FFCP PHASE1:Hg19::chr15:74218787..74218813,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4016 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6665 | |||
|TSSclassifier=strong | |||
|UniProt=Q08397 | |||
|association_with_transcript=0bp_to_ENST00000261921,ENST00000395162,NM_005576,uc002awc.1_5end | |||
|cluster_id=chr15:74218787..74218813,+ | |||
|coexpression_cluster_id=C589 | |||
|description=CAGE_peak_1_at_LOXL1_5end | |||
|id=chr15:74218787..74218813,+ | |||
|ontology_enrichment_celltype=CL:0000055!4.46e-49!180;CL:0000057!1.25e-22!75;CL:0000183!1.27e-20!59;CL:0000680!1.99e-20!57;CL:0000056!1.99e-20!57;CL:0000355!1.99e-20!57;CL:0000187!2.80e-19!54;CL:0000393!1.60e-17!60;CL:0000211!1.60e-17!60;CL:0000192!2.55e-15!42;CL:0000514!2.55e-15!42;CL:0002321!2.66e-14!248;CL:0000220!2.93e-14!246;CL:0000222!5.88e-14!119;CL:0000359!2.83e-13!32;CL:0000133!3.10e-08!59;CL:0002620!4.26e-08!23;CL:0000144!4.29e-08!625;CL:0000221!5.14e-08!71;CL:0002494!2.61e-07!16;CL:0002371!7.86e-07!591 | |||
|ontology_enrichment_celltype_v019=CL:0000359;8.10e-13;32!CL:0000192;5.79e-12;43!CL:0000187;3.32e-11;55!CL:0000393;1.35e-09;61!CL:0000211;1.35e-09;61!CL:0000057;2.75e-09;73!CL:0002620;3.31e-08;23!CL:0000134;3.83e-08;55!CL:0000723;4.22e-08;61!CL:0000048;6.80e-08;58!CL:0002320;7.09e-08;188!CL:0002494;2.04e-07;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.35e-23,76;CL:0000680,2.43e-21,58;CL:0000056,2.43e-21,58;CL:0000355,2.43e-21,58;CL:0000187,3.61e-20,55;CL:0000393,2.34e-18,61;CL:0000211,2.34e-18,61;CL:0000192,3.94e-16,43;CL:0000514,3.94e-16,43;CL:0002321,8.18e-14,250;CL:0000359,1.77e-13,32;CL:0000222,2.15e-13,121;CL:0000221,1.47e-08,72;CL:0000133,2.15e-08,59;CL:0002620,3.28e-08,23;CL:0002494,2.07e-07,16 | |||
|ontology_enrichment_development_v019=CL:0000514;5.79e-12;43!CL:0000355;2.50e-11;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!7.43e-24!83;UBERON:0002329!7.43e-24!83;UBERON:0003077!7.43e-24!83;UBERON:0003059!7.43e-24!83;UBERON:0007282!7.43e-24!83;UBERON:0009618!7.43e-24!83;UBERON:0007285!7.43e-24!83;UBERON:0004290!6.16e-22!70;UBERON:0000486!3.68e-20!82;UBERON:0001134!1.19e-19!61;UBERON:0002036!1.19e-19!61;UBERON:0003082!1.19e-19!61;UBERON:0002385!2.06e-19!63;UBERON:0001015!2.06e-19!63;UBERON:0000383!2.06e-19!63;UBERON:0005256!7.08e-18!143;UBERON:0000475!2.19e-17!365;UBERON:0002100!3.94e-13!216;UBERON:0000481!5.94e-13!347;UBERON:0004872!1.01e-12!84;UBERON:0001637!2.15e-11!42;UBERON:0003509!2.15e-11!42;UBERON:0004572!2.15e-11!42;UBERON:0000119!2.61e-11!312;UBERON:0000468!3.59e-11!659;UBERON:0002049!4.50e-11!79;UBERON:0007798!4.50e-11!79;UBERON:0000483!5.70e-11!309;UBERON:0003914!1.69e-10!118;UBERON:0004573!6.12e-10!33;UBERON:0004571!6.12e-10!33;UBERON:0003104!9.26e-10!238;UBERON:0009142!9.26e-10!238;UBERON:0000490!1.39e-09!138;UBERON:0003102!6.19e-09!95;UBERON:0001981!7.26e-09!60;UBERON:0007500!7.26e-09!60;UBERON:0004537!7.26e-09!60;UBERON:0006965!7.26e-09!60;UBERON:0002199!8.74e-09!45;UBERON:0002416!8.74e-09!45;UBERON:0001009!2.86e-08!113;UBERON:0004535!4.79e-08!110;UBERON:0000055!1.04e-07!69;UBERON:0007100!1.08e-07!27;UBERON:0000948!1.15e-07!24;UBERON:0005498!1.15e-07!24;UBERON:0004140!1.15e-07!24;UBERON:0009881!1.15e-07!24;UBERON:0004141!1.15e-07!24;UBERON:0003084!1.15e-07!24;UBERON:0007005!1.15e-07!24;UBERON:0004139!1.15e-07!24;UBERON:0004291!1.15e-07!24;UBERON:0000467!2.15e-07!625;UBERON:0002097!2.76e-07!40;UBERON:0000480!3.46e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;9.79e-09;33!UBERON:0004571;9.79e-09;33!UBERON:0002385;1.24e-08;31!UBERON:0001015;1.24e-08;31!UBERON:0000383;1.24e-08;31!UBERON:0002384;3.25e-08;198!UBERON:0001637;7.68e-08;42!UBERON:0003509;7.68e-08;42!UBERON:0004572;7.68e-08;42!UBERON:0002204;9.95e-08;70!UBERON:0007100;6.01e-07;25!UBERON:0000948;6.72e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,6.47e-23,73;UBERON:0002329,7.17e-23,71;UBERON:0003059,7.17e-23,71;UBERON:0007282,7.17e-23,71;UBERON:0004290,7.17e-23,71;UBERON:0009618,7.17e-23,71;UBERON:0003077,2.34e-22,72;UBERON:0007285,2.34e-22,72;UBERON:0007503,2.71e-22,78;UBERON:0000486,8.38e-21,83;UBERON:0001134,1.54e-20,62;UBERON:0002036,1.54e-20,62;UBERON:0003082,1.54e-20,62;UBERON:0002385,2.72e-20,64;UBERON:0001015,2.72e-20,64;UBERON:0000383,2.72e-20,64;UBERON:0003104,7.15e-17,160;UBERON:0009142,7.15e-17,160;UBERON:0005256,1.49e-14,122;UBERON:0004872,3.34e-12,83;UBERON:0001637,3.44e-11,42;UBERON:0003509,3.44e-11,42;UBERON:0004572,3.44e-11,42;UBERON:0002100,4.62e-11,199;UBERON:0000490,4.85e-11,148;UBERON:0000119,7.50e-11,309;UBERON:0000483,1.62e-10,306;UBERON:0002049,1.63e-10,78;UBERON:0007798,1.63e-10,78;UBERON:0004573,1.07e-09,33;UBERON:0004571,1.07e-09,33;UBERON:0002199,1.36e-09,46;UBERON:0002416,1.36e-09,46;UBERON:0003914,1.79e-09,117;UBERON:0003102,2.33e-09,99;UBERON:0001009,2.59e-08,112;UBERON:0007500,2.82e-08,59;UBERON:0001981,2.82e-08,59;UBERON:0004537,2.82e-08,59;UBERON:0006965,2.82e-08,59;UBERON:0004535,4.37e-08,109;UBERON:0002097,4.88e-08,41;UBERON:0007100,8.47e-08,27;UBERON:0000948,9.02e-08,24;UBERON:0005498,9.02e-08,24;UBERON:0004140,9.02e-08,24;UBERON:0009881,9.02e-08,24;UBERON:0004141,9.02e-08,24;UBERON:0003084,9.02e-08,24;UBERON:0007005,9.02e-08,24;UBERON:0004139,9.02e-08,24;UBERON:0004291,9.02e-08,24;UBERON:0000055,3.21e-07,68 | |||
|phase1_expression=64.314146261777,56.0943372594376,67.3762051578742,66.0483769130661,50.9535647647108,147.425210572962,48.126976851979,80.2284239252075,66.6023351909588,5.40614660303319,6.97801167972428,12.0142754671595,26.6404648010738,199.758893677515,166.030085239686,100.176446821315,97.0338190118603,92.019071388809,99.0503581544729,123.244179134865,169.728575115218,195.595746202327,77.2837165253853,107.309549257141,94.6591502544813,0,0,0,0,0,3.09632246632152,1.83884244895785,5.4217065380085,6.65557218300218,0,0,2.05520307534393,1.10799081706375,0,0.217010870715852,0.671746422719773,0.647787332037959,1.80302897343931,0,0.377875943688809,0.485168122375632,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,1.27867425159808,0,0,0,0.251248665256743,0.521482918420201,0,3.63239701580021,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,1.05353633910031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,70.7039912310489,122.067556466062,55.6202144019357,54.2158728576849,106.283637054809,102.551335424263,27.0397221997374,57.9095495660137,46.1329907760651,84.0354416383117,61.6600195565745,8.44815036960246,11.6574492253614,4.82019775619758,0,0,0,0,0,0,0.39752481473341,9.46258054616737,5.9013885273291,0.56530794192401,7.97048928798821,4.12677062910101,3.9709043641994,1.55050055501597,1.42306505074684,2.67776490211736,0.402829317109147,0.760272105718513,3.41686880567437,1.10298924103761,9.72170337458112,1.69669483739752,3.36794058939255,1.0135033243499,6.13266549863533,1.89853131913626,7.14486801328588,1.31780417436063,7.75560528296651,6.54141078213801,155.055248928939,140.306606924354,57.5979936537502,248.400513568473,163.502124193443,137.926689635008,108.883975644299,132.953808596849,51.0386098055617,36.6413028029552,42.8270186157262,115.485717293083,175.7336569664,24.8380717743824,40.5808099879417,10.2684927878001,42.5928739572633,32.5293561243229,26.2234169876373,27.2474565002362,40.218371737214,83.7730044066258,87.4136108746976,79.5961914378976,84.5652898132664,68.262102145352,215.585442544872,28.7854754861453,53.0502524257128,19.671552199377,113.256226187256,108.803167508652,53.4847489707485,67.2652846138925,107.633781413317,146.927483507174,121.860843166748,111.933978839482,63.9956206570706,49.9822647688521,113.159048649607,137.721487108873,93.8318359702343,50.4867548488229,149.028785901883,132.549766591426,193.480227921555,85.135523002356,124.796595940519,1.93260853163297,3.81844568827169,1.72082757233402,7.68434348616451,10.0722623924329,11.6193942869518,19.0736341228282,10.5974757367764,8.75945661781992,228.416317201531,248.934243080647,162.999207195927,171.816133371832,166.032280784005,1.53798840051797,0.505754070234305,0.964044119533928,1.32352767278873,0.653638332277218,1.18635309555548,0.674156540800822,0.588664395376038,0.769494313892781,2.21446636387394,67.316051425654,46.9194372917796,114.666794880723,0,0,1.18157981336281,0,0.491953754172454,49.5830971762739,14.2675371031213,1.1240175325762,3.61904300681871,14.4437974447306,8.79682424337877,24.9584348467099,63.5057904911202,62.7183490915166,122.22245069949,4.04226053731007,1.85194205030644,1.52203321787679,7.11183958163348,6.00940313466411,0,0,0,2.81201501960331,16.4622485634882,2.97727704209012,3.04498977189684,4.94077695473735,9.20118429996507,0,0,0,0.288239906833923,0.50496973370552,1.26995788584338,0,2.34434894420094,22.2394179829517,4.73006466435288,5.70651809903443,1.14330573052231,21.5291681943093,37.4925659196621,20.3880434582241,66.9627487625289,668.81755374302,27.894990834348,66.2185910296327,57.2040903012513,44.4968757473506,29.7883177248884,66.0727003959926,39.1759702623324,40.6966204043582,20.5810084195192,20.847115794799,43.3578177465906,15.0470855857352,34.966967738912,30.5036710510103,47.0872788467489,0,0,0,121.250176878741,155.063613376054,175.443393200084,73.1145598671275,121.025553982176,91.3210912523467,0,0,0,0.128343036279748,25.9176516706913,20.8223766172195,6.95959931499926,13.0662686960792,10.2070200264506,1.49801404789436,2.99161459204025,0.414415513436035,186.368375921373,323.610327125611,113.931309953889,181.350591254864,198.413035542444,197.60112603752,289.339295032002,312.6829976171,316.096430637819,177.973682623108,176.684009210426,232.673890699629,100.698109168508,253.954101229175,193.876034453134,0,0,0,6.36567900037145,21.6366071363646,34.4724934395836,90.3112420460348,55.3997723569905,84.7593485187882,96.6169185387985,79.314623605339,147.503045688688,146.933885780541,91.1379290373694,157.142126902117,76.4603822488563,121.505536428967,57.6403477161398,1.93375119346596,13.6344399806234,5.52485933615378,33.4110044159006,86.6753959711973,99.7856797841218,18.0479845162965,21.7953404005494,83.9254253019235,54.0715131217065,38.7374478036854,1.13733384070897,1.70093705276516,13.8186186305369,23.1340879035434,37.9325012561394,139.469757131649,2.03901018436031,7.47968408035852,52.6105673597119,0,0,46.9303728962992,128.253726468585,87.8521665593618,4.53380451249978,6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| |||
|short_description=p1@LOXL1 | |||
}} |
Latest revision as of 23:57, 18 September 2015
Short description: | p1@LOXL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOXL1_5end |
Coexpression cluster: | C589_Mesenchymal_Smooth_Fibroblast_Osteoblast_tenocyte_Preadipocyte_Synoviocyte |
Association with transcript: | 0bp_to_ENST00000261921, ENST00000395162, NM_005576, uc002awc.1_5end |
EntrezGene: | LOXL1 |
HGNC: | 6665 |
UniProt: | Q08397 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.35e-23 | 76 |
muscle precursor cell | 2.43e-21 | 58 |
myoblast | 2.43e-21 | 58 |
multi-potent skeletal muscle stem cell | 2.43e-21 | 58 |
muscle cell | 3.61e-20 | 55 |
electrically responsive cell | 2.34e-18 | 61 |
electrically active cell | 2.34e-18 | 61 |
smooth muscle cell | 3.94e-16 | 43 |
smooth muscle myoblast | 3.94e-16 | 43 |
embryonic cell | 8.18e-14 | 250 |
vascular associated smooth muscle cell | 1.77e-13 | 32 |
mesodermal cell | 2.15e-13 | 121 |
ectodermal cell | 1.47e-08 | 72 |
neurectodermal cell | 2.15e-08 | 59 |
skin fibroblast | 3.28e-08 | 23 |
cardiocyte | 2.07e-07 | 16 |