FFCP PHASE1:Hg19::chr4:926216..926285,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84286 | |EntrezGene=84286 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28709 | |HGNC=28709 | ||
|TSSclassifier=strong | |||
|UniProt=Q6NY19,D6RCD9,D3DVN5,D6RAJ5,D6RBE5,D6RHV8,D6RIZ2,E7ETE6,Q9BSA9 | |UniProt=Q6NY19,D6RCD9,D3DVN5,D6RAJ5,D6RBE5,D6RHV8,D6RIZ2,E7ETE6,Q9BSA9 | ||
|association_with_transcript=0bp_to_ENST00000359768,ENST00000438836,ENST00000452360,ENST00000504505,ENST00000504744,ENST00000504850,ENST00000505734,ENST00000508204,ENST00000509508,ENST00000510493,ENST00000513682,ENST00000514546,ENST00000515492,ENST00000515740,ENST00000515876,NM_032326,uc003gbp.1,uc003gbq.2,uc003gbr.2,uc003gbs.2,uc003gbt.2,uc003gbu.2,uc003gbv.2,uc010ibl.1_5end | |association_with_transcript=0bp_to_ENST00000359768,ENST00000438836,ENST00000452360,ENST00000504505,ENST00000504744,ENST00000504850,ENST00000505734,ENST00000508204,ENST00000509508,ENST00000510493,ENST00000513682,ENST00000514546,ENST00000515492,ENST00000515740,ENST00000515876,NM_032326,uc003gbp.1,uc003gbq.2,uc003gbr.2,uc003gbs.2,uc003gbt.2,uc003gbu.2,uc003gbv.2,uc010ibl.1_5end | ||
|cluster_id=chr4:926216..926285,+ | |||
|description=CAGE_peak_1_at_TMEM175_5end | |description=CAGE_peak_1_at_TMEM175_5end | ||
|id=chr4:926216..926285,+ | |id=chr4:926216..926285,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.06e-07;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.45e-33!115;UBERON:0001049!1.14e-25!57;UBERON:0005068!1.14e-25!57;UBERON:0006241!1.14e-25!57;UBERON:0007135!1.14e-25!57;UBERON:0002616!7.48e-24!59;UBERON:0000955!6.61e-23!69;UBERON:0006238!6.61e-23!69;UBERON:0001017!9.96e-21!82;UBERON:0002780!1.22e-19!41;UBERON:0001890!1.22e-19!41;UBERON:0006240!1.22e-19!41;UBERON:0003080!1.96e-19!42;UBERON:0005743!8.22e-19!86;UBERON:0000073!6.60e-18!94;UBERON:0001016!6.60e-18!94;UBERON:0001893!1.04e-15!34;UBERON:0002020!1.86e-15!34;UBERON:0003528!1.86e-15!34;UBERON:0002791!3.75e-15!33;UBERON:0001869!1.01e-14!32;UBERON:0002619!1.12e-13!22;UBERON:0003075!4.93e-13!86;UBERON:0007284!4.93e-13!86;UBERON:0001950!1.29e-12!20;UBERON:0002346!2.14e-11!90;UBERON:0000956!5.24e-11!25;UBERON:0000203!5.24e-11!25;UBERON:0003056!4.56e-10!61;UBERON:0000153!8.62e-09!129;UBERON:0007811!8.62e-09!129;UBERON:0000033!3.04e-08!123;UBERON:0003076!2.04e-07!15;UBERON:0003057!2.04e-07!15 | |ontology_enrichment_uberon=UBERON:0007023!1.45e-33!115;UBERON:0001049!1.14e-25!57;UBERON:0005068!1.14e-25!57;UBERON:0006241!1.14e-25!57;UBERON:0007135!1.14e-25!57;UBERON:0002616!7.48e-24!59;UBERON:0000955!6.61e-23!69;UBERON:0006238!6.61e-23!69;UBERON:0001017!9.96e-21!82;UBERON:0002780!1.22e-19!41;UBERON:0001890!1.22e-19!41;UBERON:0006240!1.22e-19!41;UBERON:0003080!1.96e-19!42;UBERON:0005743!8.22e-19!86;UBERON:0000073!6.60e-18!94;UBERON:0001016!6.60e-18!94;UBERON:0001893!1.04e-15!34;UBERON:0002020!1.86e-15!34;UBERON:0003528!1.86e-15!34;UBERON:0002791!3.75e-15!33;UBERON:0001869!1.01e-14!32;UBERON:0002619!1.12e-13!22;UBERON:0003075!4.93e-13!86;UBERON:0007284!4.93e-13!86;UBERON:0001950!1.29e-12!20;UBERON:0002346!2.14e-11!90;UBERON:0000956!5.24e-11!25;UBERON:0000203!5.24e-11!25;UBERON:0003056!4.56e-10!61;UBERON:0000153!8.62e-09!129;UBERON:0007811!8.62e-09!129;UBERON:0000033!3.04e-08!123;UBERON:0003076!2.04e-07!15;UBERON:0003057!2.04e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.26e-14;41!UBERON:0001890;2.26e-14;41!UBERON:0000073;4.03e-14;53!UBERON:0002616;4.03e-14;53!UBERON:0002619;9.68e-14;22!UBERON:0001893;1.90e-13;34!UBERON:0001869;2.82e-13;32!UBERON:0003528;2.83e-13;34!UBERON:0002020;2.83e-13;34!UBERON:0002791;3.71e-13;32!UBERON:0001950;1.15e-12;20!UBERON:0000956;4.44e-11;25!UBERON:0000203;4.44e-11;25!UBERON:0001017;5.64e-11;75!UBERON:0000955;2.02e-10;68!UBERON:0007023;1.06e-09;114!UBERON:0001016;1.16e-08;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.27e-33,114;UBERON:0001049,7.28e-26,56;UBERON:0005068,7.28e-26,56;UBERON:0006241,7.28e-26,56;UBERON:0007135,7.28e-26,56;UBERON:0000073,2.00e-24,53;UBERON:0002616,2.00e-24,53;UBERON:0000955,5.15e-23,68;UBERON:0006238,5.15e-23,68;UBERON:0001017,8.70e-21,81;UBERON:0001016,1.16e-19,89;UBERON:0002780,1.22e-19,41;UBERON:0001890,1.22e-19,41;UBERON:0003080,1.22e-19,41;UBERON:0006240,1.22e-19,41;UBERON:0001893,1.04e-15,34;UBERON:0003075,1.75e-15,82;UBERON:0007284,1.75e-15,82;UBERON:0003528,1.86e-15,34;UBERON:0002020,1.86e-15,34;UBERON:0001869,1.01e-14,32;UBERON:0002791,1.49e-14,32;UBERON:0002619,1.12e-13,22;UBERON:0002346,1.42e-13,86;UBERON:0001950,1.29e-12,20;UBERON:0010371,5.33e-12,104;UBERON:0000956,5.24e-11,25;UBERON:0000203,5.24e-11,25;UBERON:0003056,1.39e-10,61;UBERON:0003076,2.04e-07,15;UBERON:0003057,2.04e-07,15;UBERON:0004121,5.43e-07,171;UBERON:0000924,5.43e-07,171;UBERON:0006601,5.43e-07,171 | |||
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|short_description=p1@TMEM175 | |short_description=p1@TMEM175 | ||
}} | }} |
Latest revision as of 09:21, 19 September 2015
Short description: | p1@TMEM175 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TMEM175_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000359768, ENST00000438836, ENST00000452360, ENST00000504505, ENST00000504744, ENST00000504850, ENST00000505734, ENST00000508204, ENST00000509508, ENST00000510493, ENST00000513682, ENST00000514546, ENST00000515492, ENST00000515740, ENST00000515876, NM_032326, uc003gbp.1, uc003gbq.2, uc003gbr.2, uc003gbs.2, uc003gbt.2, uc003gbu.2, uc003gbv.2, uc010ibl.1_5end |
EntrezGene: | TMEM175 |
HGNC: | 28709 |
UniProt: | Q6NY19D6RCD9D3DVN5D6RAJ5D6RBE5D6RHV8D6RIZ2E7ETE6Q9BSA9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 5.27e-33 | 114 |
neural tube | 7.28e-26 | 56 |
neural rod | 7.28e-26 | 56 |
future spinal cord | 7.28e-26 | 56 |
neural keel | 7.28e-26 | 56 |
regional part of nervous system | 2.00e-24 | 53 |
regional part of brain | 2.00e-24 | 53 |
brain | 5.15e-23 | 68 |
future brain | 5.15e-23 | 68 |
central nervous system | 8.70e-21 | 81 |
nervous system | 1.16e-19 | 89 |
regional part of forebrain | 1.22e-19 | 41 |
forebrain | 1.22e-19 | 41 |
anterior neural tube | 1.22e-19 | 41 |
future forebrain | 1.22e-19 | 41 |
telencephalon | 1.04e-15 | 34 |
neural plate | 1.75e-15 | 82 |
presumptive neural plate | 1.75e-15 | 82 |
brain grey matter | 1.86e-15 | 34 |
gray matter | 1.86e-15 | 34 |
cerebral hemisphere | 1.01e-14 | 32 |
regional part of telencephalon | 1.49e-14 | 32 |
regional part of cerebral cortex | 1.12e-13 | 22 |
neurectoderm | 1.42e-13 | 86 |
neocortex | 1.29e-12 | 20 |
ecto-epithelium | 5.33e-12 | 104 |
cerebral cortex | 5.24e-11 | 25 |
pallium | 5.24e-11 | 25 |
pre-chordal neural plate | 1.39e-10 | 61 |
posterior neural tube | 2.04e-07 | 15 |
chordal neural plate | 2.04e-07 | 15 |
ectoderm-derived structure | 5.43e-07 | 171 |
ectoderm | 5.43e-07 | 171 |
presumptive ectoderm | 5.43e-07 | 171 |