FFCP PHASE1:Hg19::chr12:6484605..6484629,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:6484605..6484629,- to FFCP PHASE1:Hg19::chr12:6484605..6484629,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6337 | |EntrezGene=6337 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10599 | |HGNC=10599 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-5bp_to_ENST00000538979_5end | |||
|cluster_id=chr12:6484605..6484629,- | |||
|coexpression_cluster_id=C3317 | |||
|description=CAGE_peak_1_at_SCNN1A_5end | |||
|id=chr12:6484605..6484629,- | |||
|ontology_enrichment_celltype=CL:0000066!2.72e-32!254;CL:0002076!3.77e-19!43;CL:0000223!5.69e-19!59;CL:0002251!2.73e-09!21;CL:0002368!1.11e-08!13 | |||
|ontology_enrichment_celltype_v019=CL:0002076;1.95e-14;42!CL:0002368;9.92e-10;13!CL:1000507;2.93e-09;10!CL:1000494;2.93e-09;10!CL:1000449;5.32e-08;15!CL:0002251;8.75e-08;20!CL:0002202;7.01e-07;9!CL:0002632;7.01e-07;9!CL:0002322;9.32e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.82e-23,253;CL:0002076,1.20e-18,42;CL:0000223,1.81e-17,58;CL:0002368,1.03e-09,13;CL:1000507,2.80e-09,10;CL:1000494,2.80e-09,10;CL:1000449,5.04e-08,15;CL:0002251,9.32e-08,20;CL:0002202,7.18e-07,9;CL:0002632,7.18e-07,9;CL:0002322,9.11e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000223;1.65e-09;58!UBERON:0006595;3.68e-07;86!UBERON:0009117;6.16e-07;10!UBERON:0005564;6.16e-07;10 | |||
|ontology_enrichment_disease=DOID:305!1.11e-22!106;DOID:0050687!6.35e-15!143;DOID:299!1.46e-09!25 | |||
|ontology_enrichment_disease_v019=DOID:1749;2.34e-07;14!DOID:299;3.18e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,5.24e-14,106;DOID:0050687,8.86e-09,143;DOID:1749,2.49e-07,14;DOID:299,2.94e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.37e-27!169;UBERON:0000925!2.37e-27!169;UBERON:0006595!2.37e-27!169;UBERON:0001007!7.22e-22!155;UBERON:0001555!7.22e-22!155;UBERON:0007026!7.22e-22!155;UBERON:0004921!7.52e-22!129;UBERON:0004185!7.52e-22!129;UBERON:0000077!2.12e-20!130;UBERON:0000466!1.57e-17!126;UBERON:0000464!4.15e-17!104;UBERON:0001004!1.84e-15!72;UBERON:0001041!3.45e-15!98;UBERON:0005177!1.54e-13!107;UBERON:0000062!5.41e-13!511;UBERON:0000065!2.40e-12!53;UBERON:0005911!3.74e-12!82;UBERON:0000481!2.19e-11!347;UBERON:0000922!5.12e-11!612;UBERON:0001008!1.53e-10!45;UBERON:0006554!4.20e-10!44;UBERON:0008947!5.92e-10!38;UBERON:0003258!5.92e-10!38;UBERON:0001048!9.23e-10!168;UBERON:0000468!1.16e-09!659;UBERON:0005153!2.18e-09!37;UBERON:0002553!2.86e-09!70;UBERON:0005178!3.87e-09!34;UBERON:0002224!3.87e-09!34;UBERON:0003104!4.11e-09!238;UBERON:0009142!4.11e-09!238;UBERON:0000063!4.45e-09!97;UBERON:0000058!1.05e-08!26;UBERON:0005156!1.06e-08!59;UBERON:0000990!1.06e-08!59;UBERON:0000064!1.10e-08!219;UBERON:0000072!1.10e-08!46;UBERON:0005181!1.22e-08!35;UBERON:0002050!1.51e-08!605;UBERON:0005423!1.51e-08!605;UBERON:0000923!3.14e-08!604;UBERON:0005291!3.14e-08!604;UBERON:0006598!3.14e-08!604;UBERON:0002532!3.14e-08!604;UBERON:0000161!3.62e-08!35;UBERON:0009569!5.73e-08!113;UBERON:0003133!5.95e-08!48;UBERON:0002048!9.04e-08!22;UBERON:0000117!9.04e-08!22;UBERON:0000171!9.04e-08!22;UBERON:0000170!9.04e-08!22;UBERON:0005597!9.04e-08!22;UBERON:0000118!9.04e-08!22;UBERON:0003135!1.22e-07!11;UBERON:0000489!3.69e-07!32;UBERON:0003101!3.77e-07!22;UBERON:0000079!3.77e-07!22;UBERON:0000467!3.78e-07!625;UBERON:0003064!4.27e-07!37;UBERON:0000480!4.75e-07!626;UBERON:0002113!5.93e-07!27;UBERON:0003918!5.93e-07!27;UBERON:0005095!5.93e-07!27;UBERON:0007687!5.93e-07!27;UBERON:0005157!7.17e-07!51;UBERON:0004175!9.40e-07!25;UBERON:0000080!9.42e-07!18;UBERON:0002120!9.42e-07!18;UBERON:0004875!9.42e-07!18;UBERON:0005721!9.42e-07!18;UBERON:0005754!9.42e-07!18;UBERON:0007297!9.42e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;3.26e-12;33!UBERON:0006554;1.66e-11;30!UBERON:0001008;1.66e-11;30!UBERON:0005178;1.98e-09;34!UBERON:0002224;1.98e-09;34!UBERON:0004211;2.93e-09;10!UBERON:0009773;2.93e-09;10!UBERON:0001231;2.93e-09;10!UBERON:0004810;2.93e-09;10!UBERON:0005181;2.03e-08;35!UBERON:0003135;2.32e-08;11!UBERON:0005409;4.74e-08;22!UBERON:0006555;5.32e-08;15!UBERON:0004819;5.32e-08;15!UBERON:0001285;5.32e-08;15!UBERON:0007684;5.32e-08;15!UBERON:0002113;7.00e-08;24!UBERON:0011143;7.00e-08;24!UBERON:0002048;7.38e-08;22!UBERON:0000117;7.38e-08;22!UBERON:0000171;7.38e-08;22!UBERON:0000170;7.38e-08;22!UBERON:0003101;8.22e-08;22!UBERON:0000079;8.22e-08;22!UBERON:0000489;1.18e-07;29!UBERON:0001041;2.73e-07;14!UBERON:0001555;3.01e-07;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.57e-22,160;UBERON:0000925,1.57e-22,160;UBERON:0006595,1.57e-22,160;UBERON:0004921,2.31e-17,118;UBERON:0001007,3.67e-17,145;UBERON:0001555,3.67e-17,145;UBERON:0007026,3.67e-17,145;UBERON:0001008,2.04e-16,48;UBERON:0006554,8.22e-16,47;UBERON:0005177,2.67e-14,101;UBERON:0001004,1.75e-11,74;UBERON:0005178,1.88e-10,34;UBERON:0002224,1.88e-10,34;UBERON:0005156,3.72e-10,59;UBERON:0000990,3.72e-10,59;UBERON:0005153,4.47e-10,37;UBERON:0001041,5.23e-10,87;UBERON:0005181,5.74e-10,35;UBERON:0002113,1.72e-09,26;UBERON:0003918,1.72e-09,26;UBERON:0011143,1.72e-09,26;UBERON:0005095,1.72e-09,26;UBERON:0007687,1.72e-09,26;UBERON:0005911,1.97e-09,82;UBERON:0003133,2.42e-09,48;UBERON:0004810,2.80e-09,10;UBERON:0000489,3.69e-09,31;UBERON:0000065,3.73e-09,54;UBERON:0006555,7.72e-09,16;UBERON:0004819,7.72e-09,16;UBERON:0009569,8.83e-09,112;UBERON:0003135,2.27e-08,11;UBERON:0005157,3.24e-08,47;UBERON:0004211,5.04e-08,15;UBERON:0009773,5.04e-08,15;UBERON:0001231,5.04e-08,15;UBERON:0001285,5.04e-08,15;UBERON:0007684,5.04e-08,15;UBERON:0004208,5.04e-08,15;UBERON:0000161,6.23e-08,36;UBERON:0002048,7.31e-08,22;UBERON:0000117,7.31e-08,22;UBERON:0000171,7.31e-08,22;UBERON:0000170,7.31e-08,22;UBERON:0005597,7.31e-08,22;UBERON:0000118,7.31e-08,22;UBERON:0004175,7.90e-08,25;UBERON:0003101,7.94e-08,22;UBERON:0000079,7.94e-08,22;UBERON:0000922,1.23e-07,592;UBERON:0002553,5.34e-07,61 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,19.4129809836192,53.0328887659045,39.319446983431,42.2027165165526,0.123766352960047,0.331397375727916,0,0,0,0,0.246242116153576,0.816002764977012,0.313454721478088,0.286235987131057,0.273748850145768,0.125542639594803,0,0,0,0,0,0,8.27479102031034,6.32532429434325,16.2691764473387,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.7403870684676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.12786256184353,0,0,0,0,0,0.378139268656271,0.443458794925128,0.43917392846563,22.2664428346111,16.7575832614569,10.7527488407485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.0904895978349,0,0,0,0,0,0,0,0,0,0,0,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93260853163297,1.09098448236334,0.860413786167011,35.3723747775827,52.7468477919511,38.9249708612887,22.39078788332,26.9983310436922,15.3290490811849,0,0,0,0,0,0.118306800039844,0.674338760312407,0.241011029883482,0.441175890929576,0.435758888184812,0,0.404493924480493,0.392442930250692,0,0,0,0.4115740113314,0,0,0,0.590789906681404,0,46.1206644536676,0.514703430895577,1.20725313949488,2.24803506515239,0.502644862058154,2.68506490959736,0,0,1.44331342025273,0,0.117408694235822,0,0,0,1.58040879591855,0.858486162094873,0,0,0,0,0.16798212819886,0.283550194484773,28.5691687422086,37.4917780683011,41.788712029008,0,0,0.829312462163088,0.576479813667846,0.6312121671319,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0.500170521059677,0.271265023699736,0,0,0,0,0,0,0,0,0.184369168541703,0,0.391602314925481,0,0,0,0,7.27506171471023,24.9653159265746,10.5836602665388,0,0,0,0,0,0,0,0,0,0,0,0,31.1817379946385,8.02025881213139,25.782676902051,0,0,0,45.5711609036486,10.397070509096,12.5495963068297,4.38417673959782,3.9054102690364,0,0,0,1.54227252690289,3.52230368807009,4.01351819083883,48.4264918785573,92.2494369910884,4.25362033972139,0,0,0,1.31205858279882,0.325378394664303,13.7044545491471,0,0,0,0.650060246036521,0,0,0,0,0,0.107420244868274,0,0,0,6.61139661443912,10.1860735703506,19.1419068741876,6.67641353646629,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,9.23732282164916,16.7575568883947,9.80018863751903,14.8747205227311,6.45758059006845,11.7930032967338,11.0857538384169,2.98640420269047,0,0,0,0,0,0,0,0,1.81600920916704,6.73735898684351,15.9276140387671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.6555080963316,0,0,0,0.284136146806413,6.92359005739301,0,0.614321404198464,0,0,0,0,7.38938928447977,7.37217556528958,10.2225048746525,0,0.613612095012929,0,0,0.449341755736634,35.0881502364194,0,11.2453482426104,0,0,0,0.185536196323703,0,0.260427761085233,0,7.24999575434793,17.4103975876814,40.4263303965498,37.8220290828698,0,0,0,0,0,0,0,0,1.53569778007781,0.10893846351899,2.09135616417905,19.0836641089417,0,0.23056390438806,2.51321404347362,0.325942115766024,1.27600463892768,0.183195186803725,7.99552164027952,0,0,0,0,0,0,0,0,0.843992258112108,14.8541855424824,14.9834255719977,0.216388639742091,29.8578579323551,12.2956014659641,21.3860550726769,0,0,0,0.876214728748802,0,0,0,77.8745183349717,5.58394872928413,53.6634787875171,8.46935012340647,0,0.063186579628488,0,0,0.664653872707185,0,0,0,31.8762691553368,0.277349346026277,22.2156465068968,51.4460086425483,1.13176968554523,17.647393492445,0,0,0,0,83.4105541800407,0.529536760149002,4.74559555639118,0,0,0,49.2789484491704,0.160317640503067,10.2457437474889,0.599428828746391,30.9794396881328,0,0,0,0,46.1960307848919,0,0,0,0,0,0,0,0,0,0,0,0,17.3720730434122,0,0,0.0671834724867263,0,10.4846354574708,2.28471228690949,1.40106959247983,1.55028150864625,0.196854963029498,0,0,0.408610218334727,14.3070302133867,17.8801267576404,19.5256958873717,2.0247650239635,7.7380195455795,0.0607495566580247,1.67717343799633,100.319665391879,47.3664930859033,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0.439656701034247,0,0,0,0,167.041160289051,85.2163552290204,32.6984954607305,32.7248853724284,0,0,0,3.19170628885091,0,0,0,0,103.969811717655,0,0,0,13.1884115008716,3.21694249456872,1.42821726765182,0,0.249960815924213,0,0,0,153.14551419885,99.8505887128585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0.308801447160972,0.877136198314828,0,0.578742114812744,3.20990637240838,0,0,0.303859956177382,0,0,0,0.163565394255844,0,0.245772908753719,3.38099397373803,0,0,0,0,0,5.87493932421667,21.1506268411211,0,0,0,0,0,0,0,0,0,0,64.846230611123,0,0,0,1.41696576325585,0,0,0,0,0,0,9.22588553909641,25.3634905197642,0.550285795565037,15.711490596446,0,0,0,6.46808823803612,0,12.5042241797295,0.261906694481422,0,28.9797928985409,0,0,0,0,0,15.8994752388583,12.9014906381217,0,27.3411595148734,0,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| ||
|short_description=p1@SCNN1A | |||
}} | }} |
Latest revision as of 20:51, 19 September 2015
Short description: | p1@SCNN1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SCNN1A_5end |
Coexpression cluster: | C3317_smallcell_lung_merkel_small_kidney_bronchioalveolar_Renal |
Association with transcript: | -5bp_to_ENST00000538979_5end |
EntrezGene: | SCNN1A |
HGNC: | 10599 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.82e-23 | 253 |
endo-epithelial cell | 1.20e-18 | 42 |
endodermal cell | 1.81e-17 | 58 |
respiratory epithelial cell | 1.03e-09 | 13 |
kidney tubule cell | 2.80e-09 | 10 |
nephron tubule epithelial cell | 2.80e-09 | 10 |
epithelial cell of nephron | 5.04e-08 | 15 |
epithelial cell of alimentary canal | 9.32e-08 | 20 |
epithelial cell of tracheobronchial tree | 7.18e-07 | 9 |
epithelial cell of lower respiratory tract | 7.18e-07 | 9 |
embryonic stem cell | 9.11e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 5.24e-14 | 106 |
cell type cancer | 8.86e-09 | 143 |
squamous cell carcinoma | 2.49e-07 | 14 |
adenocarcinoma | 2.94e-07 | 25 |