241;UBERON:0003886!2.01e-08!63;UBERON:0000477!6.78e-08!286;UBERON:0000947!1.35e-07!21;UBERON:0010191!1.35e-07!21;UBERON:0002553!1.35e-07!70;UBERON:0000077!4.49e-07!130;UBERON:0006914!5.12e-07!25;UBERON:0003103!5.41e-07!69;UBERON:0002097!5.50e-07!40;UBERON:0002067!7.18e-07!9;UBERON:0004016!7.18e-07!9;UBERON:0010083!7.18e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.93e-10;42!UBERON:0003509;1.93e-10;42!UBERON:0004572;1.93e-10;42!UBERON:0003914;2.93e-10;74!UBERON:0007500;3.01e-10;56!UBERON:0001981;3.01e-10;56!UBERON:0004537;3.01e-10;56!UBERON:0004573;4.48e-10;33!UBERON:0004571;4.48e-10;33!UBERON:0000487;9.22e-10;22!UBERON:0004638;1.78e-09;18!UBERON:0001986;1.78e-09;18!UBERON:0004852;1.78e-09;18!UBERON:0000055;3.13e-09;65!UBERON:0000490;1.36e-08;33!UBERON:0000947;4.67e-08;21!UBERON:0010191;4.67e-08;21!UBERON:0002049;1.10e-07;75!UBERON:0007798;1.10e-07;75!UBERON:0006914;2.77e-07;25!UBERON:0000025;2.80e-07;93!UBERON:0002067;3.18e-07;9 | |||
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| ||
|short_description=p2@SMAGP | |||
}} | }} |
Latest revision as of 20:02, 18 September 2015
Short description: | p2@SMAGP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SMAGP_5end |
Coexpression cluster: | NA |
Association with transcript: | -64bp_to_ENST00000398453, NM_001033873, uc001ryd.1_5end |
EntrezGene: | SMAGP |
HGNC: | 26918 |
UniProt: | Q0VAQ4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 8.26e-17 | 250 |
mesodermal cell | 1.09e-14 | 121 |
epithelial cell | 4.53e-12 | 253 |
muscle precursor cell | 9.22e-12 | 58 |
myoblast | 9.22e-12 | 58 |
multi-potent skeletal muscle stem cell | 9.22e-12 | 58 |
muscle cell | 7.67e-11 | 55 |
endothelial cell of vascular tree | 6.96e-10 | 24 |
fibroblast | 1.54e-09 | 76 |
blood vessel endothelial cell | 2.77e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.77e-09 | 18 |
smooth muscle cell | 3.56e-09 | 43 |
smooth muscle myoblast | 3.56e-09 | 43 |
electrically responsive cell | 6.96e-09 | 61 |
electrically active cell | 6.96e-09 | 61 |
endothelial cell | 9.09e-09 | 36 |
vascular associated smooth muscle cell | 3.94e-08 | 32 |
meso-epithelial cell | 2.15e-07 | 45 |