FFCP PHASE1:Hg19::chr9:100615499..100615519,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2304 | |EntrezGene=2304 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3806 | |HGNC=3806 | ||
|TSSclassifier=strong | |||
|UniProt=O00358 | |UniProt=O00358 | ||
|association_with_transcript=-16bp_to_ENST00000375123_5end | |association_with_transcript=-16bp_to_ENST00000375123_5end | ||
|cluster_id=chr9:100615499..100615519,+ | |||
|coexpression_cluster_id=C30 | |||
|description=CAGE_peak_1_at_FOXE1_5end | |description=CAGE_peak_1_at_FOXE1_5end | ||
|id=chr9:100615499..100615519,+ | |id=chr9:100615499..100615519,+ | ||
|ontology_enrichment_celltype=CL:0000066!2.09e-21!254;CL:0002076!9.83e-15!43;CL:0002368!3.49e-10!13;CL:0000223!2.62e-09!59;CL:0002159!2.73e-08!13;CL:0000076!1.72e-07!62 | |ontology_enrichment_celltype=CL:0000066!2.09e-21!254;CL:0002076!9.83e-15!43;CL:0002368!3.49e-10!13;CL:0000223!2.62e-09!59;CL:0002159!2.73e-08!13;CL:0000076!1.72e-07!62 | ||
|ontology_enrichment_celltype_v019=CL:0002368;1.84e-13;13!CL:0002076;2.13e-13;42!CL:0002202;2.52e-10;9!CL:0002632;2.52e-10;9!CL:0002621;1.18e-07;3!CL:0000307;8.57e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,8.98e-21,253;CL:0002076,8.68e-18,42;CL:0002368,2.16e-13,13;CL:0000223,3.26e-11,58;CL:0002202,3.00e-10,9;CL:0002632,3.00e-10,9;CL:0000076,1.06e-08,63;CL:0002621,1.07e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0008947;3.62e-13;29!UBERON:0007123;5.46e-08;5!UBERON:0006595;2.44e-07;86!CL:0000377;8.57e-07;3 | |||
|ontology_enrichment_disease=DOID:305!1.71e-16!106;DOID:1749!7.15e-16!14;DOID:0050687!1.31e-13!143 | |||
|ontology_enrichment_disease_v019=DOID:1749;9.73e-19;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,9.45e-19,14;DOID:305,6.61e-18,106;DOID:0050687,3.50e-14,143;DOID:14566,1.14e-07,239;DOID:162,4.89e-07,235 | |||
|ontology_enrichment_uberon=UBERON:0001004!1.79e-25!72;UBERON:0000065!1.05e-23!53;UBERON:0000072!8.33e-20!46;UBERON:0004119!8.10e-19!169;UBERON:0000925!8.10e-19!169;UBERON:0006595!8.10e-19!169;UBERON:0008947!1.35e-16!38;UBERON:0003258!1.35e-16!38;UBERON:0001557!5.68e-14!19;UBERON:0001007!1.13e-13!155;UBERON:0001555!1.13e-13!155;UBERON:0007026!1.13e-13!155;UBERON:0001737!1.12e-12!9;UBERON:0003102!7.18e-11!95;UBERON:0000077!1.60e-09!130;UBERON:0005178!2.34e-09!34;UBERON:0002224!2.34e-09!34;UBERON:0000165!3.51e-09!28;UBERON:0000930!3.51e-09!28;UBERON:0005181!6.31e-09!35;UBERON:0000161!2.87e-08!35;UBERON:0001041!3.09e-08!98;UBERON:0000166!3.83e-08!21;UBERON:0007196!6.28e-08!14;UBERON:0001558!6.28e-08!14;UBERON:0000974!1.82e-07!10;UBERON:0000464!3.71e-07!104;UBERON:0004921!5.57e-07!129;UBERON:0004185!5.57e-07!129;UBERON:0003729!5.62e-07!5;UBERON:0003104!7.41e-07!238;UBERON:0009142!7.41e-07!238 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;3.48e-19;9!UBERON:0001557;3.48e-19;9!UBERON:0000072;4.42e-18;37!UBERON:0000065;1.20e-16;44!UBERON:0001004;1.84e-12;65!UBERON:0007196;1.44e-11;15!UBERON:0001558;1.44e-11;15!UBERON:0003729;1.43e-09;13!UBERON:0000974;1.88e-09;6!UBERON:0000344;7.21e-09;20!UBERON:0002046;5.46e-08;5!UBERON:0001949;1.18e-07;3!UBERON:0004807;1.51e-07;22!UBERON:0000486;1.52e-07;12!UBERON:0001723;1.87e-07;3!UBERON:0001033;1.87e-07;3!UBERON:0000165;2.71e-07;28!UBERON:0005181;2.94e-07;35!UBERON:0005178;3.01e-07;34!UBERON:0002224;3.01e-07;34!UBERON:0003126;3.21e-07;7!UBERON:0001005;3.21e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001004,8.09e-27,74;UBERON:0000065,1.36e-26,54;UBERON:0000072,1.73e-25,47;UBERON:0001557,6.79e-20,19;UBERON:0004119,6.84e-20,160;UBERON:0000925,6.84e-20,160;UBERON:0006595,6.84e-20,160;UBERON:0001737,3.25e-19,9;UBERON:0008947,4.56e-19,38;UBERON:0003258,4.56e-19,38;UBERON:0001007,5.45e-16,145;UBERON:0001555,5.45e-16,145;UBERON:0007026,5.45e-16,145;UBERON:0007196,1.41e-11,15;UBERON:0001558,1.41e-11,15;UBERON:0001041,2.46e-11,87;UBERON:0008814,1.38e-10,18;UBERON:0003729,1.43e-09,13;UBERON:0004921,4.24e-09,118;UBERON:0000344,7.68e-09,20;UBERON:0005178,2.83e-08,34;UBERON:0002224,2.83e-08,34;UBERON:0000166,4.07e-08,22;UBERON:0002046,5.57e-08,5;UBERON:0004117,5.57e-08,5;UBERON:0007689,5.57e-08,5;UBERON:0007123,5.57e-08,5;UBERON:0003091,5.57e-08,5;UBERON:0005181,6.04e-08,35;UBERON:0001949,1.07e-07,3;UBERON:0001723,1.76e-07,3;UBERON:0001033,1.76e-07,3;UBERON:0010056,1.76e-07,3;UBERON:0000974,2.75e-07,10;UBERON:0005911,3.16e-07,82;UBERON:0003126,3.47e-07,7;UBERON:0001005,3.47e-07,7;UBERON:0000165,5.88e-07,29;UBERON:0000930,5.88e-07,29;UBERON:0000161,6.02e-07,36;UBERON:0000153,8.55e-07,62;UBERON:0007811,8.55e-07,62 | |||
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| ||
|short_description=p1@FOXE1 | |short_description=p1@FOXE1 | ||
}} | }} |
Latest revision as of 17:55, 19 September 2015
Short description: | p1@FOXE1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FOXE1_5end |
Coexpression cluster: | C30_thyroid_throat_mesothelioma_mucinous_trachea_chorionic_mesenchymal |
Association with transcript: | -16bp_to_ENST00000375123_5end |
EntrezGene: | FOXE1 |
HGNC: | 3806 |
UniProt: | O00358 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 8.98e-21 | 253 |
endo-epithelial cell | 8.68e-18 | 42 |
respiratory epithelial cell | 2.16e-13 | 13 |
endodermal cell | 3.26e-11 | 58 |
epithelial cell of tracheobronchial tree | 3.00e-10 | 9 |
epithelial cell of lower respiratory tract | 3.00e-10 | 9 |
squamous epithelial cell | 1.06e-08 | 63 |
gingival epithelial cell | 1.07e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 9.45e-19 | 14 |
carcinoma | 6.61e-18 | 106 |
cell type cancer | 3.50e-14 | 143 |
disease of cellular proliferation | 1.14e-07 | 239 |
cancer | 4.89e-07 | 235 |