FFCP PHASE1:Hg19::chrX:135579762..135579777,+: Difference between revisions
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(Created page with "{{FFCP
|id=chrX:135579762..135579777,+
|short_description=p3@HTATSF1
|description=CAGE_peak_3_at_HTATSF1_5end
|association_with_transcript=42bp_to_ENST00000415377_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=27336 | |EntrezGene=27336 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5276 | |HGNC=5276 | ||
|TSSclassifier=strong | |||
|UniProt=E9PFP2 | |UniProt=E9PFP2 | ||
|association_with_transcript=42bp_to_ENST00000415377_5end | |||
|cluster_id=chrX:135579762..135579777,+ | |||
|description=CAGE_peak_3_at_HTATSF1_5end | |||
|id=chrX:135579762..135579777,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!7.80e-16!94;UBERON:0001016!7.80e-16!94;UBERON:0005743!1.25e-15!86;UBERON:0001017!1.38e-15!82;UBERON:0000955!2.46e-12!69;UBERON:0006238!2.46e-12!69;UBERON:0001049!1.08e-11!57;UBERON:0005068!1.08e-11!57;UBERON:0006241!1.08e-11!57;UBERON:0007135!1.08e-11!57;UBERON:0002616!4.54e-10!59;UBERON:0002346!4.99e-10!90;UBERON:0003075!1.44e-09!86;UBERON:0007284!1.44e-09!86;UBERON:0002780!1.70e-09!41;UBERON:0001890!1.70e-09!41;UBERON:0006240!1.70e-09!41;UBERON:0000924!2.32e-09!173;UBERON:0006601!2.32e-09!173;UBERON:0004121!6.38e-09!169;UBERON:0003080!9.84e-09!42;UBERON:0003056!1.58e-07!61;UBERON:0002020!1.92e-07!34;UBERON:0003528!1.92e-07!34;UBERON:0000033!3.32e-07!123;UBERON:0001893!3.67e-07!34;UBERON:0002791!7.15e-07!33;UBERON:0000153!8.05e-07!129;UBERON:0007811!8.05e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;3.59e-08;53!UBERON:0002616;3.59e-08;53!UBERON:0002780;7.19e-08;41!UBERON:0001890;7.19e-08;41!UBERON:0003528;2.49e-07;34!UBERON:0002020;2.49e-07;34!UBERON:0001893;4.61e-07;34!UBERON:0002791;6.80e-07;32!UBERON:0001869;9.05e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.57e-17,81;UBERON:0001016,3.34e-16,89;UBERON:0001049,9.82e-14,56;UBERON:0005068,9.82e-14,56;UBERON:0006241,9.82e-14,56;UBERON:0007135,9.82e-14,56;UBERON:0002346,2.52e-13,86;UBERON:0000955,4.04e-13,68;UBERON:0006238,4.04e-13,68;UBERON:0003075,9.51e-13,82;UBERON:0007284,9.51e-13,82;UBERON:0000073,2.30e-12,53;UBERON:0002616,2.30e-12,53;UBERON:0002780,9.13e-11,41;UBERON:0001890,9.13e-11,41;UBERON:0003080,9.13e-11,41;UBERON:0006240,9.13e-11,41;UBERON:0004121,1.03e-10,171;UBERON:0000924,1.03e-10,171;UBERON:0006601,1.03e-10,171;UBERON:0003056,1.09e-10,61;UBERON:0010371,9.13e-09,104;UBERON:0003528,2.19e-08,34;UBERON:0002020,2.19e-08,34;UBERON:0001893,4.66e-08,34;UBERON:0001869,2.05e-07,32;UBERON:0002791,2.07e-07,32;UBERON:0011216,9.97e-07,223 | |||
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| ||
|short_description=p3@HTATSF1 | |||
}} | }} |
Latest revision as of 14:45, 19 September 2015
Short description: | p3@HTATSF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HTATSF1_5end |
Coexpression cluster: | NA |
Association with transcript: | 42bp_to_ENST00000415377_5end |
EntrezGene: | HTATSF1 |
HGNC: | 5276 |
UniProt: | E9PFP2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system | 7.57e-17 | 81 |
nervous system | 3.34e-16 | 89 |
neural tube | 9.82e-14 | 56 |
neural rod | 9.82e-14 | 56 |
future spinal cord | 9.82e-14 | 56 |
neural keel | 9.82e-14 | 56 |
neurectoderm | 2.52e-13 | 86 |
brain | 4.04e-13 | 68 |
future brain | 4.04e-13 | 68 |
neural plate | 9.51e-13 | 82 |
presumptive neural plate | 9.51e-13 | 82 |
regional part of nervous system | 2.30e-12 | 53 |
regional part of brain | 2.30e-12 | 53 |
regional part of forebrain | 9.13e-11 | 41 |
forebrain | 9.13e-11 | 41 |
anterior neural tube | 9.13e-11 | 41 |
future forebrain | 9.13e-11 | 41 |
ectoderm-derived structure | 1.03e-10 | 171 |
ectoderm | 1.03e-10 | 171 |
presumptive ectoderm | 1.03e-10 | 171 |
pre-chordal neural plate | 1.09e-10 | 61 |
ecto-epithelium | 9.13e-09 | 104 |
brain grey matter | 2.19e-08 | 34 |
gray matter | 2.19e-08 | 34 |
telencephalon | 4.66e-08 | 34 |
cerebral hemisphere | 2.05e-07 | 32 |
regional part of telencephalon | 2.07e-07 | 32 |
organ system subdivision | 9.97e-07 | 223 |