FFCP PHASE1:Hg19::chr3:119278493..119278513,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:119278493..119278513,-
|short_description=p3@CD80
|description=CAGE_peak_3_at_CD80_5end
|association_with_transcript=-12bp_to_NM_005191,uc003ecq.2_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=941 | |EntrezGene=941 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1700 | |HGNC=1700 | ||
|TSSclassifier=strong | |||
|UniProt=A0N0P2,P33681 | |UniProt=A0N0P2,P33681 | ||
|association_with_transcript=-12bp_to_NM_005191,uc003ecq.2_5end | |||
|cluster_id=chr3:119278493..119278513,- | |||
|coexpression_cluster_id=C730 | |||
|description=CAGE_peak_3_at_CD80_5end | |||
|id=chr3:119278493..119278513,- | |||
|ontology_enrichment_celltype=CL:0000738!5.00e-64!140;CL:0000988!3.58e-63!182;CL:0002032!5.22e-63!165;CL:0000837!5.22e-63!165;CL:0000037!1.50e-62!172;CL:0000566!1.50e-62!172;CL:0002031!6.27e-61!124;CL:0002087!1.85e-58!119;CL:0000763!4.37e-31!112;CL:0000049!4.37e-31!112;CL:0000557!6.92e-31!71;CL:0000945!1.24e-30!24;CL:0000826!1.24e-30!24;CL:0000542!8.33e-30!53;CL:0000051!8.33e-30!53;CL:0000839!1.26e-29!70;CL:0000838!1.42e-28!52;CL:0000766!1.42e-27!76;CL:0002009!3.02e-26!65;CL:0002194!1.28e-25!63;CL:0000576!1.28e-25!63;CL:0000040!1.28e-25!63;CL:0000559!1.28e-25!63;CL:0002057!1.81e-22!42;CL:0000860!2.26e-20!45;CL:0000134!1.04e-16!358;CL:0002320!6.77e-16!365;CL:0000236!2.66e-15!14;CL:0000219!1.41e-13!390;CL:0000990!3.72e-12!8;CL:0000048!1.09e-10!430;CL:0000723!3.31e-10!436;CL:0000034!3.99e-10!444;CL:0000451!1.39e-09!10;CL:0002274!9.97e-08!5;CL:0000457!9.97e-08!5;CL:0002191!9.97e-08!5;CL:0000097!9.97e-08!5;CL:0000831!9.97e-08!5;CL:0002028!9.97e-08!5;CL:0000080!2.73e-07!6;CL:0000840!2.80e-07!5;CL:0001029!2.80e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.69e-52;24!CL:0000236;3.53e-21;13!CL:0000542;2.60e-18;53!CL:0000990;1.29e-17;8!CL:0000451;3.35e-14;10!CL:0002087;1.27e-11;104!CL:0000453;2.00e-11;5!CL:0000738;6.65e-11;136!CL:0000473;2.30e-10;39!CL:0000234;2.30e-10;39!CL:0000860;1.26e-09;33!CL:0002057;1.26e-09;33!CL:0000840;6.30e-09;5!CL:0000988;7.84e-08;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.29e-52,24;CL:0000826,1.29e-52,24;CL:0000738,2.14e-43,136;CL:0002031,4.16e-41,120;CL:0000988,2.33e-39,177;CL:0002087,8.13e-39,115;CL:0002032,2.62e-38,161;CL:0000837,2.62e-38,161;CL:0000037,3.27e-36,168;CL:0000542,1.89e-30,53;CL:0000051,1.89e-30,53;CL:0000838,1.49e-28,52;CL:0000236,5.75e-24,14;CL:0000990,1.29e-17,8;CL:0000557,2.01e-14,67;CL:0000451,3.36e-14,10;CL:0000839,4.40e-13,66;CL:0002009,5.74e-13,61;CL:0000763,2.07e-12,108;CL:0000049,2.07e-12,108;CL:0002194,6.43e-12,59;CL:0000576,6.43e-12,59;CL:0000040,6.43e-12,59;CL:0000559,6.43e-12,59;CL:0000766,1.31e-11,72;CL:0000453,1.96e-11,5;CL:0000134,6.74e-11,354;CL:0000473,1.61e-10,48;CL:0000234,1.61e-10,48;CL:0002320,1.85e-10,361;CL:0000840,6.31e-09,5;CL:0001029,6.31e-09,5;CL:0000219,6.36e-09,386;CL:0000860,9.31e-08,42;CL:0002057,9.31e-08,42;CL:0000785,2.15e-07,2;CL:0000955,2.15e-07,2;CL:0000818,2.15e-07,2;CL:0000954,2.15e-07,2;CL:0000816,2.15e-07,2;CL:0000048,4.58e-07,427;CL:0000034,4.92e-07,441;CL:0000723,8.21e-07,433 | |||
|ontology_enrichment_development_v019=CL:0000051;2.60e-18;53!CL:0000954;2.94e-07;2 | |||
|ontology_enrichment_disease=DOID:0060058!5.92e-10!10;DOID:2531!3.62e-09!51;DOID:0060083!3.62e-09!51;DOID:1036!2.70e-08!8 | |||
|ontology_enrichment_disease_v019=DOID:0060058;1.36e-14;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,8.85e-15,10;DOID:2531,2.40e-07,51;DOID:0060083,2.40e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!4.12e-38!102;UBERON:0003061!4.12e-38!102;UBERON:0002193!6.98e-36!112;UBERON:0002371!1.51e-27!80;UBERON:0001474!1.17e-24!86;UBERON:0002405!1.18e-24!115;UBERON:0004765!5.51e-19!101;UBERON:0001434!5.51e-19!101;UBERON:0002384!8.54e-15!375;UBERON:0003081!1.07e-09!216;UBERON:0004177!8.64e-08!7;UBERON:0002204!8.65e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;7.79e-10;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.13e-18,98;UBERON:0003061,1.13e-18,98;UBERON:0002193,1.22e-17,108;UBERON:0002405,1.53e-16,93;UBERON:0002371,1.32e-13,76;UBERON:0001474,3.14e-12,82;UBERON:0004765,1.10e-10,90;UBERON:0002384,7.30e-10,371;UBERON:0002106,1.16e-09,3;UBERON:0004854,1.16e-09,3;UBERON:0009034,1.16e-09,3;UBERON:0002095,1.16e-09,3;UBERON:0004782,1.16e-09,3;UBERON:0003281,1.16e-09,3;UBERON:0009664,1.16e-09,3;UBERON:0002296,1.16e-09,3;UBERON:0005602,1.16e-09,3;UBERON:0001179,1.16e-09,3;UBERON:0006293,1.16e-09,3;UBERON:0001434,4.12e-09,100;UBERON:0004177,6.40e-07,7;UBERON:0005057,6.40e-07,7 | |||
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|short_description=p3@CD80 | |||
}} | }} |
Latest revision as of 20:17, 19 September 2015
Short description: | p3@CD80 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CD80_5end |
Coexpression cluster: | C730_migratory_cord_Mast_B_b_CD14_CD19 |
Association with transcript: | -12bp_to_NM_005191, uc003ecq.2_5end |
EntrezGene: | CD80 |
HGNC: | 1700 |
UniProt: | A0N0P2P33681 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.13e-18 | 98 |
blood island | 1.13e-18 | 98 |
hemolymphoid system | 1.22e-17 | 108 |
immune system | 1.53e-16 | 93 |
bone marrow | 1.32e-13 | 76 |
bone element | 3.14e-12 | 82 |
skeletal element | 1.10e-10 | 90 |
connective tissue | 7.30e-10 | 371 |
spleen | 1.16e-09 | 3 |
gastrointestinal system mesentery | 1.16e-09 | 3 |
stomach region | 1.16e-09 | 3 |
mesentery | 1.16e-09 | 3 |
gastrointestinal system serosa | 1.16e-09 | 3 |
mesentery of stomach | 1.16e-09 | 3 |
gut mesentery | 1.16e-09 | 3 |
dorsal mesentery | 1.16e-09 | 3 |
dorsal mesogastrium | 1.16e-09 | 3 |
peritoneal cavity | 1.16e-09 | 3 |
spleen primordium | 1.16e-09 | 3 |
skeletal system | 4.12e-09 | 100 |
hemopoietic organ | 6.40e-07 | 7 |
immune organ | 6.40e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 8.85e-15 | 10 |
hematologic cancer | 2.40e-07 | 51 |
immune system cancer | 2.40e-07 | 51 |