FFCP PHASE1:Hg19::chr18:47721447..47721474,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4645 | |EntrezGene=4645 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7603 | |HGNC=7603 | ||
|TSSclassifier=strong | |||
|UniProt=Q9ULV0,Q7Z7A5,Q9H6Y6 | |UniProt=Q9ULV0,Q7Z7A5,Q9H6Y6 | ||
|association_with_transcript=0bp_to_ENST00000285039,NM_001080467,uc002leb.2_5end | |association_with_transcript=0bp_to_ENST00000285039,NM_001080467,uc002leb.2_5end | ||
|cluster_id=chr18:47721447..47721474,- | |||
|description=CAGE_peak_4_at_MYO5B_5end | |description=CAGE_peak_4_at_MYO5B_5end | ||
|id=chr18:47721447..47721474,- | |id=chr18:47721447..47721474,- | ||
|ontology_enrichment_celltype=CL:0000066!1.37e-29!254;CL:0000223!4.13e-16!59;CL:0002076!7.15e-16!43;CL:0002368!1.33e-08!13;CL:0000082!4.69e-08!19;CL:0002251!1.03e-07!21 | |ontology_enrichment_celltype=CL:0000066!1.37e-29!254;CL:0000223!4.13e-16!59;CL:0002076!7.15e-16!43;CL:0002368!1.33e-08!13;CL:0000082!4.69e-08!19;CL:0002251!1.03e-07!21 | ||
|ontology_enrichment_celltype_v019=CL:0002076;3.80e-11;42!CL:0002368;3.04e-10;13!CL:0000082;1.11e-07;19!CL:0002251;3.49e-07;20!CL:0002202;4.91e-07;9!CL:0002632;4.91e-07;9 | |ontology_enrichment_celltype_v019=CL:0002076;3.80e-11;42!CL:0002368;3.04e-10;13!CL:0000082;1.11e-07;19!CL:0002251;3.49e-07;20!CL:0002202;4.91e-07;9!CL:0002632;4.91e-07;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.15e-30,253;CL:0000223,1.11e-17,58;CL:0002076,3.53e-16,42;CL:0002368,4.63e-10,13;CL:0000082,1.84e-07,19;CL:0002251,3.02e-07,20;CL:0002202,8.53e-07,9;CL:0002632,8.53e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.94e-12;29!UBERON:0001041;2.19e-11;30!CL:0000223;8.09e-10;58!UBERON:0006595;6.35e-09;86!UBERON:0009497;8.42e-07;13 | |ontology_enrichment_development_v019=UBERON:0008947;2.94e-12;29!UBERON:0001041;2.19e-11;30!CL:0000223;8.09e-10;58!UBERON:0006595;6.35e-09;86!UBERON:0009497;8.42e-07;13 | ||
|ontology_enrichment_disease=DOID:305!1.16e-29!106;DOID:0050687!2.11e-21!143;DOID:162!7.84e-11!235;DOID:14566!6.32e-10!239;DOID:299!1.83e-08!25;DOID:0050615!8.68e-07!16 | |ontology_enrichment_disease=DOID:305!1.16e-29!106;DOID:0050687!2.11e-21!143;DOID:162!7.84e-11!235;DOID:14566!6.32e-10!239;DOID:299!1.83e-08!25;DOID:0050615!8.68e-07!16 | ||
|ontology_enrichment_disease_v019=DOID:299;7.03e-09;25!DOID:305;4.20e-08;106!DOID:0050615;5.62e-07;16 | |ontology_enrichment_disease_v019=DOID:299;7.03e-09;25!DOID:305;4.20e-08;106!DOID:0050615;5.62e-07;16 | ||
|ontology_enrichment_disease_v019_2=DOID:305,9.57e-27,106;DOID:0050687,4.26e-19,143;DOID:162,3.02e-09,235;DOID:299,6.61e-09,25;DOID:14566,1.24e-08,239;DOID:0050615,9.73e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0004119!5.18e-24!169;UBERON:0000925!5.18e-24!169;UBERON:0006595!5.18e-24!169;UBERON:0004921!1.39e-21!129;UBERON:0004185!1.39e-21!129;UBERON:0000077!3.22e-21!130;UBERON:0001007!4.40e-21!155;UBERON:0001555!4.40e-21!155;UBERON:0007026!4.40e-21!155;UBERON:0001004!4.04e-18!72;UBERON:0001041!7.26e-17!98;UBERON:0000466!5.84e-16!126;UBERON:0000062!3.53e-15!511;UBERON:0000065!5.29e-15!53;UBERON:0000464!2.07e-14!104;UBERON:0008947!4.65e-14!38;UBERON:0003258!4.65e-14!38;UBERON:0000064!3.56e-12!219;UBERON:0001048!7.41e-12!168;UBERON:0000072!9.97e-12!46;UBERON:0005911!1.14e-11!82;UBERON:0005153!3.56e-11!37;UBERON:0005177!5.52e-11!107;UBERON:0005157!1.88e-10!51;UBERON:0000481!2.31e-10!347;UBERON:0005181!2.37e-09!35;UBERON:0002048!3.17e-09!22;UBERON:0000117!3.17e-09!22;UBERON:0000171!3.17e-09!22;UBERON:0000170!3.17e-09!22;UBERON:0005597!3.17e-09!22;UBERON:0000118!3.17e-09!22;UBERON:0005156!3.81e-09!59;UBERON:0000990!3.81e-09!59;UBERON:0005178!4.09e-09!34;UBERON:0002224!4.09e-09!34;UBERON:0009569!1.27e-08!113;UBERON:0003133!1.82e-08!48;UBERON:0000922!3.21e-08!612;UBERON:0004802!4.69e-08!19;UBERON:0000115!4.69e-08!19;UBERON:0000063!4.74e-08!97;UBERON:0002530!1.00e-07!59;UBERON:0004807!2.19e-07!28;UBERON:0000468!2.20e-07!659;UBERON:0003104!3.15e-07!238;UBERON:0009142!3.15e-07!238;UBERON:0007023!3.78e-07!115;UBERON:0002553!4.50e-07!70;UBERON:0000480!5.76e-07!626;UBERON:0000467!8.00e-07!625;UBERON:0003100!9.59e-07!41 | |ontology_enrichment_uberon=UBERON:0004119!5.18e-24!169;UBERON:0000925!5.18e-24!169;UBERON:0006595!5.18e-24!169;UBERON:0004921!1.39e-21!129;UBERON:0004185!1.39e-21!129;UBERON:0000077!3.22e-21!130;UBERON:0001007!4.40e-21!155;UBERON:0001555!4.40e-21!155;UBERON:0007026!4.40e-21!155;UBERON:0001004!4.04e-18!72;UBERON:0001041!7.26e-17!98;UBERON:0000466!5.84e-16!126;UBERON:0000062!3.53e-15!511;UBERON:0000065!5.29e-15!53;UBERON:0000464!2.07e-14!104;UBERON:0008947!4.65e-14!38;UBERON:0003258!4.65e-14!38;UBERON:0000064!3.56e-12!219;UBERON:0001048!7.41e-12!168;UBERON:0000072!9.97e-12!46;UBERON:0005911!1.14e-11!82;UBERON:0005153!3.56e-11!37;UBERON:0005177!5.52e-11!107;UBERON:0005157!1.88e-10!51;UBERON:0000481!2.31e-10!347;UBERON:0005181!2.37e-09!35;UBERON:0002048!3.17e-09!22;UBERON:0000117!3.17e-09!22;UBERON:0000171!3.17e-09!22;UBERON:0000170!3.17e-09!22;UBERON:0005597!3.17e-09!22;UBERON:0000118!3.17e-09!22;UBERON:0005156!3.81e-09!59;UBERON:0000990!3.81e-09!59;UBERON:0005178!4.09e-09!34;UBERON:0002224!4.09e-09!34;UBERON:0009569!1.27e-08!113;UBERON:0003133!1.82e-08!48;UBERON:0000922!3.21e-08!612;UBERON:0004802!4.69e-08!19;UBERON:0000115!4.69e-08!19;UBERON:0000063!4.74e-08!97;UBERON:0002530!1.00e-07!59;UBERON:0004807!2.19e-07!28;UBERON:0000468!2.20e-07!659;UBERON:0003104!3.15e-07!238;UBERON:0009142!3.15e-07!238;UBERON:0007023!3.78e-07!115;UBERON:0002553!4.50e-07!70;UBERON:0000480!5.76e-07!626;UBERON:0000467!8.00e-07!625;UBERON:0003100!9.59e-07!41 | ||
|ontology_enrichment_uberon_v019=UBERON:0000065;1.05e-11;44!UBERON:0000072;3.03e-10;37!UBERON:0004807;1.50e-09;22!UBERON:0001004;2.14e-09;65!UBERON:0002048;1.92e-08;22!UBERON:0000117;1.92e-08;22!UBERON:0000171;1.92e-08;22!UBERON:0000170;1.92e-08;22!UBERON:0000058;2.10e-08;10!UBERON:0005178;6.95e-08;34!UBERON:0002224;6.95e-08;34!UBERON:0004802;1.11e-07;19!UBERON:0000115;1.11e-07;19!UBERON:0005181;1.58e-07;35!UBERON:0002294;4.90e-07;7!UBERON:0001173;4.90e-07;7!UBERON:0005911;7.51e-07;36 | |ontology_enrichment_uberon_v019=UBERON:0000065;1.05e-11;44!UBERON:0000072;3.03e-10;37!UBERON:0004807;1.50e-09;22!UBERON:0001004;2.14e-09;65!UBERON:0002048;1.92e-08;22!UBERON:0000117;1.92e-08;22!UBERON:0000171;1.92e-08;22!UBERON:0000170;1.92e-08;22!UBERON:0000058;2.10e-08;10!UBERON:0005178;6.95e-08;34!UBERON:0002224;6.95e-08;34!UBERON:0004802;1.11e-07;19!UBERON:0000115;1.11e-07;19!UBERON:0005181;1.58e-07;35!UBERON:0002294;4.90e-07;7!UBERON:0001173;4.90e-07;7!UBERON:0005911;7.51e-07;36 | ||
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| ||
|short_description=p4@MYO5B | |short_description=p4@MYO5B | ||
}} | }} |
Latest revision as of 18:11, 19 September 2015
Short description: | p4@MYO5B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MYO5B_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000285039, NM_001080467, uc002leb.2_5end |
EntrezGene: | MYO5B |
HGNC: | 7603 |
UniProt: | Q9ULV0Q7Z7A5Q9H6Y6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.15e-30 | 253 |
endodermal cell | 1.11e-17 | 58 |
endo-epithelial cell | 3.53e-16 | 42 |
respiratory epithelial cell | 4.63e-10 | 13 |
epithelial cell of lung | 1.84e-07 | 19 |
epithelial cell of alimentary canal | 3.02e-07 | 20 |
epithelial cell of tracheobronchial tree | 8.53e-07 | 9 |
epithelial cell of lower respiratory tract | 8.53e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 9.57e-27 | 106 |
cell type cancer | 4.26e-19 | 143 |
cancer | 3.02e-09 | 235 |
adenocarcinoma | 6.61e-09 | 25 |
disease of cellular proliferation | 1.24e-08 | 239 |
respiratory system cancer | 9.73e-07 | 16 |