FFCP PHASE1:Hg19::chr12:64616019..64616082,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:64616019..64616082,- to FFCP PHASE1:Hg19::chr12:64616019..64616082,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=144577 | |EntrezGene=144577 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26517 | |HGNC=26517 | ||
|TSSclassifier=strong | |||
|UniProt=Q96MD2,F5H2Q3 | |UniProt=Q96MD2,F5H2Q3 | ||
|association_with_transcript=0bp_to_ENST00000311915,ENST00000398055,ENST00000540673,ENST00000544871,NM_152440,uc001srw.3,uc009zql.2_5end | |||
|cluster_id=chr12:64616019..64616082,- | |||
|description=CAGE_peak_1_at_C12orf66_5end | |||
|id=chr12:64616019..64616082,- | |||
|ontology_enrichment_celltype=CL:0000542!3.38e-23!53;CL:0000051!3.38e-23!53;CL:0000838!8.13e-23!52;CL:0000945!9.29e-12!24;CL:0000826!9.29e-12!24;CL:0000084!5.46e-11!25;CL:0000827!5.46e-11!25;CL:0000791!1.10e-10!18;CL:0000789!1.10e-10!18;CL:0002420!1.10e-10!18;CL:0002419!1.10e-10!18;CL:0000790!1.10e-10!18;CL:0000236!1.69e-08!14;CL:0000625!1.92e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000542;9.94e-14;53!CL:0000945;1.13e-11;24!CL:0000084;8.23e-11;25!CL:0000791;8.57e-11;18!CL:0000789;8.57e-11;18!CL:0002419;8.57e-11;18!CL:0000236;3.61e-08;13!CL:0000625;1.54e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,3.37e-23,53;CL:0000051,3.37e-23,53;CL:0000838,8.12e-23,52;CL:0000945,9.28e-12,24;CL:0000826,9.28e-12,24;CL:0000084,5.45e-11,25;CL:0000827,5.45e-11,25;CL:0000791,1.10e-10,18;CL:0000789,1.10e-10,18;CL:0002420,1.10e-10,18;CL:0002419,1.10e-10,18;CL:0000790,1.10e-10,18;CL:0000236,1.68e-08,14;CL:0000625,1.92e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000051;9.94e-14;53!CL:0000790;8.57e-11;18 | |||
|ontology_enrichment_disease=DOID:162!8.30e-08!235;DOID:14566!9.94e-08!239;DOID:305!3.89e-07!106;DOID:0050687!5.14e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,8.19e-08,235;DOID:14566,9.99e-08,239;DOID:305,3.89e-07,106;DOID:0050687,4.99e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0007023!8.15e-10!115;UBERON:0001049!3.14e-09!57;UBERON:0005068!3.14e-09!57;UBERON:0006241!3.14e-09!57;UBERON:0007135!3.14e-09!57;UBERON:0002780!2.03e-08!41;UBERON:0001890!2.03e-08!41;UBERON:0006240!2.03e-08!41;UBERON:0003080!3.46e-08!42;UBERON:0001893!1.56e-07!34;UBERON:0002020!3.69e-07!34;UBERON:0003528!3.69e-07!34;UBERON:0002791!3.91e-07!33;UBERON:0000073!5.80e-07!94;UBERON:0001016!5.80e-07!94;UBERON:0002616!9.91e-07!59 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.37e-09,114;UBERON:0001049,1.97e-09,56;UBERON:0005068,1.97e-09,56;UBERON:0006241,1.97e-09,56;UBERON:0007135,1.97e-09,56;UBERON:0000073,7.81e-09,53;UBERON:0002616,7.81e-09,53;UBERON:0002780,2.03e-08,41;UBERON:0001890,2.03e-08,41;UBERON:0003080,2.03e-08,41;UBERON:0006240,2.03e-08,41;UBERON:0001893,1.56e-07,34;UBERON:0003528,3.69e-07,34;UBERON:0002020,3.69e-07,34;UBERON:0001016,5.57e-07,89 | |||
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| ||
|short_description=p1@C12orf66 | |||
}} | }} |
Latest revision as of 20:21, 19 September 2015
Short description: | p1@C12orf66 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C12orf66_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000311915, ENST00000398055, ENST00000540673, ENST00000544871, NM_152440, uc001srw.3, uc009zql.2_5end |
EntrezGene: | C12orf66 |
HGNC: | 26517 |
UniProt: | Q96MD2F5H2Q3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 3.37e-23 | 53 |
common lymphoid progenitor | 3.37e-23 | 53 |
lymphoid lineage restricted progenitor cell | 8.12e-23 | 52 |
lymphocyte of B lineage | 9.28e-12 | 24 |
pro-B cell | 9.28e-12 | 24 |
T cell | 5.45e-11 | 25 |
pro-T cell | 5.45e-11 | 25 |
mature alpha-beta T cell | 1.10e-10 | 18 |
alpha-beta T cell | 1.10e-10 | 18 |
immature T cell | 1.10e-10 | 18 |
mature T cell | 1.10e-10 | 18 |
immature alpha-beta T cell | 1.10e-10 | 18 |
B cell | 1.68e-08 | 14 |
CD8-positive, alpha-beta T cell | 1.92e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.37e-09 | 114 |
neural tube | 1.97e-09 | 56 |
neural rod | 1.97e-09 | 56 |
future spinal cord | 1.97e-09 | 56 |
neural keel | 1.97e-09 | 56 |
regional part of nervous system | 7.81e-09 | 53 |
regional part of brain | 7.81e-09 | 53 |
regional part of forebrain | 2.03e-08 | 41 |
forebrain | 2.03e-08 | 41 |
anterior neural tube | 2.03e-08 | 41 |
future forebrain | 2.03e-08 | 41 |
telencephalon | 1.56e-07 | 34 |
brain grey matter | 3.69e-07 | 34 |
gray matter | 3.69e-07 | 34 |
nervous system | 5.57e-07 | 89 |
Ontology term | p-value | n |
---|---|---|
cancer | 8.19e-08 | 235 |
disease of cellular proliferation | 9.99e-08 | 239 |
carcinoma | 3.89e-07 | 106 |
cell type cancer | 4.99e-07 | 143 |