FFCP PHASE1:Hg19::chr19:48758926..48758982,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100505812 | |EntrezGene=100505812 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000499475,NR_040599,uc002pik.2_5end | |association_with_transcript=0bp_to_ENST00000499475,NR_040599,uc002pik.2_5end | ||
|cluster_id=chr19:48758926..48758982,+ | |||
|coexpression_cluster_id=C1172 | |||
|description=CAGE_peak_1_at_LOC100505812_5end | |description=CAGE_peak_1_at_LOC100505812_5end | ||
|id=chr19:48758926..48758982,+ | |id=chr19:48758926..48758982,+ | ||
|ontology_enrichment_celltype=CL:0000037!1.50e-61!172;CL:0000566!1.50e-61!172;CL:0000988!7.03e-59!182;CL:0002032!1.05e-58!165;CL:0000837!1.05e-58!165;CL:0000738!3.70e-51!140;CL:0002031!1.15e-45!124;CL:0002087!3.16e-44!119;CL:0000763!1.63e-39!112;CL:0000049!1.63e-39!112;CL:0000766!2.21e-31!76;CL:0000557!6.41e-28!71;CL:0000839!1.49e-27!70;CL:0002009!1.55e-26!65;CL:0002194!1.08e-25!63;CL:0000576!1.08e-25!63;CL:0000040!1.08e-25!63;CL:0000559!1.08e-25!63;CL:0000860!2.24e-24!45;CL:0002057!9.32e-24!42;CL:0000542!3.05e-16!53;CL:0000051!3.05e-16!53;CL:0000838!3.25e-16!52;CL:0000134!5.29e-10!358;CL:0000115!6.84e-10!35;CL:0000945!2.45e-09!24;CL:0000826!2.45e-09!24;CL:0002139!6.48e-09!24;CL:0002320!1.45e-08!365;CL:0000236!6.23e-08!14;CL:0000791!1.15e-07!18;CL:0000789!1.15e-07!18;CL:0002420!1.15e-07!18;CL:0002419!1.15e-07!18;CL:0000790!1.15e-07!18;CL:0002078!2.56e-07!44;CL:0000084!3.12e-07!25;CL:0000827!3.12e-07!25;CL:0000071!5.15e-07!18;CL:0002546!5.15e-07!18 | |ontology_enrichment_celltype=CL:0000037!1.50e-61!172;CL:0000566!1.50e-61!172;CL:0000988!7.03e-59!182;CL:0002032!1.05e-58!165;CL:0000837!1.05e-58!165;CL:0000738!3.70e-51!140;CL:0002031!1.15e-45!124;CL:0002087!3.16e-44!119;CL:0000763!1.63e-39!112;CL:0000049!1.63e-39!112;CL:0000766!2.21e-31!76;CL:0000557!6.41e-28!71;CL:0000839!1.49e-27!70;CL:0002009!1.55e-26!65;CL:0002194!1.08e-25!63;CL:0000576!1.08e-25!63;CL:0000040!1.08e-25!63;CL:0000559!1.08e-25!63;CL:0000860!2.24e-24!45;CL:0002057!9.32e-24!42;CL:0000542!3.05e-16!53;CL:0000051!3.05e-16!53;CL:0000838!3.25e-16!52;CL:0000134!5.29e-10!358;CL:0000115!6.84e-10!35;CL:0000945!2.45e-09!24;CL:0000826!2.45e-09!24;CL:0002139!6.48e-09!24;CL:0002320!1.45e-08!365;CL:0000236!6.23e-08!14;CL:0000791!1.15e-07!18;CL:0000789!1.15e-07!18;CL:0002420!1.15e-07!18;CL:0002419!1.15e-07!18;CL:0000790!1.15e-07!18;CL:0002078!2.56e-07!44;CL:0000084!3.12e-07!25;CL:0000827!3.12e-07!25;CL:0000071!5.15e-07!18;CL:0002546!5.15e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.48e-19;33!CL:0002057;3.48e-19;33!CL:0000576;1.09e-17;48!CL:0000473;1.77e-17;39!CL:0000234;1.77e-17;39!CL:0000766;2.04e-15;69!CL:0002087;2.55e-14;104!CL:0000763;1.22e-13;100!CL:0000738;1.84e-12;136!CL:0000988;7.37e-12;177!CL:0000542;3.99e-11;53!CL:0000945;4.84e-10;24!CL:0002139;1.00e-09;24!CL:0000115;1.01e-09;36!CL:0000236;8.76e-09;13!CL:0000791;2.81e-08;18!CL:0000789;2.81e-08;18!CL:0002419;2.81e-08;18!CL:0000084;6.84e-08;25!CL:0000071;1.51e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,8.90e-68,168;CL:0002032,1.26e-64,161;CL:0000837,1.26e-64,161;CL:0000988,4.34e-64,177;CL:0000738,1.27e-56,136;CL:0002031,4.42e-51,120;CL:0002087,1.71e-49,115;CL:0000763,2.40e-43,108;CL:0000049,2.40e-43,108;CL:0000766,2.43e-35,72;CL:0000557,1.96e-31,67;CL:0000839,4.99e-31,66;CL:0002009,6.08e-30,61;CL:0002194,5.25e-29,59;CL:0000576,5.25e-29,59;CL:0000040,5.25e-29,59;CL:0000559,5.25e-29,59;CL:0000473,7.05e-28,48;CL:0000234,7.05e-28,48;CL:0000860,2.55e-26,42;CL:0002057,2.55e-26,42;CL:0000542,5.86e-18,53;CL:0000051,5.86e-18,53;CL:0000838,6.28e-18,52;CL:0000134,2.28e-12,354;CL:0000115,4.22e-11,36;CL:0002320,6.06e-11,361;CL:0000945,3.12e-10,24;CL:0000826,3.12e-10,24;CL:0002139,9.22e-10,24;CL:0000236,1.15e-08,14;CL:0000791,2.26e-08,18;CL:0000789,2.26e-08,18;CL:0002420,2.26e-08,18;CL:0002419,2.26e-08,18;CL:0000790,2.26e-08,18;CL:0002078,5.83e-08,45;CL:0000084,6.52e-08,25;CL:0000827,6.52e-08,25;CL:0000071,1.21e-07,18;CL:0002546,1.21e-07,18;CL:0000219,7.05e-07,386;CL:0002393,9.52e-07,9;CL:0002397,9.52e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;3.47e-19;42!CL:0000049;3.42e-12;108!CL:0000051;3.99e-11;53!CL:0000790;2.81e-08;18!CL:0002546;1.51e-07;18 | |||
|ontology_enrichment_disease=DOID:2531!9.89e-09!51;DOID:0060083!9.89e-09!51;DOID:1240!4.99e-08!39;DOID:8692!5.91e-08!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;3.12e-08;31!DOID:1240;5.14e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.29e-09,51;DOID:0060083,1.29e-09,51;DOID:1240,1.38e-08,39;DOID:8692,1.84e-08,31 | |||
|ontology_enrichment_uberon=UBERON:0002193!6.08e-38!112;UBERON:0002390!2.44e-34!102;UBERON:0003061!2.44e-34!102;UBERON:0002405!3.41e-25!115;UBERON:0002371!1.95e-24!80;UBERON:0003081!9.23e-22!216;UBERON:0001474!8.90e-21!86;UBERON:0004765!3.43e-15!101;UBERON:0001434!3.43e-15!101;UBERON:0000178!4.50e-08!15;UBERON:0000179!4.50e-08!15;UBERON:0000463!4.50e-08!15;UBERON:0002384!1.12e-07!375;UBERON:0001986!5.15e-07!18;UBERON:0004638!5.15e-07!18;UBERON:0004852!5.15e-07!18;UBERON:0007023!9.46e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.91e-09;15!UBERON:0000179;6.91e-09;15!UBERON:0000463;6.91e-09;15!UBERON:0002193;3.66e-08;42!UBERON:0004638;1.51e-07;18!UBERON:0001986;1.51e-07;18!UBERON:0004852;1.51e-07;18!UBERON:0002390;3.36e-07;32 | |||
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| ||
|short_description=p1@LOC100505812 | |short_description=p1@LOC100505812 | ||
}} | }} |
Latest revision as of 01:40, 19 September 2015
Short description: | p1@LOC100505812 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC100505812_5end |
Coexpression cluster: | C1172_Neutrophils_Whole_CD14_CD14CD16_Eosinophils_CD19_Dendritic |
Association with transcript: | 0bp_to_ENST00000499475, NR_040599, uc002pik.2_5end |
EntrezGene: | LOC100505812 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.79e-43 | 108 |
hematopoietic system | 2.87e-39 | 98 |
blood island | 2.87e-39 | 98 |
immune system | 4.99e-35 | 93 |
bone marrow | 3.98e-28 | 76 |
lateral plate mesoderm | 3.63e-24 | 203 |
bone element | 5.53e-24 | 82 |
skeletal element | 2.62e-20 | 90 |
skeletal system | 2.49e-16 | 100 |
connective tissue | 9.06e-10 | 371 |
blood | 7.98e-09 | 15 |
haemolymphatic fluid | 7.98e-09 | 15 |
organism substance | 7.98e-09 | 15 |
blood vessel endothelium | 1.21e-07 | 18 |
endothelium | 1.21e-07 | 18 |
cardiovascular system endothelium | 1.21e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.29e-09 | 51 |
immune system cancer | 1.29e-09 | 51 |
leukemia | 1.38e-08 | 39 |
myeloid leukemia | 1.84e-08 | 31 |