FFCP PHASE1:Hg19::chr5:83680363..83680372,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10085 | |EntrezGene=10085 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3173 | |HGNC=3173 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-159bp_to_ENST00000380138_5end | |association_with_transcript=-159bp_to_ENST00000380138_5end | ||
|cluster_id=chr5:83680363..83680372,- | |||
|coexpression_cluster_id=C4526 | |coexpression_cluster_id=C4526 | ||
|description=CAGE_peak_9_at_EDIL3_5end | |description=CAGE_peak_9_at_EDIL3_5end | ||
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|ontology_enrichment_celltype=CL:0000055!2.91e-18!180;CL:0000359!1.29e-09!32;CL:0000057!6.05e-09!75;CL:0000192!5.97e-08!42;CL:0000514!5.97e-08!42;CL:0000680!3.66e-07!57;CL:0000056!3.66e-07!57;CL:0000355!3.66e-07!57;CL:0000187!8.04e-07!54 | |ontology_enrichment_celltype=CL:0000055!2.91e-18!180;CL:0000359!1.29e-09!32;CL:0000057!6.05e-09!75;CL:0000192!5.97e-08!42;CL:0000514!5.97e-08!42;CL:0000680!3.66e-07!57;CL:0000056!3.66e-07!57;CL:0000355!3.66e-07!57;CL:0000187!8.04e-07!54 | ||
|ontology_enrichment_celltype_v019=CL:0000359;4.14e-12;32!CL:1000306;8.60e-07;4!CL:0002547;8.60e-07;4 | |ontology_enrichment_celltype_v019=CL:0000359;4.14e-12;32!CL:1000306;8.60e-07;4!CL:0002547;8.60e-07;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000359,8.56e-13,32;CL:0000057,3.17e-10,76;CL:0000192,3.52e-08,43;CL:0000514,3.52e-08,43;CL:0000680,4.93e-07,58;CL:0000056,4.93e-07,58;CL:0000355,4.93e-07,58;CL:1000306,5.83e-07,4;CL:0002547,5.83e-07,4;CL:0000187,8.13e-07,55 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2394!9.38e-08!14 | |ontology_enrichment_disease=DOID:2394!9.38e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;7.16e-08;14!DOID:17;4.64e-07;5!DOID:450;4.64e-07;5!DOID:66;4.64e-07;5!DOID:423;4.64e-07;5!DOID:0080000;4.64e-07;5!DOID:11722;4.64e-07;5 | |ontology_enrichment_disease_v019=DOID:2394;7.16e-08;14!DOID:17;4.64e-07;5!DOID:450;4.64e-07;5!DOID:66;4.64e-07;5!DOID:423;4.64e-07;5!DOID:0080000;4.64e-07;5!DOID:11722;4.64e-07;5 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,1.14e-07,14;DOID:17,2.28e-07,5;DOID:450,2.28e-07,5;DOID:66,2.28e-07,5;DOID:423,2.28e-07,5;DOID:0080000,2.28e-07,5;DOID:11722,2.28e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0000955!1.02e-17!69;UBERON:0006238!1.02e-17!69;UBERON:0002616!1.68e-17!59;UBERON:0001017!1.07e-16!82;UBERON:0005743!1.55e-15!86;UBERON:0001049!2.69e-15!57;UBERON:0005068!2.69e-15!57;UBERON:0006241!2.69e-15!57;UBERON:0007135!2.69e-15!57;UBERON:0002346!6.35e-15!90;UBERON:0003075!1.23e-14!86;UBERON:0007284!1.23e-14!86;UBERON:0000073!6.10e-14!94;UBERON:0001016!6.10e-14!94;UBERON:0000475!1.85e-13!365;UBERON:0001893!3.01e-13!34;UBERON:0002780!3.52e-13!41;UBERON:0001890!3.52e-13!41;UBERON:0006240!3.52e-13!41;UBERON:0000025!4.45e-13!194;UBERON:0002020!9.13e-13!34;UBERON:0003528!9.13e-13!34;UBERON:0002791!1.34e-12!33;UBERON:0003080!1.42e-12!42;UBERON:0001869!2.11e-12!32;UBERON:0000477!6.95e-11!286;UBERON:0000033!1.48e-10!123;UBERON:0000119!2.97e-10!312;UBERON:0003056!6.11e-10!61;UBERON:0000483!1.49e-09!309;UBERON:0000924!1.71e-09!173;UBERON:0006601!1.71e-09!173;UBERON:0000153!1.74e-09!129;UBERON:0007811!1.74e-09!129;UBERON:0000956!3.23e-09!25;UBERON:0000203!3.23e-09!25;UBERON:0004121!3.72e-09!169;UBERON:0007023!6.21e-09!115;UBERON:0002619!1.64e-08!22;UBERON:0000481!3.00e-08!347;UBERON:0004111!6.39e-08!241;UBERON:0001950!1.30e-07!20;UBERON:0000468!1.76e-07!659 | |ontology_enrichment_uberon=UBERON:0000955!1.02e-17!69;UBERON:0006238!1.02e-17!69;UBERON:0002616!1.68e-17!59;UBERON:0001017!1.07e-16!82;UBERON:0005743!1.55e-15!86;UBERON:0001049!2.69e-15!57;UBERON:0005068!2.69e-15!57;UBERON:0006241!2.69e-15!57;UBERON:0007135!2.69e-15!57;UBERON:0002346!6.35e-15!90;UBERON:0003075!1.23e-14!86;UBERON:0007284!1.23e-14!86;UBERON:0000073!6.10e-14!94;UBERON:0001016!6.10e-14!94;UBERON:0000475!1.85e-13!365;UBERON:0001893!3.01e-13!34;UBERON:0002780!3.52e-13!41;UBERON:0001890!3.52e-13!41;UBERON:0006240!3.52e-13!41;UBERON:0000025!4.45e-13!194;UBERON:0002020!9.13e-13!34;UBERON:0003528!9.13e-13!34;UBERON:0002791!1.34e-12!33;UBERON:0003080!1.42e-12!42;UBERON:0001869!2.11e-12!32;UBERON:0000477!6.95e-11!286;UBERON:0000033!1.48e-10!123;UBERON:0000119!2.97e-10!312;UBERON:0003056!6.11e-10!61;UBERON:0000483!1.49e-09!309;UBERON:0000924!1.71e-09!173;UBERON:0006601!1.71e-09!173;UBERON:0000153!1.74e-09!129;UBERON:0007811!1.74e-09!129;UBERON:0000956!3.23e-09!25;UBERON:0000203!3.23e-09!25;UBERON:0004121!3.72e-09!169;UBERON:0007023!6.21e-09!115;UBERON:0002619!1.64e-08!22;UBERON:0000481!3.00e-08!347;UBERON:0004111!6.39e-08!241;UBERON:0001950!1.30e-07!20;UBERON:0000468!1.76e-07!659 | ||
|ontology_enrichment_uberon_v019=UBERON:0006876;1.27e-10;11!UBERON:0005284;1.22e-08;5!UBERON:0002791;5.49e-08;32!UBERON:0001893;6.30e-08;34!UBERON:0002619;6.98e-08;22!UBERON:0001869;7.72e-08;32!UBERON:0001950;2.44e-07;20!UBERON:0002780;5.25e-07;41!UBERON:0001890;5.25e-07;41!UBERON:0004797;8.60e-07;4!UBERON:0000415;8.60e-07;4!UBERON:0007240;8.60e-07;4!UBERON:0005742;8.60e-07;4!UBERON:0005734;8.60e-07;4!UBERON:0004664;8.60e-07;4!UBERON:0004663;8.60e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0006876;1.27e-10;11!UBERON:0005284;1.22e-08;5!UBERON:0002791;5.49e-08;32!UBERON:0001893;6.30e-08;34!UBERON:0002619;6.98e-08;22!UBERON:0001869;7.72e-08;32!UBERON:0001950;2.44e-07;20!UBERON:0002780;5.25e-07;41!UBERON:0001890;5.25e-07;41!UBERON:0004797;8.60e-07;4!UBERON:0000415;8.60e-07;4!UBERON:0007240;8.60e-07;4!UBERON:0005742;8.60e-07;4!UBERON:0005734;8.60e-07;4!UBERON:0004664;8.60e-07;4!UBERON:0004663;8.60e-07;4 | ||
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| ||
|short_description=p9@EDIL3 | |short_description=p9@EDIL3 | ||
}} | }} |
Latest revision as of 01:25, 19 September 2015
Short description: | p9@EDIL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_EDIL3_5end |
Coexpression cluster: | C4526_Lens_Smooth_mesenchymal_Ewing_Chondrocyte_Fibroblast_Mesenchymal |
Association with transcript: | -159bp_to_ENST00000380138_5end |
EntrezGene: | EDIL3 |
HGNC: | 3173 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 8.56e-13 | 32 |
fibroblast | 3.17e-10 | 76 |
smooth muscle cell | 3.52e-08 | 43 |
smooth muscle myoblast | 3.52e-08 | 43 |
muscle precursor cell | 4.93e-07 | 58 |
myoblast | 4.93e-07 | 58 |
multi-potent skeletal muscle stem cell | 4.93e-07 | 58 |
fibroblast of tunica adventitia of artery | 5.83e-07 | 4 |
fibroblast of the aortic adventitia | 5.83e-07 | 4 |
muscle cell | 8.13e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.14e-07 | 14 |
musculoskeletal system disease | 2.28e-07 | 5 |
myotonic disease | 2.28e-07 | 5 |
muscle tissue disease | 2.28e-07 | 5 |
myopathy | 2.28e-07 | 5 |
muscular disease | 2.28e-07 | 5 |
myotonic dystrophy | 2.28e-07 | 5 |