FFCP PHASE1:Hg19::chr3:124606225..124606243,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3693 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6160 | |||
|TSSclassifier=strong | |||
|UniProt=P18084 | |||
|association_with_transcript=-81bp_to_ENST00000296181,NM_002213,uc003eho.2_5end | |||
|cluster_id=chr3:124606225..124606243,- | |||
|coexpression_cluster_id=C2716 | |||
|description=CAGE_peak_6_at_ITGB5_5end | |||
|id=chr3:124606225..124606243,- | |||
|ontology_enrichment_celltype=CL:0000055!6.98e-26!180;CL:0000057!4.41e-15!75;CL:0000680!9.07e-10!57;CL:0000056!9.07e-10!57;CL:0000355!9.07e-10!57;CL:0000183!1.18e-09!59;CL:0000222!1.44e-09!119;CL:0002321!2.51e-09!248;CL:0000136!3.11e-09!15;CL:0000220!3.48e-09!246;CL:0000192!1.09e-08!42;CL:0000514!1.09e-08!42;CL:0000187!1.40e-08!54;CL:0000359!6.14e-08!32;CL:0000393!1.01e-07!60;CL:0000211!1.01e-07!60;CL:0002334!2.21e-07!12;CL:0000548!7.31e-07!679;CL:0000004!7.31e-07!679;CL:0000255!7.31e-07!679 | |||
|ontology_enrichment_celltype_v019=CL:0000136;1.79e-09;13!CL:0000134;2.10e-09;55!CL:0000048;6.59e-09;58!CL:0000359;1.23e-08;32!CL:0002334;3.41e-08;12!CL:0000349;5.96e-08;19!CL:0000723;7.99e-08;61!CL:0000192;1.07e-07;43!CL:0000034;7.60e-07;69!CL:0002320;9.12e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.80e-15,76;CL:0000136,2.76e-10,15;CL:0000680,5.28e-10,58;CL:0000056,5.28e-10,58;CL:0000355,5.28e-10,58;CL:0000192,1.31e-09,43;CL:0000514,1.31e-09,43;CL:0000359,4.92e-09,32;CL:0000187,1.04e-08,55;CL:0002334,3.49e-08,12;CL:0000393,3.89e-08,61;CL:0000211,3.89e-08,61;CL:0000349,6.62e-08,19;CL:0000048,1.62e-07,427;CL:0000723,2.36e-07,433;CL:0000034,2.77e-07,441;CL:0000222,3.93e-07,121 | |||
|ontology_enrichment_development_v019=CL:0000514;1.07e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!2.54e-16!118;UBERON:0000468!6.26e-16!659;UBERON:0002100!1.53e-15!216;UBERON:0005256!3.53e-14!143;UBERON:0004872!1.31e-13!84;UBERON:0000475!1.76e-13!365;UBERON:0000467!2.02e-12!625;UBERON:0000480!2.09e-12!626;UBERON:0000119!3.41e-11!312;UBERON:0000483!6.12e-11!309;UBERON:0000486!7.99e-11!82;UBERON:0003104!1.02e-10!238;UBERON:0009142!1.02e-10!238;UBERON:0000490!1.90e-10!138;UBERON:0000926!4.75e-10!448;UBERON:0004120!4.75e-10!448;UBERON:0006603!4.75e-10!448;UBERON:0000914!7.77e-10!83;UBERON:0002329!7.77e-10!83;UBERON:0003077!7.77e-10!83;UBERON:0003059!7.77e-10!83;UBERON:0007282!7.77e-10!83;UBERON:0009618!7.77e-10!83;UBERON:0007285!7.77e-10!83;UBERON:0001048!8.96e-10!168;UBERON:0001637!9.86e-10!42;UBERON:0003509!9.86e-10!42;UBERON:0004572!9.86e-10!42;UBERON:0004290!1.20e-09!70;UBERON:0002049!1.71e-09!79;UBERON:0007798!1.71e-09!79;UBERON:0000477!2.09e-09!286;UBERON:0001981!3.28e-09!60;UBERON:0007500!3.28e-09!60;UBERON:0004537!3.28e-09!60;UBERON:0006965!3.28e-09!60;UBERON:0000055!3.69e-09!69;UBERON:0000481!4.93e-09!347;UBERON:0004573!8.26e-09!33;UBERON:0004571!8.26e-09!33;UBERON:0001009!1.50e-08!113;UBERON:0001134!2.23e-08!61;UBERON:0002036!2.23e-08!61;UBERON:0003082!2.23e-08!61;UBERON:0004535!2.33e-08!110;UBERON:0002385!3.09e-08!63;UBERON:0001015!3.09e-08!63;UBERON:0000383!3.09e-08!63;UBERON:0000922!3.68e-08!612;UBERON:0004111!8.33e-08!241;UBERON:0000923!1.06e-07!604;UBERON:0005291!1.06e-07!604;UBERON:0006598!1.06e-07!604;UBERON:0002532!1.06e-07!604;UBERON:0002050!1.09e-07!605;UBERON:0005423!1.09e-07!605;UBERON:0003102!3.34e-07!95;UBERON:0001013!3.88e-07!14;UBERON:0002199!4.26e-07!45;UBERON:0002416!4.26e-07!45;UBERON:0004923!4.92e-07!57;UBERON:0009569!5.82e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;7.39e-09;33!UBERON:0004571;7.39e-09;33!UBERON:0001637;5.12e-08;42!UBERON:0003509;5.12e-08;42!UBERON:0004572;5.12e-08;42!UBERON:0001013;9.39e-08;14!UBERON:0002384;8.33e-07;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,1.12e-14,117;UBERON:0002100,2.20e-13,199;UBERON:0005256,2.94e-13,122;UBERON:0004872,3.78e-12,83;UBERON:0007503,3.14e-11,78;UBERON:0000486,6.67e-11,83;UBERON:0003104,1.95e-10,160;UBERON:0009142,1.95e-10,160;UBERON:0001637,3.10e-10,42;UBERON:0003509,3.10e-10,42;UBERON:0004572,3.10e-10,42;UBERON:0000490,8.38e-10,148;UBERON:0002329,9.88e-10,71;UBERON:0003059,9.88e-10,71;UBERON:0007282,9.88e-10,71;UBERON:0004290,9.88e-10,71;UBERON:0009618,9.88e-10,71;UBERON:0007524,1.03e-09,73;UBERON:0004573,1.69e-09,33;UBERON:0004571,1.69e-09,33;UBERON:0003077,2.45e-09,72;UBERON:0007285,2.45e-09,72;UBERON:0001134,1.27e-08,62;UBERON:0002036,1.27e-08,62;UBERON:0003082,1.27e-08,62;UBERON:0002385,3.33e-08,64;UBERON:0001015,3.33e-08,64;UBERON:0000383,3.33e-08,64;UBERON:0007500,4.23e-08,59;UBERON:0001981,4.23e-08,59;UBERON:0004537,4.23e-08,59;UBERON:0006965,4.23e-08,59;UBERON:0001013,6.62e-08,14;UBERON:0002049,1.40e-07,78;UBERON:0007798,1.40e-07,78;UBERON:0000055,2.07e-07,68;UBERON:0001048,3.78e-07,160;UBERON:0002199,5.05e-07,46;UBERON:0002416,5.05e-07,46;UBERON:0001009,5.30e-07,112;UBERON:0004535,5.70e-07,109;UBERON:0000119,9.71e-07,309 | |||
|phase1_expression=8.3572054464456,13.9165340529139,8.17535543756633,16.0117277365009,7.59833860526389,12.2127393374052,5.06599756336621,9.47579810140246,3.13422753839806,2.7030733015166,3.48900583986214,3.05817920982241,7.64924236862515,0.37129905888014,1.98838425436749,3.36162573225888,1.20538905604795,2.19093027116212,1.46379839637152,3.0780264519197,4.08001382488506,1.56727360739044,1.43117993565528,1.91624195102038,2.13422487311165,0,0,0,0,0,0.154816123316076,0.919421224478927,0.30120591877825,1.84877005083394,0,0,0,0,0,0,0.671746422719773,0.647787332037959,0.77272670290256,0.145398238779565,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,4.02420515822182,2.81297636055767,1.44575660953827,3.00802746381534,4.05570253090306,3.1811437882044,5.35298357332899,0.850813354476611,0.886917589850256,2.0202000709419,0.72038491523742,1.09288586487763,1.48313777113772,0.324547393654683,0,0.26591592103773,0,0,0,1.19257444420023,2.58070378531837,1.73570250803797,1.13061588384802,5.45349267072878,0.825354125820202,1.04497483268405,2.06733407335463,1.77883131343355,0.66944122552934,0.805658634218294,2.28081631715554,0.976248230192678,0.735326160691737,1.62028389576352,0.714397826272638,0.898117490504679,0.563057402416611,0,2.84779697870439,1.28241220751285,0,0,1.3082821564276,5.96366342034382,3.41902381494365,3.17782033951725,8.89193524321323,3.19201543978521,2.24271040056923,2.1349799145941,6.41335625884616,2.17847724779836,0.538842688278752,1.9615428373615,1.21085942115945,1.15235184896,0.937285727335186,2.49728061464256,1.71141546463335,2.09228152772521,1.29177948508141,1.45685649931318,0.98315564691574,1.22492502752936,1.22834317311768,1.65321249881225,3.56400857184616,0.989067717114227,6.37112953356618,9.3420358436111,0.841680569770331,1.25118519871964,0.831192346452549,2.63386572528503,2.45190236639216,7.81237906314303,2.7223723958405,2.33206526395521,3.41691822109708,1.90738711043606,5.40163972951924,1.95799805553034,3.34932702059318,3.16398655763703,9.62025093775217,3.89748020644795,1.51460264546469,2.57739716198438,3.39456719319505,6.03516307278244,2.41805035746337,0.67824236924195,1.54608682530637,3.27295344709002,2.86804595389004,1.82960559194393,1.32529768321485,1.51052125730374,1.65857688024593,1.26160425437814,0.72995471815166,9.38697193978896,11.5783368874719,1.38134921352481,1.39310378409594,0.721879481669586,2.36613600079688,1.34867752062481,2.16909926895134,2.53676137284506,1.96091499683166,2.13543557199987,2.96628877952362,2.15843611637881,1.92373578473195,2.21446636387394,1.40241773803446,4.5273141246454,5.88034845542168,5.07020139287323,1.96565443335525,2.95394953340702,0,0.122988438543114,4.63233087806019,3.51200913307602,1.1240175325762,1.20634766893957,0.555530670951178,1.3032332212413,4.15973914111831,4.3299402607582,1.04337364477569,5.51820862908362,0.577465791044295,0.462985512576611,0.570762456703795,3.95102198979638,1.71697232418975,1.47730203652438,1.63802985597466,2.82399208348584,0.93733833986777,1.84780341018745,0.567100388969546,1.70161193135412,0.871901815541886,5.36735750831296,0,0,0.207328115540772,0.288239906833923,0,0.63497894292169,0.763976851116555,0,5.13217338068116,0.719792448923265,0.901029173531752,0.285826432630578,1.12131084345361,2.1798003441664,1.6134422880609,3.61960804121778,3.57656445851882,2.535908257668,6.64845291462176,3.12022310734098,2.31486636835928,1.41849132023278,2.39779961114489,1.00084595560703,1.62786481617433,1.64648067356154,2.60588947434988,1.06617584622764,3.16780749173372,7.83742380354924,6.10073421020206,3.499054691372,1.2162378064119,1.50677127429638,2.10833939483032,4.0736225433569,8.04033550838797,7.13184525203592,4.77778312003011,4.31500277355805,7.87868238255541,0,0,0,0,2.28685161800217,0,0,1.00509759200609,0,0,0,0,1.34960640891054,0.500170521059677,1.35632511849868,2.49565033836969,1.96271887676878,1.73472656537328,3.5142424497814,7.82459859292069,15.9185252839189,6.2083842775503,0.664225598535437,2.94990669666725,0.955719759148911,2.15381273209015,2.05886054286514,0,0.215714200818617,0,1.5156378572313,9.98612637062982,6.35019615992329,5.70647957983187,9.821566290436,9.82310330515758,5.63812256725084,9.72243773226737,11.4206284011961,20.7785293022987,3.23840356985577,4.43904313282818,2.29956036838666,3.63478100428535,3.48631135379878,0.362578348774867,6.21570057940183,1.10497186723076,1.37777337797528,2.73136752010076,2.22911505431021,1.35359883872224,0.385076685522074,3.13739907670742,4.38417673959782,0.633309773357254,6.8240030442538,3.91215522135986,2.80690690932781,0,3.25135725052623,2.00675909541941,1.27438136522519,0.831076008928724,2.0148727924996,0,0,0.769350375349168,1.31205858279882,0.650756789328606,2.16386124460217,2.7470839445503,2.55779449753823,0.574265537996172,1.30012049207304,6.42735719376638,0.773365746336976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| |||
|short_description=p6@ITGB5 | |||
}} |
Latest revision as of 02:42, 20 September 2015
Short description: | p6@ITGB5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ITGB5_5end |
Coexpression cluster: | C2716_Osteoblast_leiomyoma_Preadipocyte_Adipocyte_mesenchymal_Smooth_Mesothelial |
Association with transcript: | -81bp_to_ENST00000296181, NM_002213, uc003eho.2_5end |
EntrezGene: | ITGB5 |
HGNC: | 6160 |
UniProt: | P18084 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.80e-15 | 76 |
fat cell | 2.76e-10 | 15 |
muscle precursor cell | 5.28e-10 | 58 |
myoblast | 5.28e-10 | 58 |
multi-potent skeletal muscle stem cell | 5.28e-10 | 58 |
smooth muscle cell | 1.31e-09 | 43 |
smooth muscle myoblast | 1.31e-09 | 43 |
vascular associated smooth muscle cell | 4.92e-09 | 32 |
muscle cell | 1.04e-08 | 55 |
preadipocyte | 3.49e-08 | 12 |
electrically responsive cell | 3.89e-08 | 61 |
electrically active cell | 3.89e-08 | 61 |
extraembryonic cell | 6.62e-08 | 19 |
multi fate stem cell | 1.62e-07 | 427 |
somatic stem cell | 2.36e-07 | 433 |
stem cell | 2.77e-07 | 441 |
mesodermal cell | 3.93e-07 | 121 |