FFCP PHASE1:Hg19::chr11:64107663..64107703,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:64107663..64107703,+
|short_description=p1@CCDC88B
|description=CAGE_peak_1_at_CCDC88B_5end
|association_with_transcript=0bp_to_ENST00000356786,ENST000003...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=283234 | |EntrezGene=283234 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26757 | |HGNC=26757 | ||
|UniProt=A6NC98, | |TSSclassifier=strong | ||
|UniProt=A6NC98,B2RTU8 | |||
|association_with_transcript=0bp_to_ENST00000356786,ENST00000377638,ENST00000463837,NM_032251,uc001nzy.2,uc009ypo.1_5end | |||
|cluster_id=chr11:64107663..64107703,+ | |||
|coexpression_cluster_id=C57 | |||
|description=CAGE_peak_1_at_CCDC88B_5end | |||
|id=chr11:64107663..64107703,+ | |||
|ontology_enrichment_celltype=CL:0000037!2.70e-82!172;CL:0000566!2.70e-82!172;CL:0002032!3.59e-78!165;CL:0000837!3.59e-78!165;CL:0000988!8.41e-78!182;CL:0000738!6.41e-74!140;CL:0002031!9.15e-61!124;CL:0002087!1.00e-58!119;CL:0000763!8.12e-47!112;CL:0000049!8.12e-47!112;CL:0000766!2.35e-37!76;CL:0000557!8.74e-33!71;CL:0000839!5.10e-31!70;CL:0002009!3.86e-29!65;CL:0002194!6.09e-28!63;CL:0000576!6.09e-28!63;CL:0000040!6.09e-28!63;CL:0000559!6.09e-28!63;CL:0002057!3.89e-27!42;CL:0000542!1.53e-26!53;CL:0000051!1.53e-26!53;CL:0000838!2.89e-26!52;CL:0000860!1.18e-24!45;CL:0000084!5.93e-14!25;CL:0000827!5.93e-14!25;CL:0000791!5.04e-12!18;CL:0000789!5.04e-12!18;CL:0002420!5.04e-12!18;CL:0002419!5.04e-12!18;CL:0000790!5.04e-12!18;CL:0000134!1.36e-11!358;CL:0000945!2.64e-11!24;CL:0000826!2.64e-11!24;CL:0002320!1.17e-10!365;CL:0000625!1.97e-08!11;CL:0000094!4.32e-08!8;CL:0002393!5.42e-08!9;CL:0002397!5.42e-08!9;CL:0000236!3.30e-07!14;CL:0000219!6.93e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.69e-20;33!CL:0002057;4.69e-20;33!CL:0000576;5.92e-20;48!CL:0000473;2.12e-18;39!CL:0000234;2.12e-18;39!CL:0000766;2.59e-18;69!CL:0002087;3.18e-18;104!CL:0000738;5.66e-17;136!CL:0000542;8.90e-16;53!CL:0000763;1.98e-15;100!CL:0000988;1.53e-14;177!CL:0000084;4.45e-14;25!CL:0000791;8.06e-13;18!CL:0000789;8.06e-13;18!CL:0002419;8.06e-13;18!CL:0000945;4.86e-12;24!CL:0000625;5.94e-09;11!CL:0000094;1.37e-08;8!CL:0000236;2.81e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.69e-91,168;CL:0000988,1.34e-87,177;CL:0002032,7.50e-87,161;CL:0000837,7.50e-87,161;CL:0000738,3.40e-82,136;CL:0002031,6.69e-68,120;CL:0002087,9.84e-66,115;CL:0000763,9.40e-54,108;CL:0000049,9.40e-54,108;CL:0000766,1.05e-43,72;CL:0000557,1.28e-38,67;CL:0000839,1.32e-36,66;CL:0002009,1.26e-34,61;CL:0002194,2.61e-33,59;CL:0000576,2.61e-33,59;CL:0000040,2.61e-33,59;CL:0000559,2.61e-33,59;CL:0000473,1.36e-30,48;CL:0000234,1.36e-30,48;CL:0000860,4.42e-29,42;CL:0002057,4.42e-29,42;CL:0000542,1.27e-27,53;CL:0000051,1.27e-27,53;CL:0000838,2.54e-27,52;CL:0000134,2.60e-14,354;CL:0000084,4.54e-14,25;CL:0000827,4.54e-14,25;CL:0002320,4.25e-13,361;CL:0000791,8.13e-13,18;CL:0000789,8.13e-13,18;CL:0002420,8.13e-13,18;CL:0002419,8.13e-13,18;CL:0000790,8.13e-13,18;CL:0000945,4.83e-12,24;CL:0000826,4.83e-12,24;CL:0000219,2.60e-09,386;CL:0000625,5.92e-09,11;CL:0000094,1.38e-08,8;CL:0002393,1.76e-08,9;CL:0002397,1.76e-08,9;CL:0000236,1.22e-07,14 | |||
|ontology_enrichment_development_v019=CL:0002057;6.06e-21;42!CL:0000051;8.90e-16;53!CL:0000049;1.10e-14;108!CL:0000790;8.06e-13;18 | |||
|ontology_enrichment_disease=DOID:2531!2.55e-12!51;DOID:0060083!2.55e-12!51;DOID:1240!3.35e-10!39;DOID:8692!7.95e-08!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;2.03e-08;39!DOID:8692;3.70e-08;31!DOID:2531;6.24e-08;51!DOID:0060083;6.24e-08;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,6.49e-13,51;DOID:0060083,6.49e-13,51;DOID:1240,4.24e-11,39;DOID:8692,1.55e-08,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.25e-41!102;UBERON:0003061!1.25e-41!102;UBERON:0002193!2.00e-36!112;UBERON:0002371!6.56e-28!80;UBERON:0007023!1.51e-24!115;UBERON:0001474!7.69e-24!86;UBERON:0002405!5.52e-20!115;UBERON:0004765!1.11e-17!101;UBERON:0001434!1.11e-17!101;UBERON:0000178!7.27e-12!15;UBERON:0000179!7.27e-12!15;UBERON:0000463!7.27e-12!15;UBERON:0002384!1.98e-09!375;UBERON:0003081!1.07e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.22e-12;15!UBERON:0000179;1.22e-12;15!UBERON:0000463;1.22e-12;15!UBERON:0002390;2.79e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.93e-48,98;UBERON:0003061,2.93e-48,98;UBERON:0002193,1.33e-42,108;UBERON:0002371,4.02e-33,76;UBERON:0002405,2.00e-31,93;UBERON:0001474,1.40e-28,82;UBERON:0004765,1.45e-23,90;UBERON:0007023,6.41e-21,114;UBERON:0001434,3.17e-19,100;UBERON:0000178,1.21e-12,15;UBERON:0000179,1.21e-12,15;UBERON:0000463,1.21e-12,15;UBERON:0002384,7.74e-12,371;UBERON:0003081,4.15e-11,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.6616528807584,27.9963010024315,26.6829548653373,84.1799552456655,70.6246092498871,59.139759106741,0,0,0,7.51431845628926,19.903692548239,5.87200878669694,120.217003651417,107.291279396526,110.8925549358,11.1957737119962,14.2513213048351,13.3939295169777,46.2366399319016,34.3867108756817,34.6895207498577,39.2805072370607,24.6700732813095,26.6347478969789,30.4953935861479,35.8624989140741,21.7563651497498,49.9881237068097,44.538443167284,43.3364757101894,38.9661642853192,28.1093334559581,19.1014961778322,40.0969899005882,35.9440510325225,36.4422161705454,42.5508177240864,33.5098944804342,35.3766542942136,38.5978287376017,38.5821952789975,40.4834461847124,37.4360511232547,34.9393555341535,30.4064382587163,39.350967671169,40.8788175946197,31.6462387440884,43.51858898026,51.0250319916104,39.8351426465914,58.298559565031,79.2933994203153,69.1120022797445,45.0320135111173,42.5681689206053,44.7527176723353,15.839662001519,28.945346396893,21.3482220927253,36.6987991407196,30.0296990277009,32.1861366374511,24.4586602930399,31.483773899667,29.5990743936913,22.3150131960957,29.0527653375174,7.93027971474155,26.9044110231137,7.11137028892708,41.3090517239049,57.379571361378,51.6059762488768,36.7810289859492,14.0146574652444,21.305151258063,17.534405556712,37.0996821427628,21.800837153138,23.7041267204475,37.1001293358071,44.4476879448093,43.5698814325592,56.5666391836646,53.6119034504546,53.3237677752497,34.8473423430842,34.512766823573,36.5874333317419,38.7517952025676,24.142891096921,38.8299013395372,32.3865205784964,33.1308030897061,24.7411712465439,30.414465422348,49.2380639384317,48.3789390163702,49.9722906209383,45.9347868965393,32.0239918799208,58.8691690216219,61.2438048344232,55.3229222832292,0,0,0,0,0,0,0,0,0,0,0.263504357079378,3.6019245761871,0,0,34.0774763337417,40.9204882653278,32.574700327122,4.29283123749616,4.0039643754609,2.97166001063652,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,119.920179866818,155.11210565933,0,0,0,0,0,2.4826786753885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,1.96565443335525,1.18157981336281,19.8658394736593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.37137820697151,11.7002132569619,9.51239438647861,0,0,0,0,0,0,3.4486426652716,32.5779205848936,44.575544841266,54.6214623450284,62.8687318463372,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.08118903205952,5.02257091432126,8.43335757932127,0,0,0,0,0,0,27.5729454224077,58.9121973003762,62.7476242841195,65.8399776115109,0,0,0,0.167516265334349,0,108.606018472341,149.580729602012,105.675955926189,0,0,0.271265023699736,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,50.8649344262303,75.0685418848787,59.2337945809116,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0.223874754722178,2.85037839639715,2.61435451024901,0,0,0,5.77029665227245,0,0,0,0,0,0,0,0,0,0,0,0.852266274161009,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0.844430541190656,0,0,0,0.0962221127255121,0.670302275535787,0,5.08376524194607,0,0,0,0,71.0426652925037,87.9332788213732,87.1560196376469,91.9574653267066,97.9042209945142,103.107256479642,80.4646841484791,75.3468917479557,0,0.962479855263359,0,7.9895365304059,1.44269212976445,9.10615594859701,4.78278818186467,4.7899049143876,13.0223651690009,28.999280833172,12.9848776109822,23.0253686053036,26.4752227678503,11.9076720787498,205.520271213855,3.55512733383367,11.0805771821553,18.1619736471943,77.9298614973297,27.1369222357054,24.5792611446766,33.7750922917548,28.6980523744483,15.4356595367612,0,14.7704878737255,1.35227839237992,13.6559506879106,4.22961015263549,0,5.27429445378818,0,24.4061011567678,0,0,1.78178808499583,0,1.9882952955326,7.59614848616769,0,0.659215496907038,0,3.98495976502139,36.4694768501115,0,0,27.5709964232796,0,0,0,45.0183685799647,3.15658898038188,43.1069566224492,0,4.84666373047609,1.29875337426592,0,0,0,3.62499787717397,0.1137934482855,0,0,0,0,0,3.54296554325536,4.5826646677655,0,0.774054819518572,1.18219047581419,2.63262476584767,0,0,4.07836370070124,0,0,0,0,0.638002319463839,0.183195186803725,1.5991043280559,15.3289947293605,5.49430897382587,57.0106068917536,0,0,0,0,7.78789237003856,0,0,0,0,5.97157158647103,8.49192619232056,6.11030144933625,14.8260564340311,23.847840216675,23.0772508407056,6.53790989912567,2.40773294189637,3.04543779442941,10.0350134068616,0,0,9.47002566838537,6.04953580243319,0.30607276163049,6.57140428136275,0,0,0,0,0,0,0.284609546029793,0,0,0,0,1.7472666824203,0,0.0967563312890851,0,0,3.87956065953678,0,2.03382666702479,0,0,1.70939149080872,0,0.0801588202515337,11.3130087211857,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,8.35122811241158,60.040896391477,0,21.5567630509038,4.18923601908381,1.3749625440701,2.15361907373044,1.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| ||
|short_description=p1@CCDC88B | |||
}} | }} |
Latest revision as of 03:06, 19 September 2015
Short description: | p1@CCDC88B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CCDC88B_5end |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | 0bp_to_ENST00000356786, ENST00000377638, ENST00000463837, NM_032251, uc001nzy.2, uc009ypo.1_5end |
EntrezGene: | CCDC88B |
HGNC: | 26757 |
UniProt: | A6NC98B2RTU8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.93e-48 | 98 |
blood island | 2.93e-48 | 98 |
hemolymphoid system | 1.33e-42 | 108 |
bone marrow | 4.02e-33 | 76 |
immune system | 2.00e-31 | 93 |
bone element | 1.40e-28 | 82 |
skeletal element | 1.45e-23 | 90 |
adult organism | 6.41e-21 | 114 |
skeletal system | 3.17e-19 | 100 |
blood | 1.21e-12 | 15 |
haemolymphatic fluid | 1.21e-12 | 15 |
organism substance | 1.21e-12 | 15 |
connective tissue | 7.74e-12 | 371 |
lateral plate mesoderm | 4.15e-11 | 203 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 6.49e-13 | 51 |
immune system cancer | 6.49e-13 | 51 |
leukemia | 4.24e-11 | 39 |
myeloid leukemia | 1.55e-08 | 31 |