FFCP PHASE1:Hg19::chr3:65535168..65535181,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9223 | |EntrezGene=9223 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=946 | |HGNC=946 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000476403_5end | |association_with_transcript=0bp_to_ENST00000476403_5end | ||
|cluster_id=chr3:65535168..65535181,- | |||
|description=CAGE_peak_10_at_MAGI1_5end | |description=CAGE_peak_10_at_MAGI1_5end | ||
|id=chr3:65535168..65535181,- | |id=chr3:65535168..65535181,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002319;1.12e-12;25!CL:0002605;1.18e-12;3!CL:0000128;3.21e-09;7!CL:0000126;3.21e-09;7!CL:0000127;3.21e-09;7!CL:0000047;4.76e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.21e-12,25;CL:0002605,2.02e-12,3;CL:0000047,6.47e-12,8;CL:0000128,3.16e-09,7;CL:0000126,3.16e-09,7;CL:0000127,3.16e-09,7;CL:0002453,3.16e-09,7;CL:0000133,8.61e-07,59 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;1.44e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.56e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!7.15e-32!115;UBERON:0002346!1.78e-29!90;UBERON:0001049!4.29e-29!57;UBERON:0005068!4.29e-29!57;UBERON:0006241!4.29e-29!57;UBERON:0007135!4.29e-29!57;UBERON:0003075!8.89e-29!86;UBERON:0007284!8.89e-29!86;UBERON:0005743!1.24e-27!86;UBERON:0001017!3.47e-27!82;UBERON:0002780!1.24e-26!41;UBERON:0001890!1.24e-26!41;UBERON:0006240!1.24e-26!41;UBERON:0000073!3.64e-26!94;UBERON:0001016!3.64e-26!94;UBERON:0003080!9.78e-26!42;UBERON:0001893!1.51e-25!34;UBERON:0002020!2.21e-25!34;UBERON:0003528!2.21e-25!34;UBERON:0002791!1.25e-24!33;UBERON:0000924!1.27e-24!173;UBERON:0006601!1.27e-24!173;UBERON:0003056!1.54e-24!61;UBERON:0004121!8.67e-24!169;UBERON:0001869!1.48e-23!32;UBERON:0002616!5.46e-23!59;UBERON:0000956!9.26e-22!25;UBERON:0000203!9.26e-22!25;UBERON:0000955!3.75e-21!69;UBERON:0006238!3.75e-21!69;UBERON:0000153!5.97e-21!129;UBERON:0007811!5.97e-21!129;UBERON:0000033!3.72e-20!123;UBERON:0002619!3.49e-18!22;UBERON:0001950!3.93e-18!20;UBERON:0000481!3.14e-09!347;UBERON:0000477!8.16e-08!286;UBERON:0000064!1.23e-07!219;UBERON:0000475!1.84e-07!365;UBERON:0002021!3.36e-07!5;UBERON:0000025!9.55e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0000956;4.16e-16;25!UBERON:0000203;4.16e-16;25!UBERON:0002791;8.58e-12;32!UBERON:0001869;9.15e-12;32!UBERON:0003528;1.18e-10;34!UBERON:0002020;1.18e-10;34!UBERON:0002780;1.29e-10;41!UBERON:0001890;1.29e-10;41!UBERON:0001893;3.28e-10;34!UBERON:0002619;1.11e-09;22!UBERON:0001950;2.65e-08;20!UBERON:0002021;1.29e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,9.80e-17,89;UBERON:0000956,8.71e-16,25;UBERON:0000203,8.71e-16,25;UBERON:0001017,1.78e-15,81;UBERON:0002780,1.21e-12,41;UBERON:0001890,1.21e-12,41;UBERON:0003080,1.21e-12,41;UBERON:0006240,1.21e-12,41;UBERON:0002791,5.86e-12,32;UBERON:0001869,5.86e-12,32;UBERON:0004121,8.58e-12,171;UBERON:0000924,8.58e-12,171;UBERON:0006601,8.58e-12,171;UBERON:0002346,2.13e-11,86;UBERON:0003528,3.79e-11,34;UBERON:0002020,3.79e-11,34;UBERON:0001893,3.79e-11,34;UBERON:0003075,8.44e-11,82;UBERON:0007284,8.44e-11,82;UBERON:0003056,1.87e-10,61;UBERON:0001049,3.46e-10,56;UBERON:0005068,3.46e-10,56;UBERON:0006241,3.46e-10,56;UBERON:0007135,3.46e-10,56;UBERON:0002619,1.69e-09,22;UBERON:0000073,3.22e-09,53;UBERON:0002616,3.22e-09,53;UBERON:0000955,5.09e-09,68;UBERON:0006238,5.09e-09,68;UBERON:0010371,7.86e-09,104;UBERON:0001950,4.22e-08,20;UBERON:0002021,1.66e-07,5;UBERON:0010314,6.15e-07,132 | |||
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| ||
|short_description=p10@MAGI1 | |short_description=p10@MAGI1 | ||
}} | }} |
Latest revision as of 10:01, 19 September 2015
Short description: | p10@MAGI1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_MAGI1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000476403_5end |
EntrezGene: | MAGI1 |
HGNC: | 946 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.21e-12 | 25 |
astrocyte of the cerebral cortex | 2.02e-12 | 3 |
neuronal stem cell | 6.47e-12 | 8 |
oligodendrocyte | 3.16e-09 | 7 |
macroglial cell | 3.16e-09 | 7 |
astrocyte | 3.16e-09 | 7 |
oligodendrocyte precursor cell | 3.16e-09 | 7 |
neurectodermal cell | 8.61e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
nervous system | 9.80e-17 | 89 |
cerebral cortex | 8.71e-16 | 25 |
pallium | 8.71e-16 | 25 |
central nervous system | 1.78e-15 | 81 |
regional part of forebrain | 1.21e-12 | 41 |
forebrain | 1.21e-12 | 41 |
anterior neural tube | 1.21e-12 | 41 |
future forebrain | 1.21e-12 | 41 |
regional part of telencephalon | 5.86e-12 | 32 |
cerebral hemisphere | 5.86e-12 | 32 |
ectoderm-derived structure | 8.58e-12 | 171 |
ectoderm | 8.58e-12 | 171 |
presumptive ectoderm | 8.58e-12 | 171 |
neurectoderm | 2.13e-11 | 86 |
brain grey matter | 3.79e-11 | 34 |
gray matter | 3.79e-11 | 34 |
telencephalon | 3.79e-11 | 34 |
neural plate | 8.44e-11 | 82 |
presumptive neural plate | 8.44e-11 | 82 |
pre-chordal neural plate | 1.87e-10 | 61 |
neural tube | 3.46e-10 | 56 |
neural rod | 3.46e-10 | 56 |
future spinal cord | 3.46e-10 | 56 |
neural keel | 3.46e-10 | 56 |
regional part of cerebral cortex | 1.69e-09 | 22 |
regional part of nervous system | 3.22e-09 | 53 |
regional part of brain | 3.22e-09 | 53 |
brain | 5.09e-09 | 68 |
future brain | 5.09e-09 | 68 |
ecto-epithelium | 7.86e-09 | 104 |
neocortex | 4.22e-08 | 20 |
occipital lobe | 1.66e-07 | 5 |
structure with developmental contribution from neural crest | 6.15e-07 | 132 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.56e-08 | 2 |