FFCP PHASE1:Hg19::chr4:87515493..87515510,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5783 | |EntrezGene=5783 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9646 | |HGNC=9646 | ||
|TSSclassifier=strong | |||
|UniProt=D6R9M4 | |UniProt=D6R9M4 | ||
|association_with_transcript=23bp_to_ENST00000502971_5end | |association_with_transcript=23bp_to_ENST00000502971_5end | ||
|cluster_id=chr4:87515493..87515510,+ | |||
|coexpression_cluster_id=C2797 | |||
|description=CAGE_peak_2_at_PTPN13_5end | |description=CAGE_peak_2_at_PTPN13_5end | ||
|id=chr4:87515493..87515510,+ | |id=chr4:87515493..87515510,+ | ||
|ontology_enrichment_celltype=CL:0002620!3.34e-09!23;CL:0000057!7.96e-07!75 | |ontology_enrichment_celltype=CL:0002620!3.34e-09!23;CL:0000057!7.96e-07!75 | ||
|ontology_enrichment_celltype_v019=CL:0002620;2.11e-09;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,1.94e-09,23;CL:0000057,8.91e-07,76 | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.69e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000924!2.81e-20!173;UBERON:0006601!2.81e-20!173;UBERON:0004121!2.51e-18!169;UBERON:0000475!6.78e-18!365;UBERON:0000033!9.09e-18!123;UBERON:0000153!3.45e-17!129;UBERON:0007811!3.45e-17!129;UBERON:0003102!8.15e-17!95;UBERON:0000073!4.98e-13!94;UBERON:0001016!4.98e-13!94;UBERON:0001017!1.07e-11!82;UBERON:0005743!1.25e-11!86;UBERON:0002346!4.66e-10!90;UBERON:0000955!5.25e-10!69;UBERON:0006238!5.25e-10!69;UBERON:0001049!1.05e-09!57;UBERON:0005068!1.05e-09!57;UBERON:0006241!1.05e-09!57;UBERON:0007135!1.05e-09!57;UBERON:0000468!1.24e-09!659;UBERON:0002097!1.66e-09!40;UBERON:0003080!3.05e-09!42;UBERON:0002780!3.28e-09!41;UBERON:0001890!3.28e-09!41;UBERON:0006240!3.28e-09!41;UBERON:0003056!3.79e-09!61;UBERON:0002616!7.26e-09!59;UBERON:0000062!2.09e-08!511;UBERON:0003075!2.18e-08!86;UBERON:0007284!2.18e-08!86;UBERON:0002199!2.22e-08!45;UBERON:0002416!2.22e-08!45;UBERON:0000161!3.00e-08!35;UBERON:0000165!4.95e-08!28;UBERON:0000930!4.95e-08!28;UBERON:0001444!5.21e-08!48;UBERON:0000481!1.08e-07!347;UBERON:0007023!2.99e-07!115 | |ontology_enrichment_uberon=UBERON:0000924!2.81e-20!173;UBERON:0006601!2.81e-20!173;UBERON:0004121!2.51e-18!169;UBERON:0000475!6.78e-18!365;UBERON:0000033!9.09e-18!123;UBERON:0000153!3.45e-17!129;UBERON:0007811!3.45e-17!129;UBERON:0003102!8.15e-17!95;UBERON:0000073!4.98e-13!94;UBERON:0001016!4.98e-13!94;UBERON:0001017!1.07e-11!82;UBERON:0005743!1.25e-11!86;UBERON:0002346!4.66e-10!90;UBERON:0000955!5.25e-10!69;UBERON:0006238!5.25e-10!69;UBERON:0001049!1.05e-09!57;UBERON:0005068!1.05e-09!57;UBERON:0006241!1.05e-09!57;UBERON:0007135!1.05e-09!57;UBERON:0000468!1.24e-09!659;UBERON:0002097!1.66e-09!40;UBERON:0003080!3.05e-09!42;UBERON:0002780!3.28e-09!41;UBERON:0001890!3.28e-09!41;UBERON:0006240!3.28e-09!41;UBERON:0003056!3.79e-09!61;UBERON:0002616!7.26e-09!59;UBERON:0000062!2.09e-08!511;UBERON:0003075!2.18e-08!86;UBERON:0007284!2.18e-08!86;UBERON:0002199!2.22e-08!45;UBERON:0002416!2.22e-08!45;UBERON:0000161!3.00e-08!35;UBERON:0000165!4.95e-08!28;UBERON:0000930!4.95e-08!28;UBERON:0001444!5.21e-08!48;UBERON:0000481!1.08e-07!347;UBERON:0007023!2.99e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0000165;8.60e-08;28!UBERON:0002780;4.24e-07;41!UBERON:0001890;4.24e-07;41!UBERON:0002097;6.30e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.27e-21,171;UBERON:0000924,1.27e-21,171;UBERON:0006601,1.27e-21,171;UBERON:0003102,1.37e-17,99;UBERON:0001016,1.53e-13,89;UBERON:0010371,1.53e-12,104;UBERON:0001017,4.26e-12,81;UBERON:0002346,9.95e-12,86;UBERON:0010314,3.58e-11,132;UBERON:0000955,2.35e-10,68;UBERON:0006238,2.35e-10,68;UBERON:0011216,3.20e-10,223;UBERON:0001049,4.29e-10,56;UBERON:0005068,4.29e-10,56;UBERON:0006241,4.29e-10,56;UBERON:0007135,4.29e-10,56;UBERON:0003075,7.15e-10,82;UBERON:0007284,7.15e-10,82;UBERON:0000073,1.14e-09,53;UBERON:0002616,1.14e-09,53;UBERON:0002780,1.49e-09,41;UBERON:0001890,1.49e-09,41;UBERON:0003080,1.49e-09,41;UBERON:0006240,1.49e-09,41;UBERON:0002097,1.87e-09,41;UBERON:0003056,1.90e-09,61;UBERON:0000033,1.12e-08,56;UBERON:0002199,1.91e-08,46;UBERON:0002416,1.91e-08,46;UBERON:0000161,1.98e-08,36;UBERON:0000165,2.16e-08,29;UBERON:0000930,2.16e-08,29;UBERON:0000153,3.75e-08,62;UBERON:0007811,3.75e-08,62;UBERON:0001444,5.05e-08,49;UBERON:0007023,5.04e-07,114 | |||
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| ||
|short_description=p2@PTPN13 | |short_description=p2@PTPN13 | ||
}} | }} |
Latest revision as of 04:14, 19 September 2015
Short description: | p2@PTPN13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PTPN13_5end |
Coexpression cluster: | C2797_medulloblastoma_neuroectodermal_peripheral_pineal_carcinoid_neuroepithelioma_small |
Association with transcript: | 23bp_to_ENST00000502971_5end |
EntrezGene: | PTPN13 |
HGNC: | 9646 |
UniProt: | D6R9M4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 1.94e-09 | 23 |
fibroblast | 8.91e-07 | 76 |