FFCP PHASE1:Hg19::chr1:204183071..204183152,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:204183071..204183152,-
|short_description=p1@GOLT1A
|description=CAGE_peak_1_at_GOLT1A_5end
|association_with_transcript=67bp_to_ENST00000308302,NM_198447,...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=127845 | |EntrezGene=127845 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24766 | |HGNC=24766 | ||
|TSSclassifier=strong | |||
|UniProt=Q6ZVE7 | |UniProt=Q6ZVE7 | ||
|association_with_transcript=67bp_to_ENST00000308302,NM_198447,uc001has.1,uc001hat.1_5end | |||
|cluster_id=chr1:204183071..204183152,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_1_at_GOLT1A_5end | |||
|id=chr1:204183071..204183152,- | |||
|ontology_enrichment_celltype=CL:0000066!5.07e-22!254;CL:0000223!1.17e-07!59;CL:1000497!3.99e-07!18;CL:0002518!3.99e-07!18;CL:1000507!4.22e-07!12;CL:1000494!4.22e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:1000507;8.00e-12;10!CL:1000494;8.00e-12;10!CL:1000497;2.48e-11;17!CL:0002518;2.48e-11;17!CL:1000449;3.14e-09;15!CL:0000182;3.45e-09;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.47e-19,253;CL:1000507,8.31e-12,10;CL:1000494,8.31e-12,10;CL:1000497,2.87e-11,17;CL:0002518,2.87e-11,17;CL:1000449,3.23e-09,15;CL:0000182,3.48e-09,12;CL:0000223,1.30e-08,58 | |||
|ontology_enrichment_development_v019=UBERON:0001041;2.59e-16;30!UBERON:0009497;6.54e-13;13!UBERON:0004161;6.76e-10;11!UBERON:0003104;3.31e-09;31!UBERON:0006595;1.18e-08;86!UBERON:0008947;2.87e-07;29 | |||
|ontology_enrichment_disease=DOID:305!1.82e-27!106;DOID:0050687!7.82e-20!143;DOID:299!1.69e-10!25 | |||
|ontology_enrichment_disease_v019=DOID:299;3.60e-13;25!DOID:305;1.28e-09;106!DOID:3119;4.66e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,4.27e-30,106;DOID:0050687,3.89e-21,143;DOID:299,3.41e-13,25;DOID:162,1.57e-09,235;DOID:14566,5.01e-09,239;DOID:7,3.94e-07,39;DOID:3119,5.11e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0004921!6.96e-20!129;UBERON:0004185!6.96e-20!129;UBERON:0001007!3.90e-19!155;UBERON:0001555!3.90e-19!155;UBERON:0007026!3.90e-19!155;UBERON:0000481!1.16e-18!347;UBERON:0004119!2.04e-18!169;UBERON:0000925!2.04e-18!169;UBERON:0006595!2.04e-18!169;UBERON:0000077!2.24e-15!130;UBERON:0007023!4.12e-15!115;UBERON:0005911!5.15e-13!82;UBERON:0005177!6.00e-13!107;UBERON:0005172!9.91e-13!55;UBERON:0005173!9.91e-13!55;UBERON:0000466!9.83e-12!126;UBERON:0001008!1.10e-11!45;UBERON:0003929!2.22e-11!54;UBERON:0000477!4.01e-11!286;UBERON:0009569!4.26e-11!113;UBERON:0006554!4.71e-11!44;UBERON:0004111!8.27e-11!241;UBERON:0000483!1.52e-10!309;UBERON:0001041!1.60e-10!98;UBERON:0001048!1.80e-10!168;UBERON:0002417!2.47e-10!61;UBERON:0000916!2.47e-10!61;UBERON:0000119!3.75e-10!312;UBERON:0003104!4.02e-10!238;UBERON:0009142!4.02e-10!238;UBERON:0003064!1.06e-09!37;UBERON:0000062!1.78e-09!511;UBERON:0000489!1.79e-09!32;UBERON:0002530!2.30e-09!59;UBERON:0000058!5.00e-09!26;UBERON:0002113!9.39e-09!27;UBERON:0003918!9.39e-09!27;UBERON:0005095!9.39e-09!27;UBERON:0007687!9.39e-09!27;UBERON:0009497!1.17e-08!25;UBERON:0000015!1.17e-08!25;UBERON:0002423!1.17e-08!25;UBERON:0006235!1.17e-08!25;UBERON:0004161!1.17e-08!25;UBERON:0000025!1.48e-08!194;UBERON:0000475!5.11e-08!365;UBERON:0009856!5.12e-08!26;UBERON:0000064!6.02e-08!219;UBERON:0001046!1.20e-07!19;UBERON:0000063!1.53e-07!97;UBERON:0007499!1.67e-07!25;UBERON:0005409!2.01e-07!35;UBERON:0000922!2.07e-07!612;UBERON:0000464!3.01e-07!104;UBERON:0009854!3.35e-07!23;UBERON:0002368!3.43e-07!35;UBERON:0000080!4.01e-07!18;UBERON:0002120!4.01e-07!18;UBERON:0004875!4.01e-07!18;UBERON:0005721!4.01e-07!18;UBERON:0005754!4.01e-07!18;UBERON:0007297!4.01e-07!18;UBERON:0009773!4.22e-07!12;UBERON:0001231!4.22e-07!12;UBERON:0004810!4.22e-07!12;UBERON:0008947!4.90e-07!38;UBERON:0003258!4.90e-07!38;UBERON:0000949!5.41e-07!45;UBERON:0001049!5.64e-07!57;UBERON:0005068!5.64e-07!57;UBERON:0006241!5.64e-07!57;UBERON:0007135!5.64e-07!57;UBERON:0000160!5.79e-07!27;UBERON:0000065!8.16e-07!53;UBERON:0003101!9.29e-07!22;UBERON:0000079!9.29e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0002423;1.81e-15;25!UBERON:0005409;5.05e-14;22!UBERON:0005172;4.78e-12;52!UBERON:0005173;4.78e-12;52!UBERON:0000160;5.47e-12;17!UBERON:0004211;8.00e-12;10!UBERON:0009773;8.00e-12;10!UBERON:0001231;8.00e-12;10!UBERON:0004810;8.00e-12;10!UBERON:0000489;1.44e-10;29!UBERON:0002113;3.74e-10;24!UBERON:0011143;3.74e-10;24!UBERON:0006554;4.50e-10;30!UBERON:0001008;4.50e-10;30!UBERON:0006555;3.14e-09;15!UBERON:0004819;3.14e-09;15!UBERON:0001285;3.14e-09;15!UBERON:0007684;3.14e-09;15!UBERON:0002417;6.04e-09;58!UBERON:0000916;6.04e-09;58!UBERON:0002294;8.40e-09;7!UBERON:0001173;8.40e-09;7!UBERON:0005177;8.64e-09;99!UBERON:0002107;2.53e-08;19!UBERON:0006925;2.53e-08;19!UBERON:0004921;1.56e-07;33!UBERON:0000058;1.95e-07;10!UBERON:0002368;4.51e-07;33!UBERON:0002048;1.00e-06;22!UBERON:0000117;1.00e-06;22!UBERON:0000171;1.00e-06;22!UBERON:0000170;1.00e-06;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004921,1.69e-23,118;UBERON:0005177,2.81e-23,101;UBERON:0005172,2.78e-20,54;UBERON:0005173,2.78e-20,54;UBERON:0001007,3.67e-20,145;UBERON:0001555,3.67e-20,145;UBERON:0007026,3.67e-20,145;UBERON:0009569,2.31e-18,112;UBERON:0005911,2.18e-17,82;UBERON:0002417,2.53e-17,60;UBERON:0000916,2.53e-17,60;UBERON:0004119,8.57e-17,160;UBERON:0000925,8.57e-17,160;UBERON:0006595,8.57e-17,160;UBERON:0009497,1.82e-15,25;UBERON:0000015,1.82e-15,25;UBERON:0002423,1.82e-15,25;UBERON:0006235,1.82e-15,25;UBERON:0004161,1.82e-15,25;UBERON:0009856,1.58e-14,26;UBERON:0007499,1.21e-13,25;UBERON:0002100,1.60e-13,199;UBERON:0011216,2.12e-13,223;UBERON:0001008,4.57e-13,48;UBERON:0009854,6.05e-13,23;UBERON:0003929,8.05e-13,54;UBERON:0000489,2.56e-12,31;UBERON:0006554,3.57e-12,47;UBERON:0008835,4.58e-12,22;UBERON:0003894,4.58e-12,22;UBERON:0000160,5.63e-12,17;UBERON:0002113,5.85e-12,26;UBERON:0003918,5.85e-12,26;UBERON:0011143,5.85e-12,26;UBERON:0005095,5.85e-12,26;UBERON:0007687,5.85e-12,26;UBERON:0005409,6.59e-12,25;UBERON:0004810,8.31e-12,10;UBERON:0001041,3.02e-11,87;UBERON:0006555,4.05e-10,16;UBERON:0004819,4.05e-10,16;UBERON:0001046,4.06e-10,19;UBERON:0004211,3.23e-09,15;UBERON:0009773,3.23e-09,15;UBERON:0001231,3.23e-09,15;UBERON:0001285,3.23e-09,15;UBERON:0007684,3.23e-09,15;UBERON:0004208,3.23e-09,15;UBERON:0003104,5.90e-09,160;UBERON:0009142,5.90e-09,160;UBERON:0005153,1.16e-08,37;UBERON:0002107,2.55e-08,19;UBERON:0006925,2.55e-08,19;UBERON:0008836,2.55e-08,19;UBERON:0004111,4.27e-08,240;UBERON:0002530,8.12e-08,59;UBERON:0000949,3.30e-07,45;UBERON:0002368,4.50e-07,35;UBERON:0003064,5.79e-07,28;UBERON:0000025,7.27e-07,192 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,11.5494950155709,34.1922572306489,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,2.44522898393444,0.656804715599566,1.25937250101887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,3.20898734969396,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488124115096339,0,0,0.357198913136319,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773043412653187,0,0.573609190778008,0.487894824518382,0.132529768321485,0.348581828608555,0.414644220061482,1.00928340350251,0,0,0,0,0,0,0.946454400318751,0.505754070234305,0.964044119533928,0.661763836394364,0.435758888184812,1.66089433377768,1.75280700608214,0.196221465125346,2.30848294167834,0,0,0,0,111.544430643211,104.179684967828,107.523763016016,0,23.3678033231916,0,0,2.24803506515239,0,0,0.325808305310325,0,0,0,0,0.288732895522148,0,0,0.790204397959275,2.57545848628462,0,0,0,0.93733833986777,0,0,0.268675568108545,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.0510304687328,0.601519410909855,6.53775021444864,0,0,0,7.670393419426,16.0962054548227,3.13739907670742,2.92278449306521,2.63879072232189,0,0,0,0,0.541892875087706,1.00337954770971,8.15604073744123,26.5944322857192,3.80587083027703,0,0,0.512900250232778,0.328014645699706,0.325378394664303,27.7180321332373,0,0,0,0,0,0,0,0,0.275673144969061,0,0,0.255679882248303,0.178064071293475,0.165284915360978,0.384380134730212,0,0.708104465988849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0.202182481573316,0,0,0,0.243713489631284,0,0,0.141405431953713,0,0,0.66343897524122,0,0.578775534266688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.5025914516764,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,1.71528151186722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,40.4223567281755,0,0,0,0,0,0,0,1.9882952955326,0.140669416410513,0,0,0,0,1.10513566212459,16.3756286105279,0,1.35393286007176,0,24.4441915120729,23.2727527078292,0,16.5720921470048,0,0,4.84666373047609,0,0,1.30213880542617,6.55949999971468,2.17499872630438,0.455173793141999,4.06805840468426,5.67330436243047,1.03423011972439,0,0,0,0.964771509003264,4.5774520895125,1.10579259931225,5.6154047601174,0.219385397153973,0,0.139423744278603,0.538651809526579,0,0.922255617552241,0.987334088507493,0.651884231532048,0,0,0,0,0,0,0,0,0,0,0,9.70591096828924,7.99840759979824,17.3864277863747,0,2.98578579323551,20.7875276582847,29.329446956814,0,0,0,0.202203398942031,0,0.702793337176017,0,1.76098157038881,0,2.76209081994573,36.2972148145992,0,0,0.450970258243478,0.311064574191741,0,0,0,0,5.69219092059585,0,2.08271686002157,0,3.22119064347489,1.22308667769421,0,0,0,0,0,0,0,0.137041924646751,0,0.0633107959558787,3.51992488922645,5.53095859735583,5.33632486848381,0,11.9595046237908,0,111.708343608139,0.14405479798815,0,3.06402245001834,0,0,0,0,0.600420288709789,0,0,0,0,0,0.229160424011684,0,0.199679000498991,0,0,0.0671834724867263,0,12.8145544480199,19.3018796652698,16.5655875346145,17.7271320336506,12.1065802263141,0,0,0.408610218334727,1.28602518772015,2.06309154895851,1.24632101408756,0,0,0.121499113316049,0,8.11698785181741,5.14054963722981,0,0,1.15149118391667,0.714695326373367,0,0,0,0,0,0,0,0,0,93.7934295539728,120.581268910121,0.904980694530854,1.05786081394152,12.3182523276717,0,3.52398461473392,5.03053776318931,5.79934677486074,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.1251909307065,0.573409195690071,0.443716206147409,0.248385611765534,0,0,0,0,0.941063278792687,0.468334905806882,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.43324774124777,0.260994291965212,0,1.389134845943,0,0,1.85280868296583,0.657852148736121,0.530067437837643,1.3503982678964,0,3.58738126023125,0,2.43087964941906,0,0,0,0,0,0,19.8633395957109,0,0,0,0,0,3.21722867754722,0,0,0,0,0,0,0,0,0,0,0,12.008561224282,0,0,0.256916900385838,0,0,0,0,0.138314504928436,0,0,0,0,0,6.58496297056928,0,0,0,0.150420656698515,0,14.8487662134288,0.523813388962845,3.11166643269184,19.9605716393011,0,0,0,0,0,0.548257766857182,0,0,0.127762427639595,0.535701835878287,0.672567444437648,12.7462776889693,11.3831095675649,0.709618961301111,0.115233987555779,0,0.815636795721981,0.131545547125698,12.1739656110487,4.44925607568277,3.84616154967519,1.25692471932802,7.00680408284473,4.56579360254748,1.07963795609311,5.25526856675755,0.357382720883282,0,0,0,0,0,0,0,0.860454717640555,0,0,4.65725755210022,0.68732060563215,1.5510319283216,0,0.335566295393377,15.9984880792846,10.7287773984397,0,0.410651227424988,0,0.971421986118279,8.1878812211737,0,0,0,0,12.9828045467339,51.1664668255673,73.4360123293296,30.570624263499,1.96118657403124,12.49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| ||
|short_description=p1@GOLT1A | |||
}} | }} |
Latest revision as of 00:35, 20 September 2015
Short description: | p1@GOLT1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GOLT1A_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 67bp_to_ENST00000308302, NM_198447, uc001has.1, uc001hat.1_5end |
EntrezGene: | GOLT1A |
HGNC: | 24766 |
UniProt: | Q6ZVE7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.47e-19 | 253 |
kidney tubule cell | 8.31e-12 | 10 |
nephron tubule epithelial cell | 8.31e-12 | 10 |
kidney cell | 2.87e-11 | 17 |
kidney epithelial cell | 2.87e-11 | 17 |
epithelial cell of nephron | 3.23e-09 | 15 |
hepatocyte | 3.48e-09 | 12 |
endodermal cell | 1.30e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.27e-30 | 106 |
cell type cancer | 3.89e-21 | 143 |
adenocarcinoma | 3.41e-13 | 25 |
cancer | 1.57e-09 | 235 |
disease of cellular proliferation | 5.01e-09 | 239 |
disease of anatomical entity | 3.94e-07 | 39 |
gastrointestinal system cancer | 5.11e-07 | 14 |