FFCP PHASE1:Hg19::chr11:66139068..66139120,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3177 | |EntrezGene=3177 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11004 | |HGNC=11004 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000541567,uc009yrf.2,uc010rpb.1_5end | |association_with_transcript=0bp_to_ENST00000541567,uc009yrf.2,uc010rpb.1_5end | ||
|cluster_id=chr11:66139068..66139120,- | |||
|coexpression_cluster_id=C3192 | |coexpression_cluster_id=C3192 | ||
|description=CAGE_peak_2_at_SLC29A2_5end | |description=CAGE_peak_2_at_SLC29A2_5end | ||
|id=chr11:66139068..66139120,- | |id=chr11:66139068..66139120,- | ||
|ontology_enrichment_celltype=CL:0000066!1.86e-30!254;CL:0002076!5.49e-15!43;CL:0000223!1.13e-10!59;CL:0000082!5.10e-08!19;CL:0002368!1.25e-07!13;CL:0000039!2.48e-07!7;CL:0000586!2.48e-07!7;CL:0002251!2.96e-07!21 | |ontology_enrichment_celltype=CL:0000066!1.86e-30!254;CL:0002076!5.49e-15!43;CL:0000223!1.13e-10!59;CL:0000082!5.10e-08!19;CL:0002368!1.25e-07!13;CL:0000039!2.48e-07!7;CL:0000586!2.48e-07!7;CL:0002251!2.96e-07!21 | ||
|ontology_enrichment_celltype_v019=CL:0002076;1.35e-17;42!CL:0002368;3.12e-11;13!CL:0000039;1.14e-10;7!CL:0000586;1.14e-10;7!CL:0002251;1.67e-09;20!CL:0000082;5.71e-09;19!CL:0002202;4.90e-08;9!CL:0002632;4.90e-08;9!CL:1000507;1.14e-07;10!CL:1000494;1.14e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.45e-40,253;CL:0002076,7.32e-23,42;CL:0000223,1.64e-16,58;CL:0002368,1.56e-11,13;CL:0000039,1.05e-10,7;CL:0000586,1.05e-10,7;CL:0002251,1.62e-09,20;CL:0000082,4.14e-09,19;CL:0002202,2.96e-08,9;CL:0002632,2.96e-08,9;CL:1000507,8.48e-08,10;CL:1000494,8.48e-08,10 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.43e-09;29!CL:0000223;5.95e-09;58 | |||
|ontology_enrichment_disease=DOID:305!2.02e-35!106;DOID:0050687!1.37e-27!143;DOID:162!2.79e-19!235;DOID:14566!5.28e-18!239;DOID:299!3.85e-11!25;DOID:1749!7.38e-09!14;DOID:0050686!5.77e-07!137 | |ontology_enrichment_disease=DOID:305!2.02e-35!106;DOID:0050687!1.37e-27!143;DOID:162!2.79e-19!235;DOID:14566!5.28e-18!239;DOID:299!3.85e-11!25;DOID:1749!7.38e-09!14;DOID:0050686!5.77e-07!137 | ||
|ontology_enrichment_disease_v019=DOID:299;8.99e-16;25!DOID:305;6.63e-14;106!DOID:1749;3.57e-12;14!DOID:0050687;2.51e-07;143!DOID:5093;3.41e-07;4!DOID:1612;3.41e-07;4!DOID:0050615;5.67e-07;16 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.26e-42,106;DOID:0050687,2.52e-33,143;DOID:162,1.47e-19,235;DOID:14566,1.24e-18,239;DOID:299,1.22e-15,25;DOID:1749,3.10e-12,14;DOID:5093,3.43e-07,4;DOID:1612,3.43e-07,4;DOID:0050615,5.50e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.74e-19!169;UBERON:0000925!3.74e-19!169;UBERON:0006595!3.74e-19!169;UBERON:0001007!5.68e-16!155;UBERON:0001555!5.68e-16!155;UBERON:0007026!5.68e-16!155;UBERON:0004921!1.30e-15!129;UBERON:0004185!1.30e-15!129;UBERON:0001004!3.53e-15!72;UBERON:0000065!6.61e-14!53;UBERON:0008947!2.05e-13!38;UBERON:0003258!2.05e-13!38;UBERON:0000077!3.87e-13!130;UBERON:0000072!1.01e-11!46;UBERON:0000464!1.09e-11!104;UBERON:0005153!1.15e-10!37;UBERON:0001041!1.24e-10!98;UBERON:0000064!2.60e-10!219;UBERON:0000063!7.40e-10!97;UBERON:0005181!1.51e-09!35;UBERON:0005178!4.62e-09!34;UBERON:0002224!4.62e-09!34;UBERON:0005157!4.87e-09!51;UBERON:0000466!1.46e-08!126;UBERON:0005409!1.64e-08!35;UBERON:0005177!1.68e-08!107;UBERON:0002048!3.64e-08!22;UBERON:0000117!3.64e-08!22;UBERON:0000171!3.64e-08!22;UBERON:0000170!3.64e-08!22;UBERON:0005597!3.64e-08!22;UBERON:0000118!3.64e-08!22;UBERON:0004802!5.10e-08!19;UBERON:0000115!5.10e-08!19;UBERON:0005911!7.80e-08!82;UBERON:0000344!3.78e-07!12;UBERON:0000915!4.61e-07!52;UBERON:0004807!7.75e-07!28 | |ontology_enrichment_uberon=UBERON:0004119!3.74e-19!169;UBERON:0000925!3.74e-19!169;UBERON:0006595!3.74e-19!169;UBERON:0001007!5.68e-16!155;UBERON:0001555!5.68e-16!155;UBERON:0007026!5.68e-16!155;UBERON:0004921!1.30e-15!129;UBERON:0004185!1.30e-15!129;UBERON:0001004!3.53e-15!72;UBERON:0000065!6.61e-14!53;UBERON:0008947!2.05e-13!38;UBERON:0003258!2.05e-13!38;UBERON:0000077!3.87e-13!130;UBERON:0000072!1.01e-11!46;UBERON:0000464!1.09e-11!104;UBERON:0005153!1.15e-10!37;UBERON:0001041!1.24e-10!98;UBERON:0000064!2.60e-10!219;UBERON:0000063!7.40e-10!97;UBERON:0005181!1.51e-09!35;UBERON:0005178!4.62e-09!34;UBERON:0002224!4.62e-09!34;UBERON:0005157!4.87e-09!51;UBERON:0000466!1.46e-08!126;UBERON:0005409!1.64e-08!35;UBERON:0005177!1.68e-08!107;UBERON:0002048!3.64e-08!22;UBERON:0000117!3.64e-08!22;UBERON:0000171!3.64e-08!22;UBERON:0000170!3.64e-08!22;UBERON:0005597!3.64e-08!22;UBERON:0000118!3.64e-08!22;UBERON:0004802!5.10e-08!19;UBERON:0000115!5.10e-08!19;UBERON:0005911!7.80e-08!82;UBERON:0000344!3.78e-07!12;UBERON:0000915!4.61e-07!52;UBERON:0004807!7.75e-07!28 | ||
|ontology_enrichment_uberon_v019=UBERON:0000065;5.10e-12;44!UBERON:0000072;2.69e-11;37!UBERON:0005911;2.93e-10;36!UBERON:0004807;1.24e-09;22!UBERON:0004802;5.71e-09;19!UBERON:0000115;5.71e-09;19!UBERON:0002048;1.60e-08;22!UBERON:0000117;1.60e-08;22!UBERON:0000171;1.60e-08;22!UBERON:0000170;1.60e-08;22!UBERON:0005409;4.72e-08;22!UBERON:0004211;1.14e-07;10!UBERON:0009773;1.14e-07;10!UBERON:0001231;1.14e-07;10!UBERON:0004810;1.14e-07;10!UBERON:0005181;1.45e-07;35!UBERON:0001004;1.67e-07;65!UBERON:0005178;4.56e-07;34!UBERON:0002224;4.56e-07;34!UBERON:0002294;5.29e-07;7!UBERON:0001173;5.29e-07;7!UBERON:0006554;5.77e-07;30!UBERON:0001008;5.77e-07;30!UBERON:0001737;6.40e-07;9!UBERON:0001557;6.40e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.36e-17,160;UBERON:0000925,2.36e-17,160;UBERON:0006595,2.36e-17,160;UBERON:0001007,4.71e-14,145;UBERON:0001555,4.71e-14,145;UBERON:0007026,4.71e-14,145;UBERON:0008947,6.90e-14,38;UBERON:0003258,6.90e-14,38;UBERON:0001004,1.92e-12,74;UBERON:0004921,2.13e-12,118;UBERON:0000065,2.41e-12,54;UBERON:0005153,2.64e-11,37;UBERON:0000072,5.32e-10,47;UBERON:0005911,7.41e-10,82;UBERON:0005157,1.26e-09,47;UBERON:0004802,4.14e-09,19;UBERON:0000115,4.14e-09,19;UBERON:0005177,1.29e-08,101;UBERON:0002048,1.30e-08,22;UBERON:0000117,1.30e-08,22;UBERON:0000171,1.30e-08,22;UBERON:0000170,1.30e-08,22;UBERON:0005597,1.30e-08,22;UBERON:0000118,1.30e-08,22;UBERON:0005181,1.49e-08,35;UBERON:0006554,3.67e-08,47;UBERON:0005178,6.48e-08,34;UBERON:0002224,6.48e-08,34;UBERON:0001008,7.25e-08,48;UBERON:0004810,8.48e-08,10;UBERON:0009569,1.16e-07,112;UBERON:0000915,1.48e-07,52;UBERON:0001041,6.73e-07,87;UBERON:0001737,7.58e-07,9;UBERON:0004807,8.00e-07,28 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,1.96587149201207,34.8900583986214,0.436882744260345,0.527533956456907,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0.0787107813136792,0,0,0,1.83884244895785,3.0120591877825,4.43704812200145,1.08454080812422,1.27952309238679,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0.411202997999018,0.334372990781356,0.651844533267181,0.473447805734733,0,0,0,0.221533894583621,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383959833463255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443458794925128,0.175669571386252,0.785874452986276,13.8432209551166,3.70784442784429,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,1.74437620857014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,1.09098448236334,1.72082757233402,3.53723747775827,5.30119073285941,3.48581828608555,3.10983165046111,3.78481276313443,1.82488679537915,0,0,0,0,0,2.36613600079688,1.01150814046861,0.723033089650446,2.86764329104224,1.74303555273925,1.42362371466658,1.21348177344148,2.15843611637881,4.23221872641029,0.738155454624648,0,0,0,0,0,0,0.441463099414651,10.4540172761647,0,5.1582634142054,1.1240175325762,4.32274581370013,3.24059558054854,0,0,0,0.115930404975077,0.117408694235822,0,0.462985512576611,0,16.5942923571448,24.0376125386564,0,0,0,0,0,0.567100388969546,0.358234090811393,1.45316969256981,1.53353071666084,0,0,0,0,0.25248486685276,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.877350463246,2.40607764363942,6.44566922551274,0,0,0.131124414959424,13.5359883872224,6.39227297966643,4.70609861506113,2.92278449306521,1.89992932007176,0,0,0,0,0,0,9.94017464875649,26.5944322857192,2.23874754722178,0,0,0.256450125116389,0,0,1.03041011647722,0,0,2.29706215198469,1.95018073810956,0,0,0.154048617114644,0.15350367472613,0,0.107420244868274,0,0,0,1.65284915360978,1.34533047155574,3.57315594984836,2.8324178639554,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,1.63577591633371,6.70302275535787,10.8890984861323,1.12972560932135,2.58303223602738,1.68471475667626,0.443430153536676,1.1486170010348,0,0,0,0,0,0,0,0,0.640944426764839,0,11.7619303670895,0,0,0,0,0.59873811429845,0,0.211673582723883,0,0.280797178113459,0,0.94007937463814,0,0.169291777801603,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,32.9367351118467,0.146508179271894,1.33496573924465,0.111443384277478,0,1.67121139316383,0,0.614321404198464,0,0.140669416410513,0,0.824019371133798,0.211125408127993,0,1.10513566212459,1.76352923497993,0.20453736500431,0.369254416383208,0,13.749857725541,6.08671993897071,0,0.0986434056369336,0,0,0,0,0,18.4903710370516,30.0862399986913,0,8.53450862141247,13.4754434655166,23.8751558585616,0.344743373241465,0.291604613383254,0,0,0.361789315876224,3.05163472634166,0.221158519862449,0.591095237907095,0.438770794307945,1.0893846351899,1.81250867562184,0.307801034015188,0,16.8311650203284,23.8755334129994,70.9467338650713,0.957003479195758,0.457987967009312,1.06606955203727,1.02193298195737,0,0,2.03036094555463,2.15668787749514,2.68514539161348,0.75901493089674,0.317873157960757,2.95397290339238,1.14262965711403,8.19847814316857,1.08194319871046,7.96209544862804,2.12298154808014,2.4441205797345,0.593042257361244,0,0,0.067401132980677,2.40773294189637,0,0.547364367646998,13.5008587063142,0.971121518136371,0,7.25944296291983,0,0,0,0.207376382794494,0.664653872707185,0.330991955875499,0.313932918407225,0,9.10750547295337,0,7.63662848674576,2.84177952501695,8.53180224487945,1.04836000945218,0,8.22428815957224,9.64778985537649,7.71885296300167,0.678923115418936,0,0.451961481561065,0,0,0,21.3151007180935,8.81747022766871,1.06726497369676,0.19980960958213,15.7058554697976,0.687219576995494,0.171594997861965,0.864328787928898,0.248505071130865,5.65665683080309,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,19.1691840479031,0,0,0,0,0,0,0,0,0,3.72562661089452,0,0,5.14410075088061,4.40126197111148,5.81616473240859,0,0,0,0,3.78267395036151,4.56354916774483,0.528001682597033,0.35857467866569,20.7268413105001,0,0.662091970365432,1.77987976358325,0,0,0,0,0.328370082997356,0,0,0,0,0.129282956361551,0,1.53978154095896,23.2588957364502,2.0289608387862,0,0.828478110694391,0,0.395223263795889,0.487170393523584,9.57511886655273,0,0,0.306345576763462,0,9.89440806376476,0,0.122026264901963,0.1251909307065,0,0.332787154610557,0.0620964029413835,0.830091809617385,0.124980407962107,0.303298235083296,0,0,4.21501415226193,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428883182749851,0,0,0,0.24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| ||
|short_description=p2@SLC29A2 | |short_description=p2@SLC29A2 | ||
}} | }} |
Latest revision as of 14:16, 19 September 2015
Short description: | p2@SLC29A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SLC29A2_5end |
Coexpression cluster: | C3192_choriocarcinoma_rectal_breast_pancreatic_adenocarcinoma_Alveolar_Renal |
Association with transcript: | 0bp_to_ENST00000541567, uc009yrf.2, uc010rpb.1_5end |
EntrezGene: | SLC29A2 |
HGNC: | 11004 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.45e-40 | 253 |
endo-epithelial cell | 7.32e-23 | 42 |
endodermal cell | 1.64e-16 | 58 |
respiratory epithelial cell | 1.56e-11 | 13 |
germ line cell | 1.05e-10 | 7 |
germ cell | 1.05e-10 | 7 |
epithelial cell of alimentary canal | 1.62e-09 | 20 |
epithelial cell of lung | 4.14e-09 | 19 |
epithelial cell of tracheobronchial tree | 2.96e-08 | 9 |
epithelial cell of lower respiratory tract | 2.96e-08 | 9 |
kidney tubule cell | 8.48e-08 | 10 |
nephron tubule epithelial cell | 8.48e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.26e-42 | 106 |
cell type cancer | 2.52e-33 | 143 |
cancer | 1.47e-19 | 235 |
disease of cellular proliferation | 1.24e-18 | 239 |
adenocarcinoma | 1.22e-15 | 25 |
squamous cell carcinoma | 3.10e-12 | 14 |
thoracic cancer | 3.43e-07 | 4 |
breast cancer | 3.43e-07 | 4 |
respiratory system cancer | 5.50e-07 | 16 |