FFCP PHASE1:Hg19::chr11:64107663..64107703,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=283234 | |EntrezGene=283234 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26757 | |HGNC=26757 | ||
|TSSclassifier=strong | |||
|UniProt=A6NC98,B2RTU8 | |UniProt=A6NC98,B2RTU8 | ||
|association_with_transcript=0bp_to_ENST00000356786,ENST00000377638,ENST00000463837,NM_032251,uc001nzy.2,uc009ypo.1_5end | |association_with_transcript=0bp_to_ENST00000356786,ENST00000377638,ENST00000463837,NM_032251,uc001nzy.2,uc009ypo.1_5end | ||
|cluster_id=chr11:64107663..64107703,+ | |||
|coexpression_cluster_id=C57 | |coexpression_cluster_id=C57 | ||
|description=CAGE_peak_1_at_CCDC88B_5end | |description=CAGE_peak_1_at_CCDC88B_5end | ||
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|ontology_enrichment_celltype=CL:0000037!2.70e-82!172;CL:0000566!2.70e-82!172;CL:0002032!3.59e-78!165;CL:0000837!3.59e-78!165;CL:0000988!8.41e-78!182;CL:0000738!6.41e-74!140;CL:0002031!9.15e-61!124;CL:0002087!1.00e-58!119;CL:0000763!8.12e-47!112;CL:0000049!8.12e-47!112;CL:0000766!2.35e-37!76;CL:0000557!8.74e-33!71;CL:0000839!5.10e-31!70;CL:0002009!3.86e-29!65;CL:0002194!6.09e-28!63;CL:0000576!6.09e-28!63;CL:0000040!6.09e-28!63;CL:0000559!6.09e-28!63;CL:0002057!3.89e-27!42;CL:0000542!1.53e-26!53;CL:0000051!1.53e-26!53;CL:0000838!2.89e-26!52;CL:0000860!1.18e-24!45;CL:0000084!5.93e-14!25;CL:0000827!5.93e-14!25;CL:0000791!5.04e-12!18;CL:0000789!5.04e-12!18;CL:0002420!5.04e-12!18;CL:0002419!5.04e-12!18;CL:0000790!5.04e-12!18;CL:0000134!1.36e-11!358;CL:0000945!2.64e-11!24;CL:0000826!2.64e-11!24;CL:0002320!1.17e-10!365;CL:0000625!1.97e-08!11;CL:0000094!4.32e-08!8;CL:0002393!5.42e-08!9;CL:0002397!5.42e-08!9;CL:0000236!3.30e-07!14;CL:0000219!6.93e-07!390 | |ontology_enrichment_celltype=CL:0000037!2.70e-82!172;CL:0000566!2.70e-82!172;CL:0002032!3.59e-78!165;CL:0000837!3.59e-78!165;CL:0000988!8.41e-78!182;CL:0000738!6.41e-74!140;CL:0002031!9.15e-61!124;CL:0002087!1.00e-58!119;CL:0000763!8.12e-47!112;CL:0000049!8.12e-47!112;CL:0000766!2.35e-37!76;CL:0000557!8.74e-33!71;CL:0000839!5.10e-31!70;CL:0002009!3.86e-29!65;CL:0002194!6.09e-28!63;CL:0000576!6.09e-28!63;CL:0000040!6.09e-28!63;CL:0000559!6.09e-28!63;CL:0002057!3.89e-27!42;CL:0000542!1.53e-26!53;CL:0000051!1.53e-26!53;CL:0000838!2.89e-26!52;CL:0000860!1.18e-24!45;CL:0000084!5.93e-14!25;CL:0000827!5.93e-14!25;CL:0000791!5.04e-12!18;CL:0000789!5.04e-12!18;CL:0002420!5.04e-12!18;CL:0002419!5.04e-12!18;CL:0000790!5.04e-12!18;CL:0000134!1.36e-11!358;CL:0000945!2.64e-11!24;CL:0000826!2.64e-11!24;CL:0002320!1.17e-10!365;CL:0000625!1.97e-08!11;CL:0000094!4.32e-08!8;CL:0002393!5.42e-08!9;CL:0002397!5.42e-08!9;CL:0000236!3.30e-07!14;CL:0000219!6.93e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.69e-20;33!CL:0002057;4.69e-20;33!CL:0000576;5.92e-20;48!CL:0000473;2.12e-18;39!CL:0000234;2.12e-18;39!CL:0000766;2.59e-18;69!CL:0002087;3.18e-18;104!CL:0000738;5.66e-17;136!CL:0000542;8.90e-16;53!CL:0000763;1.98e-15;100!CL:0000988;1.53e-14;177!CL:0000084;4.45e-14;25!CL:0000791;8.06e-13;18!CL:0000789;8.06e-13;18!CL:0002419;8.06e-13;18!CL:0000945;4.86e-12;24!CL:0000625;5.94e-09;11!CL:0000094;1.37e-08;8!CL:0000236;2.81e-07;13 | |ontology_enrichment_celltype_v019=CL:0000860;4.69e-20;33!CL:0002057;4.69e-20;33!CL:0000576;5.92e-20;48!CL:0000473;2.12e-18;39!CL:0000234;2.12e-18;39!CL:0000766;2.59e-18;69!CL:0002087;3.18e-18;104!CL:0000738;5.66e-17;136!CL:0000542;8.90e-16;53!CL:0000763;1.98e-15;100!CL:0000988;1.53e-14;177!CL:0000084;4.45e-14;25!CL:0000791;8.06e-13;18!CL:0000789;8.06e-13;18!CL:0002419;8.06e-13;18!CL:0000945;4.86e-12;24!CL:0000625;5.94e-09;11!CL:0000094;1.37e-08;8!CL:0000236;2.81e-07;13 | ||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.69e-91,168;CL:0000988,1.34e-87,177;CL:0002032,7.50e-87,161;CL:0000837,7.50e-87,161;CL:0000738,3.40e-82,136;CL:0002031,6.69e-68,120;CL:0002087,9.84e-66,115;CL:0000763,9.40e-54,108;CL:0000049,9.40e-54,108;CL:0000766,1.05e-43,72;CL:0000557,1.28e-38,67;CL:0000839,1.32e-36,66;CL:0002009,1.26e-34,61;CL:0002194,2.61e-33,59;CL:0000576,2.61e-33,59;CL:0000040,2.61e-33,59;CL:0000559,2.61e-33,59;CL:0000473,1.36e-30,48;CL:0000234,1.36e-30,48;CL:0000860,4.42e-29,42;CL:0002057,4.42e-29,42;CL:0000542,1.27e-27,53;CL:0000051,1.27e-27,53;CL:0000838,2.54e-27,52;CL:0000134,2.60e-14,354;CL:0000084,4.54e-14,25;CL:0000827,4.54e-14,25;CL:0002320,4.25e-13,361;CL:0000791,8.13e-13,18;CL:0000789,8.13e-13,18;CL:0002420,8.13e-13,18;CL:0002419,8.13e-13,18;CL:0000790,8.13e-13,18;CL:0000945,4.83e-12,24;CL:0000826,4.83e-12,24;CL:0000219,2.60e-09,386;CL:0000625,5.92e-09,11;CL:0000094,1.38e-08,8;CL:0002393,1.76e-08,9;CL:0002397,1.76e-08,9;CL:0000236,1.22e-07,14 | |||
|ontology_enrichment_development_v019=CL:0002057;6.06e-21;42!CL:0000051;8.90e-16;53!CL:0000049;1.10e-14;108!CL:0000790;8.06e-13;18 | |ontology_enrichment_development_v019=CL:0002057;6.06e-21;42!CL:0000051;8.90e-16;53!CL:0000049;1.10e-14;108!CL:0000790;8.06e-13;18 | ||
|ontology_enrichment_disease=DOID:2531!2.55e-12!51;DOID:0060083!2.55e-12!51;DOID:1240!3.35e-10!39;DOID:8692!7.95e-08!31 | |ontology_enrichment_disease=DOID:2531!2.55e-12!51;DOID:0060083!2.55e-12!51;DOID:1240!3.35e-10!39;DOID:8692!7.95e-08!31 | ||
|ontology_enrichment_disease_v019=DOID:1240;2.03e-08;39!DOID:8692;3.70e-08;31!DOID:2531;6.24e-08;51!DOID:0060083;6.24e-08;51 | |ontology_enrichment_disease_v019=DOID:1240;2.03e-08;39!DOID:8692;3.70e-08;31!DOID:2531;6.24e-08;51!DOID:0060083;6.24e-08;51 | ||
|ontology_enrichment_disease_v019_2=DOID:2531,6.49e-13,51;DOID:0060083,6.49e-13,51;DOID:1240,4.24e-11,39;DOID:8692,1.55e-08,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.25e-41!102;UBERON:0003061!1.25e-41!102;UBERON:0002193!2.00e-36!112;UBERON:0002371!6.56e-28!80;UBERON:0007023!1.51e-24!115;UBERON:0001474!7.69e-24!86;UBERON:0002405!5.52e-20!115;UBERON:0004765!1.11e-17!101;UBERON:0001434!1.11e-17!101;UBERON:0000178!7.27e-12!15;UBERON:0000179!7.27e-12!15;UBERON:0000463!7.27e-12!15;UBERON:0002384!1.98e-09!375;UBERON:0003081!1.07e-07!216 | |ontology_enrichment_uberon=UBERON:0002390!1.25e-41!102;UBERON:0003061!1.25e-41!102;UBERON:0002193!2.00e-36!112;UBERON:0002371!6.56e-28!80;UBERON:0007023!1.51e-24!115;UBERON:0001474!7.69e-24!86;UBERON:0002405!5.52e-20!115;UBERON:0004765!1.11e-17!101;UBERON:0001434!1.11e-17!101;UBERON:0000178!7.27e-12!15;UBERON:0000179!7.27e-12!15;UBERON:0000463!7.27e-12!15;UBERON:0002384!1.98e-09!375;UBERON:0003081!1.07e-07!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.22e-12;15!UBERON:0000179;1.22e-12;15!UBERON:0000463;1.22e-12;15!UBERON:0002390;2.79e-08;32 | |ontology_enrichment_uberon_v019=UBERON:0000178;1.22e-12;15!UBERON:0000179;1.22e-12;15!UBERON:0000463;1.22e-12;15!UBERON:0002390;2.79e-08;32 | ||
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| ||
|short_description=p1@CCDC88B | |short_description=p1@CCDC88B | ||
}} | }} |
Latest revision as of 03:06, 19 September 2015
Short description: | p1@CCDC88B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CCDC88B_5end |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | 0bp_to_ENST00000356786, ENST00000377638, ENST00000463837, NM_032251, uc001nzy.2, uc009ypo.1_5end |
EntrezGene: | CCDC88B |
HGNC: | 26757 |
UniProt: | A6NC98B2RTU8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.93e-48 | 98 |
blood island | 2.93e-48 | 98 |
hemolymphoid system | 1.33e-42 | 108 |
bone marrow | 4.02e-33 | 76 |
immune system | 2.00e-31 | 93 |
bone element | 1.40e-28 | 82 |
skeletal element | 1.45e-23 | 90 |
adult organism | 6.41e-21 | 114 |
skeletal system | 3.17e-19 | 100 |
blood | 1.21e-12 | 15 |
haemolymphatic fluid | 1.21e-12 | 15 |
organism substance | 1.21e-12 | 15 |
connective tissue | 7.74e-12 | 371 |
lateral plate mesoderm | 4.15e-11 | 203 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 6.49e-13 | 51 |
immune system cancer | 6.49e-13 | 51 |
leukemia | 4.24e-11 | 39 |
myeloid leukemia | 1.55e-08 | 31 |