FFCP PHASE1:Hg19::chr18:47721315..47721430,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr18:47721315..47721430,-
|short_description=p1@MYO5B
|description=CAGE_peak_1_at_MYO5B_5end
|association_with_transcript=20bp_to_ENST00000285039,NM_001080467,...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4645 | |EntrezGene=4645 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7603 | |HGNC=7603 | ||
|TSSclassifier=strong | |||
|UniProt=Q9ULV0,Q7Z7A5,Q9H6Y6 | |UniProt=Q9ULV0,Q7Z7A5,Q9H6Y6 | ||
|association_with_transcript=20bp_to_ENST00000285039,NM_001080467,uc002leb.2_5end | |||
|cluster_id=chr18:47721315..47721430,- | |||
|description=CAGE_peak_1_at_MYO5B_5end | |||
|id=chr18:47721315..47721430,- | |||
|ontology_enrichment_celltype=CL:0000066!2.29e-24!254;CL:0000223!2.02e-15!59;CL:0002076!9.20e-14!43;CL:0002368!3.90e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002076;6.10e-13;42!CL:0002251;8.83e-09;20!CL:0002368;1.17e-08;13!CL:0000082;9.63e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.34e-27,253;CL:0000223,1.07e-19,58;CL:0002076,2.01e-17,42;CL:0002251,9.35e-09,20;CL:0002368,1.10e-08,13;CL:0000082,9.78e-08,19 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.80e-13;29!UBERON:0006595;1.60e-11;86!UBERON:0001041;1.69e-11;30!CL:0000223;2.98e-11;58 | |||
|ontology_enrichment_disease=DOID:305!6.52e-20!106;DOID:0050687!4.04e-12!143;DOID:299!1.61e-08!25 | |||
|ontology_enrichment_disease_v019=DOID:299;7.35e-10;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,7.28e-21,106;DOID:0050687,2.45e-13,143;DOID:299,6.57e-10,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!4.87e-27!169;UBERON:0000925!4.87e-27!169;UBERON:0006595!4.87e-27!169;UBERON:0004921!1.63e-23!129;UBERON:0004185!1.63e-23!129;UBERON:0001007!3.99e-23!155;UBERON:0001555!3.99e-23!155;UBERON:0007026!3.99e-23!155;UBERON:0000077!5.88e-21!130;UBERON:0000062!4.08e-17!511;UBERON:0001041!4.61e-16!98;UBERON:0001004!2.39e-15!72;UBERON:0000466!1.78e-14!126;UBERON:0000064!2.61e-14!219;UBERON:0005911!6.88e-14!82;UBERON:0000065!5.59e-13!53;UBERON:0000464!5.11e-12!104;UBERON:0008947!1.11e-11!38;UBERON:0003258!1.11e-11!38;UBERON:0007023!1.15e-11!115;UBERON:0000481!2.32e-11!347;UBERON:0005177!7.70e-11!107;UBERON:0005153!7.05e-10!37;UBERON:0000072!1.18e-09!46;UBERON:0002530!2.52e-09!59;UBERON:0000922!3.13e-09!612;UBERON:0005157!7.62e-09!51;UBERON:0001048!8.67e-09!168;UBERON:0009569!1.81e-08!113;UBERON:0000468!3.58e-08!659;UBERON:0000480!4.12e-08!626;UBERON:0005181!4.73e-08!35;UBERON:0000467!6.16e-08!625;UBERON:0005178!7.79e-08!34;UBERON:0002224!7.79e-08!34;UBERON:0002050!9.79e-08!605;UBERON:0005423!9.79e-08!605;UBERON:0002048!1.41e-07!22;UBERON:0000117!1.41e-07!22;UBERON:0000171!1.41e-07!22;UBERON:0000170!1.41e-07!22;UBERON:0005597!1.41e-07!22;UBERON:0000118!1.41e-07!22;UBERON:0000923!1.78e-07!604;UBERON:0005291!1.78e-07!604;UBERON:0006598!1.78e-07!604;UBERON:0002532!1.78e-07!604;UBERON:0000063!1.87e-07!97;UBERON:0003929!2.37e-07!54;UBERON:0003104!4.71e-07!238;UBERON:0009142!4.71e-07!238;UBERON:0000058!5.54e-07!26;UBERON:0001008!8.63e-07!45;UBERON:0005156!1.00e-06!59;UBERON:0000990!1.00e-06!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;4.05e-14;33!UBERON:0000065;3.34e-12;44!UBERON:0001004;1.99e-10;65!UBERON:0005409;6.56e-10;22!UBERON:0000072;7.34e-10;37!UBERON:0002048;8.73e-10;22!UBERON:0000117;8.73e-10;22!UBERON:0000171;8.73e-10;22!UBERON:0000170;8.73e-10;22!UBERON:0004807;9.64e-10;22!UBERON:0005178;2.09e-09;34!UBERON:0002224;2.09e-09;34!UBERON:0005181;4.22e-09;35!UBERON:0002365;3.18e-08;31!UBERON:0002330;3.18e-08;31!UBERON:0000160;4.11e-08;17!UBERON:0001041;6.33e-08;14!UBERON:0004802;9.63e-08;19!UBERON:0000115;9.63e-08;19!UBERON:0001555;1.82e-07;54!UBERON:0000058;4.26e-07;10!UBERON:0001007;4.87e-07;81!UBERON:0005911;4.96e-07;36!UBERON:0005177;6.13e-07;99 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,3.29e-34,160;UBERON:0000925,3.29e-34,160;UBERON:0006595,3.29e-34,160;UBERON:0004921,1.90e-32,118;UBERON:0001007,1.01e-30,145;UBERON:0001555,1.01e-30,145;UBERON:0007026,1.01e-30,145;UBERON:0001041,2.50e-24,87;UBERON:0001004,5.74e-20,74;UBERON:0005177,2.61e-17,101;UBERON:0000065,4.17e-17,54;UBERON:0005911,8.15e-16,82;UBERON:0008947,2.46e-15,38;UBERON:0003258,2.46e-15,38;UBERON:0011216,1.26e-14,223;UBERON:0009569,8.63e-14,112;UBERON:0000072,8.68e-13,47;UBERON:0005153,3.22e-11,37;UBERON:0005181,5.22e-11,35;UBERON:0005178,9.91e-11,34;UBERON:0002224,9.91e-11,34;UBERON:0002530,3.67e-10,59;UBERON:0001048,4.90e-10,160;UBERON:0002048,9.21e-10,22;UBERON:0000117,9.21e-10,22;UBERON:0000171,9.21e-10,22;UBERON:0000170,9.21e-10,22;UBERON:0005597,9.21e-10,22;UBERON:0000118,9.21e-10,22;UBERON:0001008,7.14e-09,48;UBERON:0005157,1.44e-08,47;UBERON:0006554,1.74e-08,47;UBERON:0002365,2.02e-08,31;UBERON:0002330,2.02e-08,31;UBERON:0003929,2.32e-08,54;UBERON:0000915,2.85e-08,52;UBERON:0005172,3.03e-08,54;UBERON:0005173,3.03e-08,54;UBERON:0005631,3.22e-08,14;UBERON:0000158,3.22e-08,14;UBERON:0005409,4.01e-08,25;UBERON:0000160,4.17e-08,17;UBERON:0004807,5.54e-08,28;UBERON:0004802,9.78e-08,19;UBERON:0000115,9.78e-08,19;UBERON:0005156,1.15e-07,59;UBERON:0000990,1.15e-07,59;UBERON:0000922,1.51e-07,592;UBERON:0003133,1.95e-07,48;UBERON:0009856,3.86e-07,26;UBERON:0004175,5.15e-07,25;UBERON:0003100,7.19e-07,41 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,6.63481628554074,12.5604210235037,10.4851858622483,6.33040747748289,0,0,0,0,0,0,0.123121058076788,0,0.313454721478088,0.286235987131057,0,0.125542639594803,2.13957536094264,1.80621296789881,1.73163718890094,0,0,0.928896739896456,5.51652734687356,1.50602959389125,6.65557218300218,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0.56738522469114,0,0,0,0.434377689410233,0.605399502633369,0,0.316462387440884,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,1.28019066769952,0.800791974072025,0,0,0.954053754535364,0,0,0.382273228125229,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0.795285947051099,0,0,0,0.087834785693126,8.90657713384446,3.64295288292542,9.64039551239516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.36094052142534,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0.10075209822764,0,12.7552163087776,13.0918137883601,8.89094245705912,0.609868530647977,1.72288698817931,1.04574548582567,2.798848485415,2.27088765788066,0.72995471815166,0,0,0,0,0,5.20549920175313,6.23763353288976,2.6511213287183,4.19117096383097,6.972142210957,4.27087114399974,4.85392709376592,4.12065076763227,1.92373578473195,0,0,0,0,20.2808055714929,17.6908899001973,22.4500164538934,0,9.1011444521904,0.171567810298526,4.39001141634502,3.37205259772859,0.402115889646523,2.59247646443883,0,0,0,1.15930404975077,0.117408694235822,0,0,0,9.4824527755113,1.71697232418975,0,0,0,6.56136837907439,12.9346238713122,11.0584575849061,7.88114999785065,5.81267877027924,6.51750554580859,0,0,0.829312462163088,0.576479813667846,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.2777263612176,5.22920075160176,21.7941120776884,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.670065061337395,0.637938751653163,0,0,0,0.12269149171914,0,0,0.207970861530807,0,0,0.117141414992713,0.300946099727719,0,0,0,0.184369168541703,0,0,0,0,0,0,9.39695471483404,8.32177197552485,3.0239029332968,0,0,0,0,0,0,0,0,0,0,0,0,4.95523743325651,4.61164881697555,31.3996172271406,0,0.182091168006717,0.262248829918848,10.8287907097779,17.7905428711198,5.49044838423799,5.84556898613043,10.1329563737161,0,0,0.215915916102139,0,0,4.01351819083883,14.5279475635672,22.4390522410756,1.11937377361089,0,0,0,0.656029291399411,0.325378394664303,11.8497163394881,0,0,1.14853107599234,0.650060246036521,0,0,0,0,0,0,0,0,0,7.43782119124401,8.64855303142978,7.01869918720213,16.5898760603102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0,0,2.59799704358883,4.69211592875051,8.71127878890581,13.650851112633,0.86101074534246,1.68471475667626,0.886860307073351,4.36474460393223,0,0,0,0.238231775457789,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,46.2237134808303,0,0,22.7344503926056,5.96685908293468,57.5374208217833,22.8662804241132,70.3398007807241,0.994147647766298,0.703347082052564,0.111308705022906,0,0,3.78571177677032,15.7481831852754,10.3292426620253,22.8059161979805,0.861593638227486,0,13.3903843209517,13.0685457513195,0,2.95930216910801,0,0,0.969332746095218,0.463840490809256,1.99613798001194,8.33368835472746,75.3905199967207,2.17499872630438,0.910347586283997,10.4243996620034,11.8193840883968,0,0,0.173624994933292,0,0,0,0,0.295547618953547,0.87754158861589,0,15.7548831034822,7.61807559187591,3.76008784295104,2.99733075704478,3.94933635402997,13.254979374485,17.2260626255237,4.67147726349498,7.99552164027952,0,0,0,0,0,0,0,0,14.7698645169619,9.79396848954886,10.4601272861116,5.62610463329437,41.8010011052972,36.0906863173624,39.7169594206857,0.889563386041866,0.86494757262552,0.417687798021821,0.606610196826093,1.60515529459758,0,0,5.6742739490306,0,20.1238045453189,16.9387002468129,0.61214552326098,1.32691817219825,2.55549813004637,1.45163467956146,0,0,0,0,2.27687636823834,0.277349346026277,27.2488789186156,13.6209432405985,7.22591414617341,13.9781334593624,0,0,0.219267951258557,0.164230914106418,18.9128582152418,0.176512253383001,12.2029600021488,1.78154502040776,0,0.379864775735272,3.91102765469606,14.9896993870368,17.0762395791482,6.79352672579243,4.7549837660855,0,0,0,0,16.7342764577925,0,0,0,0,0.600420288709789,0,0,0.429765441419957,0,0.279282401272254,0.458320848023367,0.717873024576814,6.38972801596772,0.858452096273142,0.669514372325618,0.0671834724867263,0,6.98975697164723,6.93292004303568,7.25259553754265,7.81881108708545,0,0,0,0.681017030557878,0.482259445395058,0.550157746388935,0,6.74921674654501,23.2140586367385,0.789744236554321,3.35434687599266,23.3264893605627,13.7955566795045,3.69601177817923,1.79287339332845,12.4744878257639,0,0,0,0,0,0,0,0,0,0,17.732820275048,15.9008266694666,0,0,1.36869470307464,28.1926008926669,16.7656237731281,6.28817220398664,15.7410841031934,0,1.18566979138767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| ||
|short_description=p1@MYO5B | |||
}} | }} |
Latest revision as of 18:07, 19 September 2015
Short description: | p1@MYO5B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MYO5B_5end |
Coexpression cluster: | NA |
Association with transcript: | 20bp_to_ENST00000285039, NM_001080467, uc002leb.2_5end |
EntrezGene: | MYO5B |
HGNC: | 7603 |
UniProt: | Q9ULV0Q7Z7A5Q9H6Y6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.34e-27 | 253 |
endodermal cell | 1.07e-19 | 58 |
endo-epithelial cell | 2.01e-17 | 42 |
epithelial cell of alimentary canal | 9.35e-09 | 20 |
respiratory epithelial cell | 1.10e-08 | 13 |
epithelial cell of lung | 9.78e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 7.28e-21 | 106 |
cell type cancer | 2.45e-13 | 143 |
adenocarcinoma | 6.57e-10 | 25 |