FFCP PHASE1:Hg19::chr18:53257001..53257015,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6925 | |EntrezGene=6925 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11634 | |HGNC=11634 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z5M6 | |UniProt=B7Z5M6 | ||
|association_with_transcript=29bp_to_ENST00000537578,NM_001243227,NM_001243228,uc010dpi.2,uc010xdy.1_5end | |association_with_transcript=29bp_to_ENST00000537578,NM_001243227,NM_001243228,uc010dpi.2,uc010xdy.1_5end | ||
|cluster_id=chr18:53257001..53257015,- | |||
|coexpression_cluster_id=C44 | |coexpression_cluster_id=C44 | ||
|description=CAGE_peak_5_at_TCF4_5end | |description=CAGE_peak_5_at_TCF4_5end | ||
|id=chr18:53257001..53257015,- | |id=chr18:53257001..53257015,- | ||
|ontology_enrichment_celltype=CL:0002139;1.46e-14;24!CL:0000071;2.30e-10;18!CL:0000115;7.87e-10;36 | |ontology_enrichment_celltype=CL:0002139!2.97e-13!24;CL:0000115!1.73e-10!35;CL:0000071!1.14e-09!18;CL:0002546!1.14e-09!18;CL:0002078!2.87e-07!44 | ||
| | |ontology_enrichment_celltype_v019=CL:0002139;1.46e-14;24!CL:0000071;2.30e-10;18!CL:0000115;7.87e-10;36 | ||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.38e-14,24;CL:0000115,1.32e-11,36;CL:0000071,2.13e-10,18;CL:0002546,2.13e-10,18;CL:0002078,2.35e-08,45 | |||
|ontology_enrichment_development_v019=CL:0002546;2.30e-10;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0004638;2.30e-10;18!UBERON:0001986;2.30e-10;18!UBERON:0004852;2.30e-10;18!UBERON:0000487;1.57e-08;22!UBERON:0006914;2.48e-08;25!UBERON:0000956;4.45e-08;25!UBERON:0000203;4.45e-08;25!UBERON:0002619;1.57e-07;22!UBERON:0001869;3.15e-07;32!UBERON:0003528;4.44e-07;34!UBERON:0002020;4.44e-07;34!UBERON:0002791;4.58e-07;32!UBERON:0001893;5.68e-07;34 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.25e-15!115;UBERON:0001017!1.39e-13!82;UBERON:0000073!2.18e-13!94;UBERON:0001016!2.18e-13!94;UBERON:0005743!8.21e-13!86;UBERON:0001049!2.17e-10!57;UBERON:0005068!2.17e-10!57;UBERON:0006241!2.17e-10!57;UBERON:0007135!2.17e-10!57;UBERON:0000955!3.26e-10!69;UBERON:0006238!3.26e-10!69;UBERON:0002616!4.77e-10!59;UBERON:0001986!1.14e-09!18;UBERON:0004638!1.14e-09!18;UBERON:0004852!1.14e-09!18;UBERON:0001009!8.90e-09!113;UBERON:0000055!9.25e-09!69;UBERON:0002049!1.24e-08!79;UBERON:0007798!1.24e-08!79;UBERON:0003080!2.65e-08!42;UBERON:0004535!2.68e-08!110;UBERON:0002780!5.85e-08!41;UBERON:0001890!5.85e-08!41;UBERON:0006240!5.85e-08!41;UBERON:0004872!6.85e-08!84;UBERON:0001981!1.04e-07!60;UBERON:0007500!1.04e-07!60;UBERON:0004537!1.04e-07!60;UBERON:0006965!1.04e-07!60;UBERON:0006914!1.38e-07!25;UBERON:0000487!1.59e-07!22;UBERON:0000025!1.69e-07!194;UBERON:0001893!2.38e-07!34;UBERON:0000479!2.47e-07!787;UBERON:0002020!2.58e-07!34;UBERON:0003528!2.58e-07!34;UBERON:0002791!3.79e-07!33;UBERON:0001869!4.33e-07!32;UBERON:0004111!4.69e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.30e-10;18!UBERON:0001986;2.30e-10;18!UBERON:0004852;2.30e-10;18!UBERON:0000487;1.57e-08;22!UBERON:0006914;2.48e-08;25!UBERON:0000956;4.45e-08;25!UBERON:0000203;4.45e-08;25!UBERON:0002619;1.57e-07;22!UBERON:0001869;3.15e-07;32!UBERON:0003528;4.44e-07;34!UBERON:0002020;4.44e-07;34!UBERON:0002791;4.58e-07;32!UBERON:0001893;5.68e-07;34 | |||
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|phase1_expression=3.63356758541113,0.856402095563933,2.11431606143957,2.00146596706261,1.78784437770915,0.872338524100369,0,0,0.522371256399677,1.22866968250754,0,0,0,0.618831764800233,0.331397375727916,1.34465029290355,1.20538905604795,1.46062018077475,2.43966399395253,2.95490539384291,0.408001382488506,1.88072832886853,4.29353980696585,1.23186982565596,1.50651167513763,0,0,0,0.786728553697808,4.60595277716655,4.33485145285013,0,0,0,0.852139206383318,0,20.8456311927742,2.76997704265939,0.601633342410425,0.651032612147555,0.671746422719773,0,0.77272670290256,1.16318591023652,0,0.727752183563449,0.697287110717054,0.411167888021826,3.40677007984614,0.575384784644301,1.5369642391746,2.36482229888585,3.10271112662957,1.29096936716765,1.35426486594342,0.941211697713023,1.09162460023138,1.57306439111559,4.59125838556354,4.8139354061414,5.75403413219137,0.659702600373432,1.39624560335142,1.70489900213078,1.45104619314292,0.56738522469114,3.11411124497787,1.25624332628372,1.0429658368404,1.3031330682307,1.21079900526674,4.05105399586321,3.16462387440884,0.211255286311942,0.212604299965044,0.628975936525128,0.561643155732475,0.600707571366025,1.44653028027372,0.285012743741249,0.39783335439818,0.365328307529268,1.75996244461323,1.63841583378639,0,2.56038133539904,2.80277190925209,3.4485146397269,0.661044872784862,1.90810750907073,4.55370375287559,8.22132065119314,11.8504700718821,33.0428321447565,22.4203425192614,11.0621315605532,0.196709770113833,0,0,0,0.32592226663359,0.473447805734733,0,0,0.589211814949674,1.32920336750173,0.270803863765016,0,0,0,0,0.289803085735052,0.296573126324121,0.267540828089713,0,0,0,0,0,0.318565414324097,0,0,0.451725357233318,0.511946444617674,0,0,0,0,0,0.144824403882799,0,0.670700859703636,0.511450247374121,0.722878304769133,1.00267582127178,0.724232594804119,6.36228757640879,0.486634870302636,1.98523116044542,1.10864698731282,1.31752178539689,2.29213382120997,0.364295288292542,0,1.62273696827342,0.522389211897802,0.132957960518865,141.663430837373,133.27481421177,151.183203041133,13.1183188862025,1.72046919021225,9.02565304179745,5.08777147731609,4.19499436209906,3.57653454522088,5.8518590630307,14.2129217543131,9.96145535522789,22.7610016679976,5.63961043952806,7.60272105718513,4.14905497831888,6.25027236587977,5.67099363517232,9.91226983953285,8.98117490504679,7.20713475093262,7.66583187329416,0.949265659568129,6.22885929363385,0,0,0,1.49091585508596,1.51956613997496,0.529636723252875,2.0078563452417,0.354668382198357,0,1.06748995729705,0.49333509683432,2.8008993185979,12.2586711583416,9.31732847746715,3.17850598054356,1.72852777344,0,0,1.1409436430889,0,0.352303495931295,0,0.561803226808994,0,0.368502951935304,0.309977343527296,1.18800285728205,0,0,0,0,0.250237039743928,0.554128230968366,0.877955241761676,0.612975591598039,0.45071417671979,2.04177929688038,1.97328599257748,4.05759038755278,1.05965950579781,3.00091096084402,2.06105058476878,2.57640540045629,1.8611685633159,3.71307930930786,5.16416127354353,3.02920529092937,3.40584624976508,1.77810662500693,4.26011511019937,2.31729825923573,0.847802961552438,0,0,0,0.243947412259191,0.795178609928912,1.04574548582567,1.14027160516907,0.756962552626885,0.72995471815166,0,1.28648187638577,1.38134921352481,2.3218396401599,0,0,0,0,0,0.217879444092406,0,0,0,0,2.95262181849859,4.20725321410337,1.2347220339942,0,0,0,0,0,0,0.343135620597051,0.109750285408626,0,0,0.0925884451585296,0,1.03993478527958,0,0.231860809950154,1.17408694235822,5.19719211939866,7.87075371380238,8.56143685055692,0,0,0.492434012174795,0,0,0,0.16798212819886,0,0,0,0,0,0,1.65862492432618,0.864719720501769,0.75745460055828,0,0,0,0,0,0,0,0.336393253036082,0,0.2933531432838,2.97324946242889,3.57656445851882,0.845302752556,1.06375246633948,1.04007436911366,0,0,0.266422179016099,0.714889968290738,0.542621605391443,0,1.62868092146868,0.355391948742546,0,3.61727252471503,0.871533458600294,2.0994328148232,0,1.00451418286425,0,0.239624855491583,0,1.42636905040718,0.579125226670317,0.205476322550383,0.716243852959582,0,0.788123040807709,0.215627574859517,0.128343036279748,2.7950408664471,13.0139853857622,8.50617694055465,11.2235897774014,5.74144876487847,0,0,0,2.20844685094452,0,0.542530047399471,0,0,0.473107245101804,0.117141414992713,0.902838299183157,0,0,2.65690239414175,0.368738337083406,1.04260337361699,0.391602314925481,0.343143423810856,2.48121631347465,1.94142780736755,2.45473382947922,0,0,0,1.98486246255021,5.83155498494637,1.96462066103151,1.79394808957981,4.09365799253363,2.2519548960105,0,0.462629081407967,1.59805552781814,1.97105174433142,3.63478100428535,0.929683027679674,0,0.40101294060657,0,0.34444334449382,0.364182336013434,0.131124414959424,0,0,0,0,0.105551628892876,1.13733384070897,3.91215522135986,2.80690690932781,7.71136263451447,0,0.501689773854853,0,0,0.447749509444357,0,0,0,0.328014645699706,0.650756789328606,2.88514832613622,0.366277859273374,0.082509499920588,0,0.650060246036521,1.6068392984416,1.54673149267395,1.23238893691716,1.38153307253517,1.6540388698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| ||
|short_description=p5@TCF4 | |short_description=p5@TCF4 | ||
}} | }} |
Latest revision as of 21:25, 19 September 2015
Short description: | p5@TCF4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TCF4_5end |
Coexpression cluster: | C44_Dendritic_CD19_CD133_granulocyte_acute_thymus_immature |
Association with transcript: | 29bp_to_ENST00000537578, NM_001243227, NM_001243228, uc010dpi.2, uc010xdy.1_5end |
EntrezGene: | TCF4 |
HGNC: | 11634 |
UniProt: | B7Z5M6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.38e-14 | 24 |
endothelial cell | 1.32e-11 | 36 |
blood vessel endothelial cell | 2.13e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.13e-10 | 18 |
meso-epithelial cell | 2.35e-08 | 45 |