FFCP PHASE1:Hg19::chr18:47376197..47376227,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4645 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7603 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc002ldz.2_5end | |||
|cluster_id=chr18:47376197..47376227,- | |||
|coexpression_cluster_id=C2462 | |||
|description=CAGE_peak_2_at_MYO5B_5end | |||
|id=chr18:47376197..47376227,- | |||
|ontology_enrichment_celltype=CL:0000066!5.91e-60!254;CL:0002076!4.77e-16!43;CL:0000223!2.61e-15!59;CL:0000076!6.33e-13!62;CL:0000220!1.99e-12!246;CL:0002321!2.69e-12!248;CL:0000082!4.23e-09!19;CL:0000077!1.19e-07!19;CL:0002368!2.38e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002076;4.90e-14;42!CL:0000082;7.26e-12;19!CL:0002368;3.38e-10;13!CL:1000507;3.95e-09;10!CL:1000494;3.95e-09;10!CL:0000077;5.77e-09;19!CL:1000497;1.89e-08;17!CL:0002518;1.89e-08;17!CL:0000066;5.92e-08;253!CL:0002202;8.29e-08;9!CL:0002632;8.29e-08;9!CL:0002251;2.14e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.44e-63,253;CL:0002076,5.76e-19,42;CL:0000223,3.14e-16,58;CL:0000076,6.03e-12,63;CL:0000082,7.96e-12,19;CL:0002368,5.66e-10,13;CL:1000507,3.87e-09,10;CL:1000494,3.87e-09,10;CL:0000077,4.37e-09,19;CL:1000497,1.77e-08,17;CL:0002518,1.77e-08,17;CL:0002202,9.83e-08,9;CL:0002632,9.83e-08,9;CL:0002251,2.37e-07,20 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.39e-16;29!CL:0000223;1.10e-08;58!UBERON:0006595;3.89e-08;86!UBERON:0001041;5.80e-07;30 | |||
|ontology_enrichment_disease=DOID:305!1.15e-36!106;DOID:0050687!9.04e-31!143;DOID:162!1.48e-20!235;DOID:14566!3.61e-20!239;DOID:299!8.58e-10!25;DOID:0050615!3.02e-07!16;DOID:1324!4.56e-07!15;DOID:1749!6.60e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:299;2.05e-13;25!DOID:305;5.86e-11;106!DOID:1749;1.45e-09;14!DOID:1324;5.51e-09;15!DOID:0050615;3.33e-08;16!DOID:0050687;3.61e-07;143 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.72e-44,106;DOID:0050687,1.73e-36,143;DOID:162,3.45e-24,235;DOID:14566,5.16e-23,239;DOID:299,1.98e-13,25;DOID:1749,1.25e-09,14;DOID:1324,6.56e-09,15;DOID:0050615,3.90e-08,16 | |||
|ontology_enrichment_uberon=UBERON:0004119!6.70e-22!169;UBERON:0000925!6.70e-22!169;UBERON:0006595!6.70e-22!169;UBERON:0001007!6.82e-19!155;UBERON:0001555!6.82e-19!155;UBERON:0007026!6.82e-19!155;UBERON:0004921!3.17e-17!129;UBERON:0004185!3.17e-17!129;UBERON:0008947!4.27e-15!38;UBERON:0003258!4.27e-15!38;UBERON:0000065!5.14e-15!53;UBERON:0000077!4.10e-14!130;UBERON:0000072!8.49e-14!46;UBERON:0000063!3.50e-13!97;UBERON:0001004!1.01e-12!72;UBERON:0005911!3.51e-12!82;UBERON:0001041!6.97e-12!98;UBERON:0000481!1.60e-11!347;UBERON:0005177!2.51e-11!107;UBERON:0001048!3.35e-11!168;UBERON:0000466!5.13e-10!126;UBERON:0003104!6.28e-10!238;UBERON:0009142!6.28e-10!238;UBERON:0000064!6.31e-10!219;UBERON:0005153!1.03e-09!37;UBERON:0000464!1.37e-09!104;UBERON:0000922!1.37e-09!612;UBERON:0000467!1.37e-09!625;UBERON:0002050!1.53e-09!605;UBERON:0005423!1.53e-09!605;UBERON:0000480!1.88e-09!626;UBERON:0000923!2.69e-09!604;UBERON:0005291!2.69e-09!604;UBERON:0006598!2.69e-09!604;UBERON:0002532!2.69e-09!604;UBERON:0004802!4.23e-09!19;UBERON:0000115!4.23e-09!19;UBERON:0000062!5.46e-09!511;UBERON:0000468!1.06e-08!659;UBERON:0005178!1.43e-08!34;UBERON:0002224!1.43e-08!34;UBERON:0006554!1.44e-08!44;UBERON:0002048!1.66e-08!22;UBERON:0000117!1.66e-08!22;UBERON:0000171!1.66e-08!22;UBERON:0000170!1.66e-08!22;UBERON:0005597!1.66e-08!22;UBERON:0000118!1.66e-08!22;UBERON:0001737!2.81e-08!9;UBERON:0009569!3.00e-08!113;UBERON:0001008!3.95e-08!45;UBERON:0004807!3.98e-08!28;UBERON:0005181!4.72e-08!35;UBERON:0005157!2.48e-07!51;UBERON:0002113!5.40e-07!27;UBERON:0003918!5.40e-07!27;UBERON:0005095!5.40e-07!27;UBERON:0007687!5.40e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0000072;7.73e-17;37!UBERON:0000065;7.52e-15;44!UBERON:0004807;6.15e-14;22!UBERON:0004802;7.26e-12;19!UBERON:0000115;7.26e-12;19!UBERON:0001737;2.67e-11;9!UBERON:0001557;2.67e-11;9!UBERON:0006554;6.69e-11;30!UBERON:0001008;6.69e-11;30!UBERON:0005911;2.34e-10;36!UBERON:0002113;3.53e-10;24!UBERON:0011143;3.53e-10;24!UBERON:0005409;1.16e-09;22!UBERON:0002048;1.44e-09;22!UBERON:0000117;1.44e-09;22!UBERON:0000171;1.44e-09;22!UBERON:0000170;1.44e-09;22!UBERON:0004211;3.95e-09;10!UBERON:0009773;3.95e-09;10!UBERON:0001231;3.95e-09;10!UBERON:0004810;3.95e-09;10!UBERON:0001004;1.13e-08;65!UBERON:0005178;1.81e-08;34!UBERON:0002224;1.81e-08;34!UBERON:0000489;2.07e-08;29!UBERON:0005181;2.73e-08;35!UBERON:0000160;2.03e-07;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,6.04e-21,160;UBERON:0000925,6.04e-21,160;UBERON:0006595,6.04e-21,160;UBERON:0008947,1.89e-19,38;UBERON:0003258,1.89e-19,38;UBERON:0001007,1.12e-18,145;UBERON:0001555,1.12e-18,145;UBERON:0007026,1.12e-18,145;UBERON:0000065,1.38e-16,54;UBERON:0004921,2.48e-16,118;UBERON:0000072,4.57e-16,47;UBERON:0001004,9.49e-14,74;UBERON:0005177,1.31e-13,101;UBERON:0004802,7.96e-12,19;UBERON:0000115,7.96e-12,19;UBERON:0001041,1.37e-11,87;UBERON:0001737,2.56e-11,9;UBERON:0005911,3.73e-10,82;UBERON:0005153,1.26e-09,37;UBERON:0004807,1.32e-09,28;UBERON:0002048,1.56e-09,22;UBERON:0000117,1.56e-09,22;UBERON:0000171,1.56e-09,22;UBERON:0000170,1.56e-09,22;UBERON:0005597,1.56e-09,22;UBERON:0000118,1.56e-09,22;UBERON:0005178,1.67e-09,34;UBERON:0002224,1.67e-09,34;UBERON:0009569,1.84e-09,112;UBERON:0001048,3.53e-09,160;UBERON:0004810,3.87e-09,10;UBERON:0005181,4.74e-09,35;UBERON:0002113,4.75e-09,26;UBERON:0003918,4.75e-09,26;UBERON:0011143,4.75e-09,26;UBERON:0005095,4.75e-09,26;UBERON:0007687,4.75e-09,26;UBERON:0006554,3.66e-08,47;UBERON:0005409,5.38e-08,25;UBERON:0001008,7.59e-08,48;UBERON:0000489,1.40e-07,31;UBERON:0005157,1.42e-07,47;UBERON:0000160,1.73e-07,17 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,3.93174298402414,4.88460817580699,0.436882744260345,0.527533956456907,0.123766352960047,0,0,0,0,0.487932798790507,0.246242116153576,0.612002073732759,0,0,0.821246550437305,0.376627918784408,0,0,0,0,0,0,6.43594857135249,1.50602959389125,4.06729411183466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434539556882471,0,0,2.55244006342983,2.66075276955077,4.74307842742881,0.458426764241994,2.18577172975525,1.85392221392215,0,0,0,0,0,0,0.198762407366705,0.860234595106124,0,0,0,0.275118041940067,0,0.516833518338658,0,0.33472061276467,0.402829317109147,1.52054421143703,0,0.735326160691737,0,0.892997282840798,0.22452937262617,0.225222960966644,1.53316637465883,0.949265659568129,0.183201743930407,0,0,2.61656431285521,0,0.25326102332916,0,0,1.06400514659507,0,1.06748995729705,0.49333509683432,0,0.269421344139376,0.163461903113459,0.454072282934794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0.277064115484183,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0.169560592310488,3.47869535693934,3.54569956768085,2.29443676311203,0,0.132529768321485,0.116193942869518,0.207322110030741,0,0.72995471815166,0,0,0,0,0,11.1208392037453,12.4752670657795,7.71235295627142,12.6838068642253,13.7264049778216,9.72809538355496,12.9438055833758,13.9317240238996,5.77120735419586,0,0,0.8231480226628,0,0,0,0,0,1.96781501668982,1.71567810298526,2.41450627898976,4.49607013030478,3.11639814476056,2.68506490959736,0,0,2.88662684050547,0.115930404975077,1.87853910777315,0.144366447761074,0.462985512576611,0,3.1608175918371,3.43394464837949,0,0,0,4.68669169933885,11.7587489739202,2.26840155587818,11.4634909059646,7.26584846284905,4.21720947081732,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0.22001485746285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,3.69900067373611,0,0,0,0,0,0,0.723906533337896,0,0.179060963239896,0,0,0,0,0.508189248444927,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,1.5156378572313,0,0.30239029332968,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0.725156697549733,1.20303882181971,2.94659164594868,0.34444334449382,0.546273504020151,0,3.15839729035188,3.92778219232515,1.56869953835371,5.84556898613043,4.64427167128653,0,0.510281115829547,0.647747748306418,0,3.79325012561394,1.00337954770971,5.60727800699084,6.64860807142979,5.59686886805446,0,0,0.769350375349168,3.60816110269676,3.25378394664303,0.515205058238611,0.457847324091717,0.247528499761764,1.14853107599234,1.95018073810956,0,7.34697459020127,0.154048617114644,0.767518373630648,0.551346289938122,0,0,0.596586391912706,6.41030656656509,3.63626813794152,2.49847087574638,1.02090169995667,2.2254711788221,0,0,0,0,0.532306030317022,0,0,0.143124886741991,0,0,0,0,0,0,0,0.179872457583315,0.274537029736055,0,0.202182481573316,0,0.842516912477962,0.48763373908959,0,0,0,0.141405431953713,0,0,0.66343897524122,0,0,0,0,0,0.281695602532241,0.143411352204052,0,0.35667105148125,0,0,0,0,0,2.59799704358883,2.68120910214315,1.08890984861323,1.12972560932135,0.86101074534246,1.68471475667626,2.66058092122005,1.37834040124176,0,0,0,0,0,0,0,0,0,0,7.35120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.61421621224659,0,0,0,9.09235669780522,15.2796470232122,0,7.6790175524808,0,0,4.22973079087042,0.16480387422676,0,0.19924798825107,6.3545300572164,0.251932747854276,0.511343412510774,0,0,7.81854654981744,17.0070115941829,0,0,0,0,0,0.0927680981618513,0,0,0,0,1.593108275997,2.03402920234213,0.945550727071745,1.72371686620732,0,0,0,0,0,0,0,0,3.15921544205071,66.086854788058,0.461701551022782,0.91153644677601,0,0,0,2.87101043758728,0.274792780205587,0,0,0,0,0,0,0,0,0,35.6586729052366,5.22344986109273,2.40300221437699,0,5.97157158647103,48.3862877833265,33.6066579713494,0,0,0,0.067401132980677,0,0.234264445725339,0,9.97889556553658,0.242780379534093,0,3.62972148145992,0.61214552326098,0,29.0124199469971,2.69589297632843,1.99396161812156,0,0,0,3.69992409838731,6.65638430463066,10.2400245617727,8.52533857505085,5.39767080798496,0.17472666824203,0,12.5783230675811,11.3288441483588,13.1384731285135,0.193978032976839,0,0,3.15196426687527,0.596143835108969,0,5.47543871657448,1.04206466326994,11.9533677054037,3.19695375331408,3.02589876023623,0,0,4.32164393964449,4.72159635148644,16.4985824231757,17.1239299652754,18.6193066435953,0.713987523454252,0.288950589901519,0,0,0,1.71906176567983,0,0,0,0,0.399358000997982,0,0,0,0.360299883542404,2.32991899054908,0.315132729228895,0.247247575143499,0.13480708770837,3.8386717790752,0,0,0,0.160753148465019,0.275078873194468,0.415440338029185,0,0,0,5.03152031398899,2.83700546277113,1.46872846777995,7.28642321983905,2.51002275065983,5.56554072226391,0,0,1.27134268827375,0,0,0,5.98650957812437,0,0.170388021785422,0.453248366080503,0,0,0,0.39669780522807,11.4628181382501,2.81926008926669,0.320362237703084,0.471612915298998,0,0,0,0,2.55336503108073,0,0,0,0,0.628216385000937,0,0,0,0,0.110929051536852,0,0.138348634936231,3.12451019905266,0,0,0.705797459094515,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0.621051827505038,0.414706207840855,0,0,0,0.380805212168795,0.813741466409323,0,0.537052785212442,0,0,6.40044423461046,0,0,0,3.46715694733146,13.9387034393702,0.521988583930423,1.36023555307363,6.25110680674352,2.69210374957114,6.08902059677057,10.1904477563121,3.0699766941019,3.7104720648635,2.50788249752189,1.68942440653073,9.73717770634198,1.72715170865599,1.82315973706429,0,0,0,0,0.655219697692825,0,15.848409251897,0,0,0.172214979660816,3.97261167496785,0.736423801007363,7.41361390913056,1.24415452006595,0,1.29389773676018,0,0,0,0,0,0,0,0,8.80627823114017,0,0.918736432059601,0.0642292250964595,0,0,0,0,0,0,0,4.80923820655025,1.06172751012966,1.46742878817343,2.54156465530744,0.381382095467167,1.3807198521202,0,0.376051641746286,1.0085253435176,0,0,1.96526301012116,15.9684573114409,0,0,0,0,0,0,0,0.175871244359621,1.66091155931474,0.535701835878287,0.336283722218824,1.21393120847326,0.455324382702595,0.354809480650555,0,3.25827217931095,0,0.0657727735628491,3.42762138563508,1.22354542081276,0,0,24.1034060449859,7.30526976407596,13.8193658379918,21.4988259549173,0,1.58013611732727,0,0.695433089210318,0,0,0.17071847709395,0.691259661814092,0,0.709992004383392,0.681707238073262,0,5.4985648450572,0.93061915699296,2.8666168169323,1.4541206133713,9.52057266067857,21.4575547968794,0,0.205325613712494,0,0,3.74303141539369,0,0,12.6499611883635,0,51.327366812669,63.5143321228385,7.86814417814246,5.17349025997675,0.245148321753905,6.83461986594715,0.196308467114945,0,0,0,0,0.0644578879735772,0,1.96409332466223,2.82315897372553,4.65399926797176,3.65168194123259,0,0,0,0,0,2.645134202577,0,0,0,0.252332849670158,0.218531143927391,0.253397002022874,2.34574308406558,0.801652215796681,4.77853477581194,0.250707539292375,0.0757786982182394,0.267964130156178,0,0,0.426467963801962,0.23806443146374,0.0645889098360061,0.124149428591716,1.23345048838675,0.190941474834495,0,3.70118471424834,0.342233301085281,0.740872583160463,3.37094365345579,2.32862249582209,1.46525883499754,1.3874554964103,0,16.1685363791856,4.69281884806909,0.122241444182866,1.62758471326295,0,0.201273793591026,0 | |||
|short_description=p2@MYO5B | |||
}} |
Latest revision as of 18:05, 19 September 2015
Short description: | p2@MYO5B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MYO5B_5end |
Coexpression cluster: | C2462_cervical_small_colon_clear_embryonic_renal_mucinous |
Association with transcript: | 0bp_to_uc002ldz.2_5end |
EntrezGene: | MYO5B |
HGNC: | 7603 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.44e-63 | 253 |
endo-epithelial cell | 5.76e-19 | 42 |
endodermal cell | 3.14e-16 | 58 |
squamous epithelial cell | 6.03e-12 | 63 |
epithelial cell of lung | 7.96e-12 | 19 |
respiratory epithelial cell | 5.66e-10 | 13 |
kidney tubule cell | 3.87e-09 | 10 |
nephron tubule epithelial cell | 3.87e-09 | 10 |
mesothelial cell | 4.37e-09 | 19 |
kidney cell | 1.77e-08 | 17 |
kidney epithelial cell | 1.77e-08 | 17 |
epithelial cell of tracheobronchial tree | 9.83e-08 | 9 |
epithelial cell of lower respiratory tract | 9.83e-08 | 9 |
epithelial cell of alimentary canal | 2.37e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.72e-44 | 106 |
cell type cancer | 1.73e-36 | 143 |
cancer | 3.45e-24 | 235 |
disease of cellular proliferation | 5.16e-23 | 239 |
adenocarcinoma | 1.98e-13 | 25 |
squamous cell carcinoma | 1.25e-09 | 14 |
lung cancer | 6.56e-09 | 15 |
respiratory system cancer | 3.90e-08 | 16 |