FFCP PHASE1:Hg19::chr15:74218787..74218813,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4016 | |EntrezGene=4016 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6665 | |HGNC=6665 | ||
|TSSclassifier=strong | |||
|UniProt=Q08397 | |UniProt=Q08397 | ||
|association_with_transcript=0bp_to_ENST00000261921,ENST00000395162,NM_005576,uc002awc.1_5end | |association_with_transcript=0bp_to_ENST00000261921,ENST00000395162,NM_005576,uc002awc.1_5end | ||
|cluster_id=chr15:74218787..74218813,+ | |||
|coexpression_cluster_id=C589 | |coexpression_cluster_id=C589 | ||
|description=CAGE_peak_1_at_LOXL1_5end | |description=CAGE_peak_1_at_LOXL1_5end | ||
|id=chr15:74218787..74218813,+ | |id=chr15:74218787..74218813,+ | ||
|ontology_enrichment_celltype=CL:0000055!4.46e-49!180;CL:0000057!1.25e-22!75;CL:0000183!1.27e-20!59;CL:0000680!1.99e-20!57;CL:0000056!1.99e-20!57;CL:0000355!1.99e-20!57;CL:0000187!2.80e-19!54;CL:0000393!1.60e-17!60;CL:0000211!1.60e-17!60;CL:0000192!2.55e-15!42;CL:0000514!2.55e-15!42;CL:0002321!2.66e-14!248;CL:0000220!2.93e-14!246;CL:0000222!5.88e-14!119;CL:0000359!2.83e-13!32;CL:0000133!3.10e-08!59;CL:0002620!4.26e-08!23;CL:0000144!4.29e-08!625;CL:0000221!5.14e-08!71;CL:0002494!2.61e-07!16;CL:0002371!7.86e-07!591 | |ontology_enrichment_celltype=CL:0000055!4.46e-49!180;CL:0000057!1.25e-22!75;CL:0000183!1.27e-20!59;CL:0000680!1.99e-20!57;CL:0000056!1.99e-20!57;CL:0000355!1.99e-20!57;CL:0000187!2.80e-19!54;CL:0000393!1.60e-17!60;CL:0000211!1.60e-17!60;CL:0000192!2.55e-15!42;CL:0000514!2.55e-15!42;CL:0002321!2.66e-14!248;CL:0000220!2.93e-14!246;CL:0000222!5.88e-14!119;CL:0000359!2.83e-13!32;CL:0000133!3.10e-08!59;CL:0002620!4.26e-08!23;CL:0000144!4.29e-08!625;CL:0000221!5.14e-08!71;CL:0002494!2.61e-07!16;CL:0002371!7.86e-07!591 | ||
|ontology_enrichment_celltype_v019=CL:0000359;8.10e-13;32!CL:0000192;5.79e-12;43!CL:0000187;3.32e-11;55!CL:0000393;1.35e-09;61!CL:0000211;1.35e-09;61!CL:0000057;2.75e-09;73!CL:0002620;3.31e-08;23!CL:0000134;3.83e-08;55!CL:0000723;4.22e-08;61!CL:0000048;6.80e-08;58!CL:0002320;7.09e-08;188!CL:0002494;2.04e-07;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.35e-23,76;CL:0000680,2.43e-21,58;CL:0000056,2.43e-21,58;CL:0000355,2.43e-21,58;CL:0000187,3.61e-20,55;CL:0000393,2.34e-18,61;CL:0000211,2.34e-18,61;CL:0000192,3.94e-16,43;CL:0000514,3.94e-16,43;CL:0002321,8.18e-14,250;CL:0000359,1.77e-13,32;CL:0000222,2.15e-13,121;CL:0000221,1.47e-08,72;CL:0000133,2.15e-08,59;CL:0002620,3.28e-08,23;CL:0002494,2.07e-07,16 | |||
|ontology_enrichment_development_v019=CL:0000514;5.79e-12;43!CL:0000355;2.50e-11;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!7.43e-24!83;UBERON:0002329!7.43e-24!83;UBERON:0003077!7.43e-24!83;UBERON:0003059!7.43e-24!83;UBERON:0007282!7.43e-24!83;UBERON:0009618!7.43e-24!83;UBERON:0007285!7.43e-24!83;UBERON:0004290!6.16e-22!70;UBERON:0000486!3.68e-20!82;UBERON:0001134!1.19e-19!61;UBERON:0002036!1.19e-19!61;UBERON:0003082!1.19e-19!61;UBERON:0002385!2.06e-19!63;UBERON:0001015!2.06e-19!63;UBERON:0000383!2.06e-19!63;UBERON:0005256!7.08e-18!143;UBERON:0000475!2.19e-17!365;UBERON:0002100!3.94e-13!216;UBERON:0000481!5.94e-13!347;UBERON:0004872!1.01e-12!84;UBERON:0001637!2.15e-11!42;UBERON:0003509!2.15e-11!42;UBERON:0004572!2.15e-11!42;UBERON:0000119!2.61e-11!312;UBERON:0000468!3.59e-11!659;UBERON:0002049!4.50e-11!79;UBERON:0007798!4.50e-11!79;UBERON:0000483!5.70e-11!309;UBERON:0003914!1.69e-10!118;UBERON:0004573!6.12e-10!33;UBERON:0004571!6.12e-10!33;UBERON:0003104!9.26e-10!238;UBERON:0009142!9.26e-10!238;UBERON:0000490!1.39e-09!138;UBERON:0003102!6.19e-09!95;UBERON:0001981!7.26e-09!60;UBERON:0007500!7.26e-09!60;UBERON:0004537!7.26e-09!60;UBERON:0006965!7.26e-09!60;UBERON:0002199!8.74e-09!45;UBERON:0002416!8.74e-09!45;UBERON:0001009!2.86e-08!113;UBERON:0004535!4.79e-08!110;UBERON:0000055!1.04e-07!69;UBERON:0007100!1.08e-07!27;UBERON:0000948!1.15e-07!24;UBERON:0005498!1.15e-07!24;UBERON:0004140!1.15e-07!24;UBERON:0009881!1.15e-07!24;UBERON:0004141!1.15e-07!24;UBERON:0003084!1.15e-07!24;UBERON:0007005!1.15e-07!24;UBERON:0004139!1.15e-07!24;UBERON:0004291!1.15e-07!24;UBERON:0000467!2.15e-07!625;UBERON:0002097!2.76e-07!40;UBERON:0000480!3.46e-07!626 | |ontology_enrichment_uberon=UBERON:0000914!7.43e-24!83;UBERON:0002329!7.43e-24!83;UBERON:0003077!7.43e-24!83;UBERON:0003059!7.43e-24!83;UBERON:0007282!7.43e-24!83;UBERON:0009618!7.43e-24!83;UBERON:0007285!7.43e-24!83;UBERON:0004290!6.16e-22!70;UBERON:0000486!3.68e-20!82;UBERON:0001134!1.19e-19!61;UBERON:0002036!1.19e-19!61;UBERON:0003082!1.19e-19!61;UBERON:0002385!2.06e-19!63;UBERON:0001015!2.06e-19!63;UBERON:0000383!2.06e-19!63;UBERON:0005256!7.08e-18!143;UBERON:0000475!2.19e-17!365;UBERON:0002100!3.94e-13!216;UBERON:0000481!5.94e-13!347;UBERON:0004872!1.01e-12!84;UBERON:0001637!2.15e-11!42;UBERON:0003509!2.15e-11!42;UBERON:0004572!2.15e-11!42;UBERON:0000119!2.61e-11!312;UBERON:0000468!3.59e-11!659;UBERON:0002049!4.50e-11!79;UBERON:0007798!4.50e-11!79;UBERON:0000483!5.70e-11!309;UBERON:0003914!1.69e-10!118;UBERON:0004573!6.12e-10!33;UBERON:0004571!6.12e-10!33;UBERON:0003104!9.26e-10!238;UBERON:0009142!9.26e-10!238;UBERON:0000490!1.39e-09!138;UBERON:0003102!6.19e-09!95;UBERON:0001981!7.26e-09!60;UBERON:0007500!7.26e-09!60;UBERON:0004537!7.26e-09!60;UBERON:0006965!7.26e-09!60;UBERON:0002199!8.74e-09!45;UBERON:0002416!8.74e-09!45;UBERON:0001009!2.86e-08!113;UBERON:0004535!4.79e-08!110;UBERON:0000055!1.04e-07!69;UBERON:0007100!1.08e-07!27;UBERON:0000948!1.15e-07!24;UBERON:0005498!1.15e-07!24;UBERON:0004140!1.15e-07!24;UBERON:0009881!1.15e-07!24;UBERON:0004141!1.15e-07!24;UBERON:0003084!1.15e-07!24;UBERON:0007005!1.15e-07!24;UBERON:0004139!1.15e-07!24;UBERON:0004291!1.15e-07!24;UBERON:0000467!2.15e-07!625;UBERON:0002097!2.76e-07!40;UBERON:0000480!3.46e-07!626 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;9.79e-09;33!UBERON:0004571;9.79e-09;33!UBERON:0002385;1.24e-08;31!UBERON:0001015;1.24e-08;31!UBERON:0000383;1.24e-08;31!UBERON:0002384;3.25e-08;198!UBERON:0001637;7.68e-08;42!UBERON:0003509;7.68e-08;42!UBERON:0004572;7.68e-08;42!UBERON:0002204;9.95e-08;70!UBERON:0007100;6.01e-07;25!UBERON:0000948;6.72e-07;22 | |||
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| ||
|short_description=p1@LOXL1 | |short_description=p1@LOXL1 | ||
}} | }} |
Latest revision as of 23:57, 18 September 2015
Short description: | p1@LOXL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOXL1_5end |
Coexpression cluster: | C589_Mesenchymal_Smooth_Fibroblast_Osteoblast_tenocyte_Preadipocyte_Synoviocyte |
Association with transcript: | 0bp_to_ENST00000261921, ENST00000395162, NM_005576, uc002awc.1_5end |
EntrezGene: | LOXL1 |
HGNC: | 6665 |
UniProt: | Q08397 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.35e-23 | 76 |
muscle precursor cell | 2.43e-21 | 58 |
myoblast | 2.43e-21 | 58 |
multi-potent skeletal muscle stem cell | 2.43e-21 | 58 |
muscle cell | 3.61e-20 | 55 |
electrically responsive cell | 2.34e-18 | 61 |
electrically active cell | 2.34e-18 | 61 |
smooth muscle cell | 3.94e-16 | 43 |
smooth muscle myoblast | 3.94e-16 | 43 |
embryonic cell | 8.18e-14 | 250 |
vascular associated smooth muscle cell | 1.77e-13 | 32 |
mesodermal cell | 2.15e-13 | 121 |
ectodermal cell | 1.47e-08 | 72 |
neurectodermal cell | 2.15e-08 | 59 |
skin fibroblast | 3.28e-08 | 23 |
cardiocyte | 2.07e-07 | 16 |