FFCP PHASE1:Hg19::chr7:93551243..93551254,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2791 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4403 | |||
|TSSclassifier=strong | |||
|UniProt=P61952,Q53Y01 | |||
|association_with_transcript=227bp_to_NM_004126,uc003und.2_5end | |||
|cluster_id=chr7:93551243..93551254,+ | |||
|coexpression_cluster_id=C2907 | |||
|description=CAGE_peak_10_at_GNG11_5end | |||
|id=chr7:93551243..93551254,+ | |||
|ontology_enrichment_celltype=CL:0000222!1.55e-24!119;CL:0000055!4.02e-23!180;CL:0000680!3.90e-19!57;CL:0000056!3.90e-19!57;CL:0000355!3.90e-19!57;CL:0000183!4.60e-19!59;CL:0000192!1.15e-18!42;CL:0000514!1.15e-18!42;CL:0000187!3.63e-18!54;CL:0000359!1.66e-17!32;CL:0000393!4.52e-17!60;CL:0000211!4.52e-17!60;CL:0002139!4.84e-13!24;CL:0000115!3.55e-12!35;CL:0002078!4.07e-11!44;CL:0000071!9.55e-11!18;CL:0002546!9.55e-11!18;CL:0000220!7.99e-10!246;CL:0000057!8.26e-10!75;CL:0002321!1.46e-09!248;CL:0000213!6.64e-07!57;CL:0000215!6.64e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000359;5.89e-22;32!CL:0002139;7.69e-18;24!CL:0000192;2.00e-16;43!CL:0000115;1.60e-15;36!CL:0000071;1.10e-14;18!CL:0002078;9.08e-11;45!CL:0000187;4.11e-10;55!CL:1000413;2.78e-08;9!CL:0000393;4.71e-08;61!CL:0000211;4.71e-08;61!CL:0002539;3.72e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.35e-29,121;CL:0000192,7.22e-23,43;CL:0000514,7.22e-23,43;CL:0000359,1.12e-22,32;CL:0000680,2.34e-20,58;CL:0000056,2.34e-20,58;CL:0000355,2.34e-20,58;CL:0000187,5.64e-19,55;CL:0000115,1.18e-18,36;CL:0002139,1.49e-18,24;CL:0002078,1.63e-16,45;CL:0000393,1.08e-15,61;CL:0000211,1.08e-15,61;CL:0000071,3.73e-15,18;CL:0002546,3.73e-15,18;CL:0000213,8.75e-10,58;CL:0000215,8.75e-10,58;CL:0002321,8.86e-10,250;CL:1000413,1.84e-08,9;CL:0002539,4.59e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000514;2.00e-16;43!CL:0002546;1.10e-14;18!CL:0000355;4.57e-10;58!CL:0000222;6.73e-08;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;2.88e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.84e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0004535!2.00e-32!110;UBERON:0002049!3.28e-32!79;UBERON:0007798!3.28e-32!79;UBERON:0001009!1.33e-31!113;UBERON:0000055!1.48e-26!69;UBERON:0001981!8.95e-25!60;UBERON:0007500!8.95e-25!60;UBERON:0004537!8.95e-25!60;UBERON:0006965!8.95e-25!60;UBERON:0004872!3.35e-23!84;UBERON:0000477!2.18e-21!286;UBERON:0001637!1.77e-20!42;UBERON:0003509!1.77e-20!42;UBERON:0004572!1.77e-20!42;UBERON:0000914!2.79e-20!83;UBERON:0002329!2.79e-20!83;UBERON:0003077!2.79e-20!83;UBERON:0003059!2.79e-20!83;UBERON:0007282!2.79e-20!83;UBERON:0009618!2.79e-20!83;UBERON:0007285!2.79e-20!83;UBERON:0004290!5.04e-20!70;UBERON:0003914!1.15e-18!118;UBERON:0001134!9.79e-18!61;UBERON:0002036!9.79e-18!61;UBERON:0003082!9.79e-18!61;UBERON:0002385!1.25e-17!63;UBERON:0001015!1.25e-17!63;UBERON:0000383!1.25e-17!63;UBERON:0000119!7.16e-17!312;UBERON:0000490!5.22e-16!138;UBERON:0004573!9.59e-16!33;UBERON:0004571!9.59e-16!33;UBERON:0000483!1.32e-15!309;UBERON:0000486!7.15e-15!82;UBERON:0000475!1.20e-14!365;UBERON:0000468!3.27e-14!659;UBERON:0005256!4.12e-14!143;UBERON:0004111!5.14e-14!241;UBERON:0000025!5.50e-14!194;UBERON:0000467!1.18e-12!625;UBERON:0000480!1.88e-12!626;UBERON:0000481!4.00e-12!347;UBERON:0002100!1.60e-11!216;UBERON:0000487!3.25e-11!22;UBERON:0001986!9.55e-11!18;UBERON:0004638!9.55e-11!18;UBERON:0004852!9.55e-11!18;UBERON:0006914!1.97e-10!25;UBERON:0000922!4.41e-09!612;UBERON:0002050!7.56e-09!605;UBERON:0005423!7.56e-09!605;UBERON:0003104!8.06e-09!238;UBERON:0009142!8.06e-09!238;UBERON:0000923!8.98e-09!604;UBERON:0005291!8.98e-09!604;UBERON:0006598!8.98e-09!604;UBERON:0002532!8.98e-09!604;UBERON:0000947!1.45e-08!21;UBERON:0010191!1.45e-08!21;UBERON:0000926!4.01e-07!448;UBERON:0004120!4.01e-07!448;UBERON:0006603!4.01e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;3.04e-18;42!UBERON:0003509;3.04e-18;42!UBERON:0004572;3.04e-18;42!UBERON:0004573;2.88e-17;33!UBERON:0004571;2.88e-17;33!UBERON:0007500;5.29e-17;56!UBERON:0001981;5.29e-17;56!UBERON:0004537;5.29e-17;56!UBERON:0000487;9.54e-16;22!UBERON:0002049;4.45e-15;75!UBERON:0007798;4.45e-15;75!UBERON:0004638;1.10e-14;18!UBERON:0001986;1.10e-14;18!UBERON:0004852;1.10e-14;18!UBERON:0000055;1.40e-14;65!UBERON:0006914;3.65e-14;25!UBERON:0003914;1.05e-13;74!UBERON:0004535;7.90e-11;109!UBERON:0001009;6.25e-10;112!UBERON:0000490;1.57e-09;33!UBERON:0000947;5.79e-09;21!UBERON:0010191;5.79e-09;21!UBERON:0003915;2.78e-08;9!UBERON:0004700;2.78e-08;9!UBERON:0001917;2.78e-08;9!UBERON:0000025;3.43e-08;93!UBERON:0003513;4.26e-08;7!UBERON:0004237;3.72e-07;10!UBERON:0004695;3.72e-07;10!UBERON:0002111;3.72e-07;10!UBERON:0004178;3.72e-07;10!UBERON:0001135;4.61e-07;15!UBERON:0000992;6.76e-07;13 | |||
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| |||
|short_description=p10@GNG11 | |||
}} |
Latest revision as of 01:49, 20 September 2015
Short description: | p10@GNG11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_GNG11_5end |
Coexpression cluster: | C2907_mesenchymal_myxofibrosarcoma_serous_Smooth_Endothelial_leiomyoma_Fibroblast |
Association with transcript: | 227bp_to_NM_004126, uc003und.2_5end |
EntrezGene: | GNG11 |
HGNC: | 4403 |
UniProt: | P61952Q53Y01 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.35e-29 | 121 |
smooth muscle cell | 7.22e-23 | 43 |
smooth muscle myoblast | 7.22e-23 | 43 |
vascular associated smooth muscle cell | 1.12e-22 | 32 |
muscle precursor cell | 2.34e-20 | 58 |
myoblast | 2.34e-20 | 58 |
multi-potent skeletal muscle stem cell | 2.34e-20 | 58 |
muscle cell | 5.64e-19 | 55 |
endothelial cell | 1.18e-18 | 36 |
endothelial cell of vascular tree | 1.49e-18 | 24 |
meso-epithelial cell | 1.63e-16 | 45 |
electrically responsive cell | 1.08e-15 | 61 |
electrically active cell | 1.08e-15 | 61 |
blood vessel endothelial cell | 3.73e-15 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.73e-15 | 18 |
lining cell | 8.75e-10 | 58 |
barrier cell | 8.75e-10 | 58 |
embryonic cell | 8.86e-10 | 250 |
endothelial cell of artery | 1.84e-08 | 9 |
aortic smooth muscle cell | 4.59e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.84e-07 | 14 |