FFCP PHASE1:Hg19::chr19:56652686..56652701,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55311 | |EntrezGene=55311 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16052 | |HGNC=16052 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N0Y2 | |UniProt=Q8N0Y2 | ||
|association_with_transcript=130bp_to_ENST00000337080,uc002qmm.2,uc002qmn.1_5end | |association_with_transcript=130bp_to_ENST00000337080,uc002qmm.2,uc002qmn.1_5end | ||
|cluster_id=chr19:56652686..56652701,+ | |||
|description=CAGE_peak_3_at_ZNF444_5end | |description=CAGE_peak_3_at_ZNF444_5end | ||
|id=chr19:56652686..56652701,+ | |id=chr19:56652686..56652701,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!2.23e-14!312;UBERON:0000483!7.82e-14!309;UBERON:0000025!2.60e-13!194;UBERON:0000477!5.20e-12!286;UBERON:0004111!1.49e-11!241;UBERON:0000481!1.90e-11!347;UBERON:0002346!3.13e-11!90;UBERON:0003075!5.77e-11!86;UBERON:0007284!5.77e-11!86;UBERON:0002616!1.94e-10!59;UBERON:0001049!2.21e-10!57;UBERON:0005068!2.21e-10!57;UBERON:0006241!2.21e-10!57;UBERON:0007135!2.21e-10!57;UBERON:0000475!6.19e-10!365;UBERON:0003056!6.37e-10!61;UBERON:0005743!1.18e-09!86;UBERON:0001017!1.68e-09!82;UBERON:0000955!2.29e-09!69;UBERON:0006238!2.29e-09!69;UBERON:0000073!8.24e-09!94;UBERON:0001016!8.24e-09!94;UBERON:0000064!3.52e-08!219;UBERON:0003080!8.76e-08!42;UBERON:0000153!1.16e-07!129;UBERON:0007811!1.16e-07!129;UBERON:0002780!2.17e-07!41;UBERON:0001890!2.17e-07!41;UBERON:0006240!2.17e-07!41;UBERON:0000033!3.27e-07!123 | |ontology_enrichment_uberon=UBERON:0000119!2.23e-14!312;UBERON:0000483!7.82e-14!309;UBERON:0000025!2.60e-13!194;UBERON:0000477!5.20e-12!286;UBERON:0004111!1.49e-11!241;UBERON:0000481!1.90e-11!347;UBERON:0002346!3.13e-11!90;UBERON:0003075!5.77e-11!86;UBERON:0007284!5.77e-11!86;UBERON:0002616!1.94e-10!59;UBERON:0001049!2.21e-10!57;UBERON:0005068!2.21e-10!57;UBERON:0006241!2.21e-10!57;UBERON:0007135!2.21e-10!57;UBERON:0000475!6.19e-10!365;UBERON:0003056!6.37e-10!61;UBERON:0005743!1.18e-09!86;UBERON:0001017!1.68e-09!82;UBERON:0000955!2.29e-09!69;UBERON:0006238!2.29e-09!69;UBERON:0000073!8.24e-09!94;UBERON:0001016!8.24e-09!94;UBERON:0000064!3.52e-08!219;UBERON:0003080!8.76e-08!42;UBERON:0000153!1.16e-07!129;UBERON:0007811!1.16e-07!129;UBERON:0002780!2.17e-07!41;UBERON:0001890!2.17e-07!41;UBERON:0006240!2.17e-07!41;UBERON:0000033!3.27e-07!123 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000025,6.68e-12,192;UBERON:0002346,2.14e-11,86;UBERON:0010314,3.09e-11,132;UBERON:0003075,3.79e-11,82;UBERON:0007284,3.79e-11,82;UBERON:0000119,9.65e-11,309;UBERON:0000483,2.22e-10,306;UBERON:0004111,2.73e-10,240;UBERON:0000073,4.06e-10,53;UBERON:0002616,4.06e-10,53;UBERON:0001049,7.86e-10,56;UBERON:0005068,7.86e-10,56;UBERON:0006241,7.86e-10,56;UBERON:0007135,7.86e-10,56;UBERON:0003056,9.29e-10,61;UBERON:0001017,1.19e-08,81;UBERON:0010371,4.80e-08,104;UBERON:0000955,7.69e-08,68;UBERON:0006238,7.69e-08,68;UBERON:0002780,1.10e-07,41;UBERON:0001890,1.10e-07,41;UBERON:0003080,1.10e-07,41;UBERON:0006240,1.10e-07,41;UBERON:0001016,1.24e-07,89;UBERON:0001893,4.34e-07,34 | |||
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| ||
|short_description=p3@ZNF444 | |short_description=p3@ZNF444 | ||
}} | }} |
Latest revision as of 03:39, 20 September 2015
Short description: | p3@ZNF444 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ZNF444_5end |
Coexpression cluster: | NA |
Association with transcript: | 130bp_to_ENST00000337080, uc002qmm.2, uc002qmn.1_5end |
EntrezGene: | ZNF444 |
HGNC: | 16052 |
UniProt: | Q8N0Y2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tube | 6.68e-12 | 192 |
neurectoderm | 2.14e-11 | 86 |
structure with developmental contribution from neural crest | 3.09e-11 | 132 |
neural plate | 3.79e-11 | 82 |
presumptive neural plate | 3.79e-11 | 82 |
cell layer | 9.65e-11 | 309 |
epithelium | 2.22e-10 | 306 |
anatomical conduit | 2.73e-10 | 240 |
regional part of nervous system | 4.06e-10 | 53 |
regional part of brain | 4.06e-10 | 53 |
neural tube | 7.86e-10 | 56 |
neural rod | 7.86e-10 | 56 |
future spinal cord | 7.86e-10 | 56 |
neural keel | 7.86e-10 | 56 |
pre-chordal neural plate | 9.29e-10 | 61 |
central nervous system | 1.19e-08 | 81 |
ecto-epithelium | 4.80e-08 | 104 |
brain | 7.69e-08 | 68 |
future brain | 7.69e-08 | 68 |
regional part of forebrain | 1.10e-07 | 41 |
forebrain | 1.10e-07 | 41 |
anterior neural tube | 1.10e-07 | 41 |
future forebrain | 1.10e-07 | 41 |
nervous system | 1.24e-07 | 89 |
telencephalon | 4.34e-07 | 34 |