FFCP PHASE1:Hg19::chr1:200008407..200008418,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:200008407..200008418,+
|short_description=p7@NR5A2
|description=CAGE_peak_7_at_NR5A2_5end
|association_with_transcript=-239bp_to_uc009wzh.2_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2494 | |EntrezGene=2494 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=7984 | |HGNC=7984 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-239bp_to_uc009wzh.2_5end | |||
|cluster_id=chr1:200008407..200008418,+ | |||
|description=CAGE_peak_7_at_NR5A2_5end | |||
|id=chr1:200008407..200008418,+ | |||
|ontology_enrichment_celltype=CL:0002322!1.78e-10!5 | |||
|ontology_enrichment_celltype_v019=CL:0000039;6.37e-31;7!CL:0000586;6.37e-31;7!CL:0000182;1.82e-10;12!CL:0002262;6.80e-08;2!CL:1000398;6.80e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,9.01e-31,7;CL:0000586,9.01e-31,7;CL:0000182,1.57e-10,12;CL:0002262,5.74e-08,2;CL:1000398,5.74e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0009117;9.03e-22;10!UBERON:0005564;9.03e-22;10!UBERON:0003099;1.72e-14;1!UBERON:0003852;1.72e-14;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3095;4.66e-10;22!DOID:2994;4.66e-10;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,5.19e-10,22;DOID:2994,5.19e-10,22 | |||
|ontology_enrichment_uberon= | |||
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| ||
|short_description=p7@NR5A2 | |||
}} | }} |
Latest revision as of 15:46, 19 September 2015
Short description: | p7@NR5A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_NR5A2_5end |
Coexpression cluster: | NA |
Association with transcript: | -239bp_to_uc009wzh.2_5end |
EntrezGene: | NR5A2 |
HGNC: | 7984 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 9.01e-31 | 7 |
germ cell | 9.01e-31 | 7 |
hepatocyte | 1.57e-10 | 12 |
endothelial cell of sinusoid | 5.74e-08 | 2 |
endothelial cell of hepatic sinusoid | 5.74e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 5.19e-10 | 22 |
germ cell cancer | 5.19e-10 | 22 |