FFCP PHASE1:Hg19::chr11:67980744..67980799,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51111 | |EntrezGene=51111 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24283 | |HGNC=24283 | ||
|TSSclassifier=strong | |||
|UniProt=C9J6S5,Q4FZB7 | |UniProt=C9J6S5,Q4FZB7 | ||
|association_with_transcript=0bp_to_ENST00000401547,ENST00000453170,NM_016028,NM_017635,uc001onm.1,uc001onn.1,uc001ono.1_5end | |association_with_transcript=0bp_to_ENST00000401547,ENST00000453170,NM_016028,NM_017635,uc001onm.1,uc001onn.1,uc001ono.1_5end | ||
|cluster_id=chr11:67980744..67980799,- | |||
|description=CAGE_peak_2_at_SUV420H1_5end | |description=CAGE_peak_2_at_SUV420H1_5end | ||
|id=chr11:67980744..67980799,- | |id=chr11:67980744..67980799,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.87e-07;82 | |||
|ontology_enrichment_disease=DOID:0050687!3.71e-09!143 | |ontology_enrichment_disease=DOID:0050687!3.71e-09!143 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,3.69e-09,143 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.64e-26!115;UBERON:0001017!8.17e-14!82;UBERON:0000073!8.88e-14!94;UBERON:0001016!8.88e-14!94;UBERON:0001049!2.08e-13!57;UBERON:0005068!2.08e-13!57;UBERON:0006241!2.08e-13!57;UBERON:0007135!2.08e-13!57;UBERON:0005743!1.55e-12!86;UBERON:0003080!6.91e-12!42;UBERON:0002780!7.07e-12!41;UBERON:0001890!7.07e-12!41;UBERON:0006240!7.07e-12!41;UBERON:0000955!1.58e-10!69;UBERON:0006238!1.58e-10!69;UBERON:0002020!1.46e-09!34;UBERON:0003528!1.46e-09!34;UBERON:0002616!1.48e-09!59;UBERON:0001893!2.28e-09!34;UBERON:0002791!3.44e-09!33;UBERON:0001869!5.73e-09!32;UBERON:0002346!2.40e-08!90;UBERON:0002619!1.38e-07!22;UBERON:0000924!1.61e-07!173;UBERON:0006601!1.61e-07!173;UBERON:0003075!1.65e-07!86;UBERON:0007284!1.65e-07!86;UBERON:0000956!1.92e-07!25;UBERON:0000203!1.92e-07!25;UBERON:0001950!3.93e-07!20;UBERON:0004121!7.70e-07!169 | |ontology_enrichment_uberon=UBERON:0007023!2.64e-26!115;UBERON:0001017!8.17e-14!82;UBERON:0000073!8.88e-14!94;UBERON:0001016!8.88e-14!94;UBERON:0001049!2.08e-13!57;UBERON:0005068!2.08e-13!57;UBERON:0006241!2.08e-13!57;UBERON:0007135!2.08e-13!57;UBERON:0005743!1.55e-12!86;UBERON:0003080!6.91e-12!42;UBERON:0002780!7.07e-12!41;UBERON:0001890!7.07e-12!41;UBERON:0006240!7.07e-12!41;UBERON:0000955!1.58e-10!69;UBERON:0006238!1.58e-10!69;UBERON:0002020!1.46e-09!34;UBERON:0003528!1.46e-09!34;UBERON:0002616!1.48e-09!59;UBERON:0001893!2.28e-09!34;UBERON:0002791!3.44e-09!33;UBERON:0001869!5.73e-09!32;UBERON:0002346!2.40e-08!90;UBERON:0002619!1.38e-07!22;UBERON:0000924!1.61e-07!173;UBERON:0006601!1.61e-07!173;UBERON:0003075!1.65e-07!86;UBERON:0007284!1.65e-07!86;UBERON:0000956!1.92e-07!25;UBERON:0000203!1.92e-07!25;UBERON:0001950!3.93e-07!20;UBERON:0004121!7.70e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;7.18e-09;41!UBERON:0001890;7.18e-09;41!UBERON:0000922;2.21e-08;49!UBERON:0002791;2.71e-08;32!UBERON:0003528;3.11e-08;34!UBERON:0002020;3.11e-08;34!UBERON:0001869;3.31e-08;32!UBERON:0001893;4.84e-08;34!UBERON:0007023;8.97e-08;114!UBERON:0000073;1.17e-07;53!UBERON:0002616;1.17e-07;53!UBERON:0002619;1.91e-07;22!UBERON:0000956;2.06e-07;25!UBERON:0000203;2.06e-07;25!UBERON:0001950;5.09e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.02e-26,114;UBERON:0001016,5.38e-15,89;UBERON:0001017,9.32e-14,81;UBERON:0001049,2.23e-13,56;UBERON:0005068,2.23e-13,56;UBERON:0006241,2.23e-13,56;UBERON:0007135,2.23e-13,56;UBERON:0000073,4.82e-12,53;UBERON:0002616,4.82e-12,53;UBERON:0002780,7.04e-12,41;UBERON:0001890,7.04e-12,41;UBERON:0003080,7.04e-12,41;UBERON:0006240,7.04e-12,41;UBERON:0000955,1.81e-10,68;UBERON:0006238,1.81e-10,68;UBERON:0011216,5.23e-10,223;UBERON:0003528,1.46e-09,34;UBERON:0002020,1.46e-09,34;UBERON:0001893,2.27e-09,34;UBERON:0002791,5.46e-09,32;UBERON:0001869,5.71e-09,32;UBERON:0002346,3.39e-08,86;UBERON:0002619,1.37e-07,22;UBERON:0000956,1.91e-07,25;UBERON:0000203,1.91e-07,25;UBERON:0003075,2.35e-07,82;UBERON:0007284,2.35e-07,82;UBERON:0001950,3.92e-07,20;UBERON:0004121,6.53e-07,171;UBERON:0000924,6.53e-07,171;UBERON:0006601,6.53e-07,171 | |||
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| ||
|short_description=p2@SUV420H1 | |short_description=p2@SUV420H1 | ||
}} | }} |
Latest revision as of 19:54, 19 September 2015
Short description: | p2@SUV420H1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SUV420H1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000401547, ENST00000453170, NM_016028, NM_017635, uc001onm.1, uc001onn.1, uc001ono.1_5end |
EntrezGene: | SUV420H1 |
HGNC: | 24283 |
UniProt: | C9J6S5Q4FZB7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 7.02e-26 | 114 |
nervous system | 5.38e-15 | 89 |
central nervous system | 9.32e-14 | 81 |
neural tube | 2.23e-13 | 56 |
neural rod | 2.23e-13 | 56 |
future spinal cord | 2.23e-13 | 56 |
neural keel | 2.23e-13 | 56 |
regional part of nervous system | 4.82e-12 | 53 |
regional part of brain | 4.82e-12 | 53 |
regional part of forebrain | 7.04e-12 | 41 |
forebrain | 7.04e-12 | 41 |
anterior neural tube | 7.04e-12 | 41 |
future forebrain | 7.04e-12 | 41 |
brain | 1.81e-10 | 68 |
future brain | 1.81e-10 | 68 |
organ system subdivision | 5.23e-10 | 223 |
brain grey matter | 1.46e-09 | 34 |
gray matter | 1.46e-09 | 34 |
telencephalon | 2.27e-09 | 34 |
regional part of telencephalon | 5.46e-09 | 32 |
cerebral hemisphere | 5.71e-09 | 32 |
neurectoderm | 3.39e-08 | 86 |
regional part of cerebral cortex | 1.37e-07 | 22 |
cerebral cortex | 1.91e-07 | 25 |
pallium | 1.91e-07 | 25 |
neural plate | 2.35e-07 | 82 |
presumptive neural plate | 2.35e-07 | 82 |
neocortex | 3.92e-07 | 20 |
ectoderm-derived structure | 6.53e-07 | 171 |
ectoderm | 6.53e-07 | 171 |
presumptive ectoderm | 6.53e-07 | 171 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 3.69e-09 | 143 |