FFCP PHASE1:Hg19::chr2:216245602..216245652,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2335 | |EntrezGene=2335 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3778 | |HGNC=3778 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=399bp_to_ENST00000474036_5end | |association_with_transcript=399bp_to_ENST00000474036_5end | ||
|cluster_id=chr2:216245602..216245652,- | |||
|coexpression_cluster_id=C79 | |||
|description=CAGE_peak_33_at_FN1_5end | |description=CAGE_peak_33_at_FN1_5end | ||
|id=chr2:216245602..216245652,- | |id=chr2:216245602..216245652,- | ||
|ontology_enrichment_celltype=CL:0000055!9.39e-43!180;CL:0000057!1.74e-26!75;CL:0002371!1.24e-19!591;CL:0000680!1.89e-18!57;CL:0000056!1.89e-18!57;CL:0000355!1.89e-18!57;CL:0000183!4.99e-18!59;CL:0000187!4.04e-17!54;CL:0000144!4.14e-17!625;CL:0000393!1.42e-14!60;CL:0000211!1.42e-14!60;CL:0000220!3.62e-12!246;CL:0002321!6.63e-12!248;CL:0000222!6.98e-12!119;CL:0000192!9.27e-12!42;CL:0000514!9.27e-12!42;CL:0000548!2.02e-11!679;CL:0000004!2.02e-11!679;CL:0000255!2.02e-11!679;CL:0000012!7.36e-11!682;CL:0002620!7.93e-11!23;CL:0000048!1.37e-10!430;CL:0000723!4.79e-10!436;CL:0000034!1.27e-09!444;CL:0000359!1.83e-09!32;CL:0002494!2.44e-08!16;CL:0002334!2.53e-07!12;CL:0000499!2.98e-07!27 | |ontology_enrichment_celltype=CL:0000055!9.39e-43!180;CL:0000057!1.74e-26!75;CL:0002371!1.24e-19!591;CL:0000680!1.89e-18!57;CL:0000056!1.89e-18!57;CL:0000355!1.89e-18!57;CL:0000183!4.99e-18!59;CL:0000187!4.04e-17!54;CL:0000144!4.14e-17!625;CL:0000393!1.42e-14!60;CL:0000211!1.42e-14!60;CL:0000220!3.62e-12!246;CL:0002321!6.63e-12!248;CL:0000222!6.98e-12!119;CL:0000192!9.27e-12!42;CL:0000514!9.27e-12!42;CL:0000548!2.02e-11!679;CL:0000004!2.02e-11!679;CL:0000255!2.02e-11!679;CL:0000012!7.36e-11!682;CL:0002620!7.93e-11!23;CL:0000048!1.37e-10!430;CL:0000723!4.79e-10!436;CL:0000034!1.27e-09!444;CL:0000359!1.83e-09!32;CL:0002494!2.44e-08!16;CL:0002334!2.53e-07!12;CL:0000499!2.98e-07!27 | ||
|ontology_enrichment_celltype_v019=CL:0000134;3.63e-14;55!CL:0000723;5.30e-13;61!CL:0000057;6.89e-12;73!CL:0002620;8.09e-12;23!CL:0000048;8.38e-12;58!CL:0000187;2.77e-11;55!CL:0002320;1.92e-10;188!CL:0000349;5.48e-10;19!CL:0000359;7.06e-10;32!CL:0002494;9.74e-10;16!CL:0000034;1.14e-09;69!CL:0000192;1.95e-09;43!CL:0000393;1.52e-08;61!CL:0000211;1.52e-08;61!CL:0002334;2.10e-08;12!CL:0000499;2.82e-08;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.13e-29,76;CL:0000048,1.09e-21,427;CL:0000723,6.59e-21,433;CL:0000680,9.30e-21,58;CL:0000056,9.30e-21,58;CL:0000355,9.30e-21,58;CL:0000034,5.11e-20,441;CL:0000187,3.38e-19,55;CL:0000393,1.72e-15,61;CL:0000211,1.72e-15,61;CL:0000192,6.13e-13,43;CL:0000514,6.13e-13,43;CL:0002620,7.91e-12,23;CL:0000359,2.61e-10,32;CL:0000349,4.38e-10,19;CL:0002320,4.46e-10,361;CL:0002494,1.38e-09,16;CL:0000222,2.25e-09,121;CL:0000499,2.15e-08,28;CL:0002334,2.19e-08,12;CL:0000134,2.19e-08,354;CL:0002321,4.55e-08,250;CL:0000219,4.44e-07,386 | |||
|ontology_enrichment_development_v019=CL:0000355;2.21e-11;58!CL:0000514;1.95e-09;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;9.29e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,8.24e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!7.40e-22!83;UBERON:0002329!7.40e-22!83;UBERON:0003077!7.40e-22!83;UBERON:0003059!7.40e-22!83;UBERON:0007282!7.40e-22!83;UBERON:0009618!7.40e-22!83;UBERON:0007285!7.40e-22!83;UBERON:0005256!2.36e-20!143;UBERON:0004290!4.67e-20!70;UBERON:0000486!1.02e-19!82;UBERON:0001134!1.06e-16!61;UBERON:0002036!1.06e-16!61;UBERON:0003082!1.06e-16!61;UBERON:0002385!1.58e-16!63;UBERON:0001015!1.58e-16!63;UBERON:0000383!1.58e-16!63;UBERON:0000490!9.68e-14!138;UBERON:0003914!1.04e-12!118;UBERON:0004872!6.15e-12!84;UBERON:0002100!1.21e-11!216;UBERON:0002049!6.37e-11!79;UBERON:0007798!6.37e-11!79;UBERON:0001637!2.63e-10!42;UBERON:0003509!2.63e-10!42;UBERON:0004572!2.63e-10!42;UBERON:0002199!8.13e-10!45;UBERON:0002416!8.13e-10!45;UBERON:0004535!9.05e-10!110;UBERON:0001009!1.90e-09!113;UBERON:0003102!2.60e-09!95;UBERON:0002097!3.39e-09!40;UBERON:0000119!1.02e-08!312;UBERON:0000483!3.07e-08!309;UBERON:0000468!3.10e-08!659;UBERON:0000475!3.81e-08!365;UBERON:0000055!5.01e-08!69;UBERON:0001981!5.61e-08!60;UBERON:0007500!5.61e-08!60;UBERON:0004537!5.61e-08!60;UBERON:0006965!5.61e-08!60;UBERON:0004573!1.37e-07!33;UBERON:0004571!1.37e-07!33;UBERON:0004923!2.32e-07!57;UBERON:0003104!4.37e-07!238;UBERON:0009142!4.37e-07!238;UBERON:0005631!5.18e-07!14;UBERON:0000158!5.18e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0002384;2.09e-09;198!UBERON:0002097;1.08e-07;41!UBERON:0001637;1.57e-07;42!UBERON:0003509;1.57e-07;42!UBERON:0004572;1.57e-07;42!UBERON:0000478;2.39e-07;24!UBERON:0002199;2.67e-07;46!UBERON:0002416;2.67e-07;46!UBERON:0002385;2.88e-07;31!UBERON:0001015;2.88e-07;31!UBERON:0000383;2.88e-07;31 | |||
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| ||
|short_description=p33@FN1 | |short_description=p33@FN1 | ||
}} | }} |
Latest revision as of 02:23, 20 September 2015
Short description: | p33@FN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_33_at_FN1_5end |
Coexpression cluster: | C79_chorionic_Chondrocyte_Cardiac_Smooth_Fibroblast_Preadipocyte_Mesenchymal |
Association with transcript: | 399bp_to_ENST00000474036_5end |
EntrezGene: | FN1 |
HGNC: | 3778 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.13e-29 | 76 |
multi fate stem cell | 1.09e-21 | 427 |
somatic stem cell | 6.59e-21 | 433 |
muscle precursor cell | 9.30e-21 | 58 |
myoblast | 9.30e-21 | 58 |
multi-potent skeletal muscle stem cell | 9.30e-21 | 58 |
stem cell | 5.11e-20 | 441 |
muscle cell | 3.38e-19 | 55 |
electrically responsive cell | 1.72e-15 | 61 |
electrically active cell | 1.72e-15 | 61 |
smooth muscle cell | 6.13e-13 | 43 |
smooth muscle myoblast | 6.13e-13 | 43 |
skin fibroblast | 7.91e-12 | 23 |
vascular associated smooth muscle cell | 2.61e-10 | 32 |
extraembryonic cell | 4.38e-10 | 19 |
connective tissue cell | 4.46e-10 | 361 |
cardiocyte | 1.38e-09 | 16 |
mesodermal cell | 2.25e-09 | 121 |
stromal cell | 2.15e-08 | 28 |
preadipocyte | 2.19e-08 | 12 |
mesenchymal cell | 2.19e-08 | 354 |
embryonic cell | 4.55e-08 | 250 |
motile cell | 4.44e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 8.24e-07 | 14 |