FFCP PHASE1:Hg19::chr7:93551224..93551235,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:93551224..93551235,+
|short_description=p8@GNG11
|description=CAGE_peak_8_at_GNG11_5end
|association_with_transcript=208bp_to_NM_004126,uc003und.2_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2791 | |EntrezGene=2791 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4403 | |HGNC=4403 | ||
|TSSclassifier=strong | |||
|UniProt=P61952,Q53Y01 | |UniProt=P61952,Q53Y01 | ||
|association_with_transcript=208bp_to_NM_004126,uc003und.2_5end | |||
|cluster_id=chr7:93551224..93551235,+ | |||
|coexpression_cluster_id=C2907 | |||
|description=CAGE_peak_8_at_GNG11_5end | |||
|id=chr7:93551224..93551235,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.15e-26!180;CL:0000222!4.94e-23!119;CL:0000183!6.66e-20!59;CL:0000680!5.43e-19!57;CL:0000056!5.43e-19!57;CL:0000355!5.43e-19!57;CL:0000192!1.91e-18!42;CL:0000514!1.91e-18!42;CL:0000187!3.99e-18!54;CL:0000393!5.00e-17!60;CL:0000211!5.00e-17!60;CL:0000359!6.68e-16!32;CL:0002139!5.01e-13!24;CL:0000115!5.27e-12!35;CL:0000057!8.72e-11!75;CL:0000071!2.05e-10!18;CL:0002546!2.05e-10!18;CL:0002078!2.07e-10!44;CL:0000220!5.51e-08!246;CL:0002321!1.38e-07!248;CL:0000213!6.17e-07!57;CL:0000215!6.17e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.54e-17;32!CL:0002139;1.05e-16;24!CL:0000115;2.83e-14;36!CL:0000192;3.05e-14;43!CL:0000071;2.45e-13;18!CL:0000187;2.48e-09;55!CL:0002078;7.99e-09;45!CL:1000413;1.16e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,6.74e-24,121;CL:0000192,6.30e-20,43;CL:0000514,6.30e-20,43;CL:0000359,7.95e-18,32;CL:0000680,8.05e-18,58;CL:0000056,8.05e-18,58;CL:0000355,8.05e-18,58;CL:0002139,3.53e-17,24;CL:0000115,4.09e-17,36;CL:0000187,1.12e-16,55;CL:0002078,8.02e-14,45;CL:0000071,1.28e-13,18;CL:0002546,1.28e-13,18;CL:0000393,1.49e-13,61;CL:0000211,1.49e-13,61;CL:0000057,5.71e-10,76;CL:0000213,1.06e-08,58;CL:0000215,1.06e-08,58;CL:1000413,8.57e-08,9;CL:0002321,1.97e-07,250;CL:0000048,2.16e-07,427;CL:0000723,8.52e-07,433 | |||
|ontology_enrichment_development_v019=CL:0000514;3.05e-14;43!CL:0002546;2.45e-13;18!CL:0000355;2.81e-09;58!CL:0000222;4.23e-07;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!6.07e-34!110;UBERON:0001009!1.15e-32!113;UBERON:0002049!1.36e-30!79;UBERON:0007798!1.36e-30!79;UBERON:0000055!3.01e-25!69;UBERON:0001981!4.33e-23!60;UBERON:0007500!4.33e-23!60;UBERON:0004537!4.33e-23!60;UBERON:0006965!4.33e-23!60;UBERON:0004872!3.64e-22!84;UBERON:0000914!3.83e-20!83;UBERON:0002329!3.83e-20!83;UBERON:0003077!3.83e-20!83;UBERON:0003059!3.83e-20!83;UBERON:0007282!3.83e-20!83;UBERON:0009618!3.83e-20!83;UBERON:0007285!3.83e-20!83;UBERON:0000477!3.92e-20!286;UBERON:0003914!5.14e-20!118;UBERON:0004290!7.23e-20!70;UBERON:0001637!4.25e-19!42;UBERON:0003509!4.25e-19!42;UBERON:0004572!4.25e-19!42;UBERON:0002385!8.35e-18!63;UBERON:0001015!8.35e-18!63;UBERON:0000383!8.35e-18!63;UBERON:0001134!8.35e-18!61;UBERON:0002036!8.35e-18!61;UBERON:0003082!8.35e-18!61;UBERON:0005256!2.88e-15!143;UBERON:0000119!3.70e-15!312;UBERON:0000490!4.77e-15!138;UBERON:0004573!6.24e-15!33;UBERON:0004571!6.24e-15!33;UBERON:0000486!1.69e-14!82;UBERON:0000483!5.60e-14!309;UBERON:0004111!1.84e-13!241;UBERON:0000025!3.97e-13!194;UBERON:0000475!1.43e-11!365;UBERON:0002100!1.72e-11!216;UBERON:0000468!8.63e-11!659;UBERON:0000481!9.76e-11!347;UBERON:0000467!2.04e-10!625;UBERON:0001986!2.05e-10!18;UBERON:0004638!2.05e-10!18;UBERON:0004852!2.05e-10!18;UBERON:0000487!2.28e-10!22;UBERON:0000480!3.20e-10!626;UBERON:0006914!1.65e-09!25;UBERON:0003104!6.33e-09!238;UBERON:0009142!6.33e-09!238;UBERON:0000947!1.95e-08!21;UBERON:0010191!1.95e-08!21;UBERON:0000926!6.45e-08!448;UBERON:0004120!6.45e-08!448;UBERON:0006603!6.45e-08!448;UBERON:0002050!2.33e-07!605;UBERON:0005423!2.33e-07!605;UBERON:0000923!2.50e-07!604;UBERON:0005291!2.50e-07!604;UBERON:0006598!2.50e-07!604;UBERON:0002532!2.50e-07!604;UBERON:0000922!2.70e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;8.30e-16;42!UBERON:0003509;8.30e-16;42!UBERON:0004572;8.30e-16;42!UBERON:0007500;2.67e-15;56!UBERON:0001981;2.67e-15;56!UBERON:0004537;2.67e-15;56!UBERON:0002049;8.98e-15;75!UBERON:0007798;8.98e-15;75!UBERON:0004573;1.04e-14;33!UBERON:0004571;1.04e-14;33!UBERON:0000055;2.04e-14;65!UBERON:0000487;1.61e-13;22!UBERON:0004638;2.45e-13;18!UBERON:0001986;2.45e-13;18!UBERON:0004852;2.45e-13;18!UBERON:0006914;6.11e-12;25!UBERON:0003914;1.25e-11;74!UBERON:0004535;1.08e-10;109!UBERON:0001009;6.28e-10;112!UBERON:0000947;9.01e-09;21!UBERON:0010191;9.01e-09;21!UBERON:0000490;2.20e-08;33!UBERON:0003915;1.16e-07;9!UBERON:0004700;1.16e-07;9!UBERON:0001917;1.16e-07;9!UBERON:0003513;2.35e-07;7 | |||
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| ||
|short_description=p8@GNG11 | |||
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Latest revision as of 01:48, 20 September 2015
Short description: | p8@GNG11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_GNG11_5end |
Coexpression cluster: | C2907_mesenchymal_myxofibrosarcoma_serous_Smooth_Endothelial_leiomyoma_Fibroblast |
Association with transcript: | 208bp_to_NM_004126, uc003und.2_5end |
EntrezGene: | GNG11 |
HGNC: | 4403 |
UniProt: | P61952Q53Y01 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 6.74e-24 | 121 |
smooth muscle cell | 6.30e-20 | 43 |
smooth muscle myoblast | 6.30e-20 | 43 |
vascular associated smooth muscle cell | 7.95e-18 | 32 |
muscle precursor cell | 8.05e-18 | 58 |
myoblast | 8.05e-18 | 58 |
multi-potent skeletal muscle stem cell | 8.05e-18 | 58 |
endothelial cell of vascular tree | 3.53e-17 | 24 |
endothelial cell | 4.09e-17 | 36 |
muscle cell | 1.12e-16 | 55 |
meso-epithelial cell | 8.02e-14 | 45 |
blood vessel endothelial cell | 1.28e-13 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.28e-13 | 18 |
electrically responsive cell | 1.49e-13 | 61 |
electrically active cell | 1.49e-13 | 61 |
fibroblast | 5.71e-10 | 76 |
lining cell | 1.06e-08 | 58 |
barrier cell | 1.06e-08 | 58 |
endothelial cell of artery | 8.57e-08 | 9 |
embryonic cell | 1.97e-07 | 250 |
multi fate stem cell | 2.16e-07 | 427 |
somatic stem cell | 8.52e-07 | 433 |