FFCP PHASE1:Hg19::chr4:7941596..7941609,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=60312 | |EntrezGene=60312 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24017 | |HGNC=24017 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N556,E9PDT7,B4DMU2,Q6ZRV0 | |UniProt=Q8N556,E9PDT7,B4DMU2,Q6ZRV0 | ||
|association_with_transcript=43bp_to_ENST00000358461,ENST00000420658,NM_001134647,NM_198595,uc003gkg.1,uc011bwk.1_5end | |association_with_transcript=43bp_to_ENST00000358461,ENST00000420658,NM_001134647,NM_198595,uc003gkg.1,uc011bwk.1_5end | ||
|cluster_id=chr4:7941596..7941609,- | |||
|description=CAGE_peak_3_at_AFAP1_5end | |description=CAGE_peak_3_at_AFAP1_5end | ||
|id=chr4:7941596..7941609,- | |id=chr4:7941596..7941609,- | ||
|ontology_enrichment_celltype=CL:0000055!4.49e-22!180;CL:0000222!1.16e-17!119;CL:0000220!1.33e-14!246;CL:0002321!1.35e-14!248;CL:0000183!8.24e-14!59;CL:0000057!3.36e-13!75;CL:0000192!1.21e-12!42;CL:0000514!1.21e-12!42;CL:0000187!8.15e-12!54;CL:0000359!8.53e-12!32;CL:0000393!1.54e-11!60;CL:0000211!1.54e-11!60;CL:0000680!6.02e-11!57;CL:0000056!6.02e-11!57;CL:0000355!6.02e-11!57;CL:0000213!4.95e-07!57;CL:0000215!4.95e-07!57 | |ontology_enrichment_celltype=CL:0000055!4.49e-22!180;CL:0000222!1.16e-17!119;CL:0000220!1.33e-14!246;CL:0002321!1.35e-14!248;CL:0000183!8.24e-14!59;CL:0000057!3.36e-13!75;CL:0000192!1.21e-12!42;CL:0000514!1.21e-12!42;CL:0000187!8.15e-12!54;CL:0000359!8.53e-12!32;CL:0000393!1.54e-11!60;CL:0000211!1.54e-11!60;CL:0000680!6.02e-11!57;CL:0000056!6.02e-11!57;CL:0000355!6.02e-11!57;CL:0000213!4.95e-07!57;CL:0000215!4.95e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0000359;6.02e-12;32!CL:0000192;2.60e-10;43!CL:0000187;1.56e-07;55!CL:0002494;3.99e-07;16!CL:0000393;4.55e-07;61!CL:0000211;4.55e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,7.83e-19,121;CL:0000057,3.06e-14,76;CL:0000192,2.37e-13,43;CL:0000514,2.37e-13,43;CL:0002321,2.58e-13,250;CL:0000187,1.22e-12,55;CL:0000393,2.41e-12,61;CL:0000211,2.41e-12,61;CL:0000359,2.67e-12,32;CL:0000680,1.75e-11,58;CL:0000056,1.75e-11,58;CL:0000355,1.75e-11,58;CL:0000213,1.55e-07,58;CL:0000215,1.55e-07,58;CL:0002494,7.37e-07,16 | |||
|ontology_enrichment_development_v019=CL:0000514;2.60e-10;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!6.24e-20!79;UBERON:0007798!6.24e-20!79;UBERON:0003914!1.67e-18!118;UBERON:0000119!2.28e-18!312;UBERON:0004872!1.07e-17!84;UBERON:0000483!1.77e-17!309;UBERON:0000477!7.22e-17!286;UBERON:0004535!7.23e-17!110;UBERON:0001981!1.69e-16!60;UBERON:0007500!1.69e-16!60;UBERON:0004537!1.69e-16!60;UBERON:0006965!1.69e-16!60;UBERON:0001009!2.36e-16!113;UBERON:0000055!3.69e-16!69;UBERON:0000481!6.58e-16!347;UBERON:0000468!6.07e-15!659;UBERON:0001637!8.59e-15!42;UBERON:0003509!8.59e-15!42;UBERON:0004572!8.59e-15!42;UBERON:0004111!3.24e-14!241;UBERON:0000025!3.47e-14!194;UBERON:0000475!1.09e-12!365;UBERON:0000467!2.95e-12!625;UBERON:0000480!5.73e-12!626;UBERON:0004573!8.31e-12!33;UBERON:0004571!8.31e-12!33;UBERON:0000490!1.01e-11!138;UBERON:0005256!3.37e-11!143;UBERON:0003104!6.16e-10!238;UBERON:0009142!6.16e-10!238;UBERON:0002385!1.07e-09!63;UBERON:0001015!1.07e-09!63;UBERON:0000383!1.07e-09!63;UBERON:0002100!1.09e-09!216;UBERON:0000922!1.26e-09!612;UBERON:0004290!1.72e-09!70;UBERON:0002050!1.86e-09!605;UBERON:0005423!1.86e-09!605;UBERON:0001134!1.87e-09!61;UBERON:0002036!1.87e-09!61;UBERON:0003082!1.87e-09!61;UBERON:0000923!3.19e-09!604;UBERON:0005291!3.19e-09!604;UBERON:0006598!3.19e-09!604;UBERON:0002532!3.19e-09!604;UBERON:0000064!4.31e-09!219;UBERON:0001048!5.79e-09!168;UBERON:0000486!6.39e-09!82;UBERON:0000914!8.98e-09!83;UBERON:0002329!8.98e-09!83;UBERON:0003077!8.98e-09!83;UBERON:0003059!8.98e-09!83;UBERON:0007282!8.98e-09!83;UBERON:0009618!8.98e-09!83;UBERON:0007285!8.98e-09!83;UBERON:0003886!8.81e-08!63;UBERON:0000947!1.07e-07!21;UBERON:0010191!1.07e-07!21;UBERON:0000948!5.15e-07!24;UBERON:0005498!5.15e-07!24;UBERON:0004140!5.15e-07!24;UBERON:0009881!5.15e-07!24;UBERON:0004141!5.15e-07!24;UBERON:0003084!5.15e-07!24;UBERON:0007005!5.15e-07!24;UBERON:0004139!5.15e-07!24;UBERON:0004291!5.15e-07!24;UBERON:0002553!8.42e-07!70 | |ontology_enrichment_uberon=UBERON:0002049!6.24e-20!79;UBERON:0007798!6.24e-20!79;UBERON:0003914!1.67e-18!118;UBERON:0000119!2.28e-18!312;UBERON:0004872!1.07e-17!84;UBERON:0000483!1.77e-17!309;UBERON:0000477!7.22e-17!286;UBERON:0004535!7.23e-17!110;UBERON:0001981!1.69e-16!60;UBERON:0007500!1.69e-16!60;UBERON:0004537!1.69e-16!60;UBERON:0006965!1.69e-16!60;UBERON:0001009!2.36e-16!113;UBERON:0000055!3.69e-16!69;UBERON:0000481!6.58e-16!347;UBERON:0000468!6.07e-15!659;UBERON:0001637!8.59e-15!42;UBERON:0003509!8.59e-15!42;UBERON:0004572!8.59e-15!42;UBERON:0004111!3.24e-14!241;UBERON:0000025!3.47e-14!194;UBERON:0000475!1.09e-12!365;UBERON:0000467!2.95e-12!625;UBERON:0000480!5.73e-12!626;UBERON:0004573!8.31e-12!33;UBERON:0004571!8.31e-12!33;UBERON:0000490!1.01e-11!138;UBERON:0005256!3.37e-11!143;UBERON:0003104!6.16e-10!238;UBERON:0009142!6.16e-10!238;UBERON:0002385!1.07e-09!63;UBERON:0001015!1.07e-09!63;UBERON:0000383!1.07e-09!63;UBERON:0002100!1.09e-09!216;UBERON:0000922!1.26e-09!612;UBERON:0004290!1.72e-09!70;UBERON:0002050!1.86e-09!605;UBERON:0005423!1.86e-09!605;UBERON:0001134!1.87e-09!61;UBERON:0002036!1.87e-09!61;UBERON:0003082!1.87e-09!61;UBERON:0000923!3.19e-09!604;UBERON:0005291!3.19e-09!604;UBERON:0006598!3.19e-09!604;UBERON:0002532!3.19e-09!604;UBERON:0000064!4.31e-09!219;UBERON:0001048!5.79e-09!168;UBERON:0000486!6.39e-09!82;UBERON:0000914!8.98e-09!83;UBERON:0002329!8.98e-09!83;UBERON:0003077!8.98e-09!83;UBERON:0003059!8.98e-09!83;UBERON:0007282!8.98e-09!83;UBERON:0009618!8.98e-09!83;UBERON:0007285!8.98e-09!83;UBERON:0003886!8.81e-08!63;UBERON:0000947!1.07e-07!21;UBERON:0010191!1.07e-07!21;UBERON:0000948!5.15e-07!24;UBERON:0005498!5.15e-07!24;UBERON:0004140!5.15e-07!24;UBERON:0009881!5.15e-07!24;UBERON:0004141!5.15e-07!24;UBERON:0003084!5.15e-07!24;UBERON:0007005!5.15e-07!24;UBERON:0004139!5.15e-07!24;UBERON:0004291!5.15e-07!24;UBERON:0002553!8.42e-07!70 | ||
|ontology_enrichment_uberon_v019=UBERON:0001637;4.96e-11;42!UBERON:0003509;4.96e-11;42!UBERON:0004572;4.96e-11;42!UBERON:0004573;5.12e-11;33!UBERON:0004571;5.12e-11;33!UBERON:0007500;1.93e-09;56!UBERON:0001981;1.93e-09;56!UBERON:0004537;1.93e-09;56!UBERON:0002049;2.01e-08;75!UBERON:0007798;2.01e-08;75!UBERON:0000947;4.83e-08;21!UBERON:0010191;4.83e-08;21!UBERON:0003914;8.19e-08;74!UBERON:0000055;1.41e-07;65!UBERON:0000948;6.27e-07;22 | |||
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| ||
|short_description=p3@AFAP1 | |short_description=p3@AFAP1 | ||
}} | }} |
Latest revision as of 20:25, 18 September 2015
Short description: | p3@AFAP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_AFAP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 43bp_to_ENST00000358461, ENST00000420658, NM_001134647, NM_198595, uc003gkg.1, uc011bwk.1_5end |
EntrezGene: | AFAP1 |
HGNC: | 24017 |
UniProt: | Q8N556E9PDT7B4DMU2Q6ZRV0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 7.83e-19 | 121 |
fibroblast | 3.06e-14 | 76 |
smooth muscle cell | 2.37e-13 | 43 |
smooth muscle myoblast | 2.37e-13 | 43 |
embryonic cell | 2.58e-13 | 250 |
muscle cell | 1.22e-12 | 55 |
electrically responsive cell | 2.41e-12 | 61 |
electrically active cell | 2.41e-12 | 61 |
vascular associated smooth muscle cell | 2.67e-12 | 32 |
muscle precursor cell | 1.75e-11 | 58 |
myoblast | 1.75e-11 | 58 |
multi-potent skeletal muscle stem cell | 1.75e-11 | 58 |
lining cell | 1.55e-07 | 58 |
barrier cell | 1.55e-07 | 58 |
cardiocyte | 7.37e-07 | 16 |