FFCP PHASE1:Hg19::chrX:125686784..125686830,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chrX:125686784..125686830,- to FFCP PHASE1:Hg19::chrX:125686784..125686830,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=139170 | |EntrezGene=139170 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29395 | |HGNC=29395 | ||
|TSSclassifier=strong | |||
|UniProt=Q5VU92 | |UniProt=Q5VU92 | ||
|association_with_transcript=3bp_to_ENST00000371126_5end | |||
|cluster_id=chrX:125686784..125686830,- | |||
|description=CAGE_peak_1_at_DCAF12L1_5end | |||
|id=chrX:125686784..125686830,- | |||
|ontology_enrichment_celltype=CL:1000497!1.17e-15!18;CL:0002518!1.17e-15!18;CL:1000449!4.23e-15!16;CL:1000507!1.22e-11!12;CL:1000494!1.22e-11!12;CL:0002543!1.56e-11!6;CL:0000075!1.89e-11!27;CL:0002681!1.24e-10!13;CL:0002584!1.24e-10!13;CL:0002322!3.76e-10!5;CL:0002078!4.36e-07!44;CL:0000239!5.28e-07!3;CL:1000615!5.28e-07!3;CL:0002306!5.28e-07!3;CL:0002618!6.65e-07!3;CL:0000071!7.76e-07!18;CL:0002546!7.76e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:1000497;1.73e-27;17!CL:0002518;1.73e-27;17!CL:1000449;3.84e-26;15!CL:1000507;2.86e-21;10!CL:1000494;2.86e-21;10!CL:0002322;8.14e-18;5!CL:0002681;1.20e-17;12!CL:0002584;1.20e-17;12!CL:0002543;1.33e-14;6!CL:0000239;7.76e-12;3!CL:1000615;7.76e-12;3!CL:0002306;7.76e-12;3!CL:0002618;1.24e-11;3!CL:0000075;6.43e-11;27!CL:0000148;2.25e-08;10!CL:0002188;6.13e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:1000497,1.94e-27,17;CL:0002518,1.94e-27,17;CL:1000449,4.37e-26,15;CL:1000507,2.91e-21,10;CL:1000494,2.91e-21,10;CL:0002322,8.75e-18,5;CL:0002681,1.36e-17,12;CL:0002584,1.36e-17,12;CL:0002543,1.10e-14,6;CL:0000239,7.50e-12,3;CL:1000615,7.50e-12,3;CL:0002306,7.50e-12,3;CL:0002618,1.16e-11,3;CL:0000075,6.90e-11,27;CL:0002078,8.53e-09,45;CL:0000066,1.74e-08,253;CL:0000148,2.40e-08,10;CL:0000541,2.40e-08,10;CL:0002188,6.72e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.20e-12;10!UBERON:0005564;2.20e-12;10!UBERON:0007297;2.23e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4468;3.84e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,4.75e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0004876!2.14e-18!20;UBERON:0000080!2.52e-18!18;UBERON:0002120!2.52e-18!18;UBERON:0004875!2.52e-18!18;UBERON:0005721!2.52e-18!18;UBERON:0005754!2.52e-18!18;UBERON:0007297!2.52e-18!18;UBERON:0003887!2.51e-17!21;UBERON:0002113!6.60e-17!27;UBERON:0003918!6.60e-17!27;UBERON:0005095!6.60e-17!27;UBERON:0007687!6.60e-17!27;UBERON:0000489!7.03e-17!32;UBERON:0006555!8.23e-17!17;UBERON:0005103!8.23e-17!17;UBERON:0000083!8.23e-17!17;UBERON:0009201!8.23e-17!17;UBERON:0004819!8.23e-17!17;UBERON:0006553!8.23e-17!17;UBERON:0003074!8.23e-17!17;UBERON:0003060!8.23e-17!17;UBERON:0000058!2.74e-15!26;UBERON:0004211!4.23e-15!16;UBERON:0001285!4.23e-15!16;UBERON:0007684!4.23e-15!16;UBERON:0003220!4.23e-15!16;UBERON:0004208!4.23e-15!16;UBERON:0009773!1.22e-11!12;UBERON:0001231!1.22e-11!12;UBERON:0004810!1.22e-11!12;UBERON:0006554!7.24e-11!44;UBERON:0001225!1.24e-10!13;UBERON:0008987!1.24e-10!13;UBERON:0003064!1.56e-10!37;UBERON:0001008!1.66e-10!45;UBERON:0003135!1.98e-10!11;UBERON:0003886!7.03e-10!63;UBERON:0005172!9.63e-10!55;UBERON:0005173!9.63e-10!55;UBERON:0000353!2.32e-09!17;UBERON:0002553!2.86e-08!70;UBERON:0001851!3.03e-08!16;UBERON:0002417!3.15e-08!61;UBERON:0000916!3.15e-08!61;UBERON:0003103!7.17e-08!69;UBERON:0000483!1.59e-07!309;UBERON:0001638!2.35e-07!9;UBERON:0003920!2.35e-07!9;UBERON:0004582!2.35e-07!9;UBERON:0000119!2.61e-07!312;UBERON:0000477!4.29e-07!286;UBERON:0006853!5.28e-07!3;UBERON:0007685!5.28e-07!3;UBERON:0004134!5.28e-07!3;UBERON:0006947!6.04e-07!3;UBERON:0004054!6.04e-07!3;UBERON:0001986!7.76e-07!18;UBERON:0004638!7.76e-07!18;UBERON:0004852!7.76e-07!18;UBERON:0000922!8.69e-07!612;UBERON:0004111!9.21e-07!241;UBERON:0000025!9.41e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;3.84e-26;15!UBERON:0004819;3.84e-26;15!UBERON:0001285;3.84e-26;15!UBERON:0007684;3.84e-26;15!UBERON:0002113;1.21e-25;24!UBERON:0011143;1.21e-25;24!UBERON:0004211;2.86e-21;10!UBERON:0009773;2.86e-21;10!UBERON:0001231;2.86e-21;10!UBERON:0004810;2.86e-21;10!UBERON:0000489;1.22e-20;29!UBERON:0006554;7.67e-20;30!UBERON:0001008;7.67e-20;30!UBERON:0001225;1.20e-17;12!UBERON:0008987;1.20e-17;12!UBERON:0003135;2.56e-15;11!UBERON:0001851;7.63e-14;15!UBERON:0000353;7.63e-14;15!UBERON:0006853;7.76e-12;3!UBERON:0007685;7.76e-12;3!UBERON:0004134;7.76e-12;3!UBERON:0006947;8.97e-12;3!UBERON:0004054;8.97e-12;3!UBERON:0000473;5.91e-11;8!UBERON:0001638;1.24e-09;9!UBERON:0003920;1.24e-09;9!UBERON:0004582;1.24e-09;9!UBERON:0005904;6.27e-09;4!UBERON:0005172;1.12e-08;52!UBERON:0005173;1.12e-08;52!UBERON:0002417;6.35e-08;58!UBERON:0000916;6.35e-08;58!UBERON:0000991;2.26e-07;21!UBERON:0003101;3.89e-07;22!UBERON:0000079;3.89e-07;22!UBERON:0002066;3.92e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,4.23e-31,26;UBERON:0003918,4.23e-31,26;UBERON:0011143,4.23e-31,26;UBERON:0005095,4.23e-31,26;UBERON:0007687,4.23e-31,26;UBERON:0006555,2.39e-29,16;UBERON:0004819,2.39e-29,16;UBERON:0004211,4.37e-26,15;UBERON:0009773,4.37e-26,15;UBERON:0001231,4.37e-26,15;UBERON:0001285,4.37e-26,15;UBERON:0007684,4.37e-26,15;UBERON:0004208,4.37e-26,15;UBERON:0000489,1.96e-25,31;UBERON:0004810,2.91e-21,10;UBERON:0001225,1.36e-17,12;UBERON:0008987,1.36e-17,12;UBERON:0005172,1.11e-16,54;UBERON:0005173,1.11e-16,54;UBERON:0006554,1.96e-15,47;UBERON:0003135,2.73e-15,11;UBERON:0001008,4.93e-15,48;UBERON:0002417,1.43e-14,60;UBERON:0000916,1.43e-14,60;UBERON:0001851,8.43e-14,15;UBERON:0000353,8.43e-14,15;UBERON:0006853,7.50e-12,3;UBERON:0007685,7.50e-12,3;UBERON:0004134,7.50e-12,3;UBERON:0006947,9.66e-12,3;UBERON:0004054,9.66e-12,3;UBERON:0000473,6.45e-11,8;UBERON:0000080,8.97e-10,9;UBERON:0002120,8.97e-10,9;UBERON:0004875,8.97e-10,9;UBERON:0005721,8.97e-10,9;UBERON:0005754,8.97e-10,9;UBERON:0007297,8.97e-10,9;UBERON:0001638,1.10e-09,9;UBERON:0003920,1.10e-09,9;UBERON:0004582,1.10e-09,9;UBERON:0003103,1.64e-09,68;UBERON:0005904,6.61e-09,4;UBERON:0003133,2.85e-08,48;UBERON:0004876,6.21e-08,11;UBERON:0005177,6.52e-08,101;UBERON:0005103,2.01e-07,8;UBERON:0000083,2.01e-07,8;UBERON:0009201,2.01e-07,8;UBERON:0006553,2.01e-07,8;UBERON:0003074,2.01e-07,8;UBERON:0003060,2.01e-07,8;UBERON:0000991,2.56e-07,21;UBERON:0009196,2.56e-07,21;UBERON:0009117,2.56e-07,21;UBERON:0005564,2.56e-07,21;UBERON:0003887,3.04e-07,12;UBERON:0002066,3.76e-07,5;UBERON:0003914,3.99e-07,117;UBERON:0003101,4.01e-07,22;UBERON:0000079,4.01e-07,22;UBERON:0004176,6.10e-07,22;UBERON:0003886,6.59e-07,54;UBERON:0009569,9.95e-07,112 | |||
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| ||
|short_description=p1@DCAF12L1 | |||
}} | }} |
Latest revision as of 08:37, 19 September 2015
Short description: | p1@DCAF12L1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DCAF12L1_5end |
Coexpression cluster: | NA |
Association with transcript: | 3bp_to_ENST00000371126_5end |
EntrezGene: | DCAF12L1 |
HGNC: | 29395 |
UniProt: | Q5VU92 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 1.94e-27 | 17 |
kidney epithelial cell | 1.94e-27 | 17 |
epithelial cell of nephron | 4.37e-26 | 15 |
kidney tubule cell | 2.91e-21 | 10 |
nephron tubule epithelial cell | 2.91e-21 | 10 |
embryonic stem cell | 8.75e-18 | 5 |
kidney cortical cell | 1.36e-17 | 12 |
renal cortical epithelial cell | 1.36e-17 | 12 |
vein endothelial cell | 1.10e-14 | 6 |
brush border epithelial cell | 7.50e-12 | 3 |
kidney cortex tubule cell | 7.50e-12 | 3 |
epithelial cell of proximal tubule | 7.50e-12 | 3 |
endothelial cell of umbilical vein | 1.16e-11 | 3 |
columnar/cuboidal epithelial cell | 6.90e-11 | 27 |
meso-epithelial cell | 8.53e-09 | 45 |
epithelial cell | 1.74e-08 | 253 |
melanocyte | 2.40e-08 | 10 |
melanoblast | 2.40e-08 | 10 |
glomerular endothelial cell | 6.72e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 4.75e-08 | 2 |