FFCP PHASE1:Hg19::chr3:125803105..125803173,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54946 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=31046 | |||
|TSSclassifier=strong | |||
|UniProt=Q96GZ6,D3DNA7 | |||
|association_with_transcript=0bp_to_ENST00000315891,ENST00000346785,NM_001008485,NM_001008486,NM_017836,uc003eij.2,uc003eik.2,uc003eil.2,uc010hsd.1_5end | |||
|cluster_id=chr3:125803105..125803173,- | |||
|description=CAGE_peak_2_at_SLC41A3_5end | |||
|id=chr3:125803105..125803173,- | |||
|ontology_enrichment_celltype=CL:0000791!8.37e-08!18;CL:0000789!8.37e-08!18;CL:0002420!8.37e-08!18;CL:0002419!8.37e-08!18;CL:0000790!8.37e-08!18 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.32e-08;18!CL:0000789;2.32e-08;18!CL:0002419;2.32e-08;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.46e-08,18;CL:0000789,2.46e-08,18;CL:0002420,2.46e-08,18;CL:0002419,2.46e-08,18;CL:0000790,2.46e-08,18 | |||
|ontology_enrichment_development_v019=CL:0000790;2.32e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.18e-14!94;UBERON:0001016!2.18e-14!94;UBERON:0005743!1.69e-13!86;UBERON:0001017!5.22e-13!82;UBERON:0002346!5.46e-12!90;UBERON:0001049!1.69e-11!57;UBERON:0005068!1.69e-11!57;UBERON:0006241!1.69e-11!57;UBERON:0007135!1.69e-11!57;UBERON:0000955!4.36e-11!69;UBERON:0006238!4.36e-11!69;UBERON:0003075!1.65e-10!86;UBERON:0007284!1.65e-10!86;UBERON:0002616!1.75e-10!59;UBERON:0001869!6.36e-10!32;UBERON:0001893!8.47e-10!34;UBERON:0002780!1.17e-09!41;UBERON:0001890!1.17e-09!41;UBERON:0006240!1.17e-09!41;UBERON:0002020!1.76e-09!34;UBERON:0003528!1.76e-09!34;UBERON:0002791!2.59e-09!33;UBERON:0003080!4.30e-09!42;UBERON:0002619!1.28e-08!22;UBERON:0000153!1.41e-08!129;UBERON:0007811!1.41e-08!129;UBERON:0000924!2.46e-08!173;UBERON:0006601!2.46e-08!173;UBERON:0003056!2.70e-08!61;UBERON:0001950!3.30e-08!20;UBERON:0000956!1.02e-07!25;UBERON:0000203!1.02e-07!25;UBERON:0007023!1.97e-07!115;UBERON:0004121!2.64e-07!169;UBERON:0000033!5.05e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.69e-10;32!UBERON:0001893;1.20e-09;34!UBERON:0003528;1.34e-09;34!UBERON:0002020;1.34e-09;34!UBERON:0002619;2.76e-09;22!UBERON:0002791;3.18e-09;32!UBERON:0001950;7.78e-09;20!UBERON:0000956;8.79e-09;25!UBERON:0000203;8.79e-09;25!UBERON:0002780;3.52e-08;41!UBERON:0001890;3.52e-08;41!UBERON:0000073;2.14e-07;53!UBERON:0002616;2.14e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.97e-14,89;UBERON:0001017,2.51e-13,81;UBERON:0002346,4.36e-13,86;UBERON:0001049,5.61e-12,56;UBERON:0005068,5.61e-12,56;UBERON:0006241,5.61e-12,56;UBERON:0007135,5.61e-12,56;UBERON:0000073,7.21e-12,53;UBERON:0002616,7.21e-12,53;UBERON:0000955,1.33e-11,68;UBERON:0006238,1.33e-11,68;UBERON:0003075,1.71e-11,82;UBERON:0007284,1.71e-11,82;UBERON:0001869,2.89e-10,32;UBERON:0001893,6.02e-10,34;UBERON:0002780,1.13e-09,41;UBERON:0001890,1.13e-09,41;UBERON:0003080,1.13e-09,41;UBERON:0006240,1.13e-09,41;UBERON:0003528,1.28e-09,34;UBERON:0002020,1.28e-09,34;UBERON:0003056,2.81e-09,61;UBERON:0002791,5.55e-09,32;UBERON:0004121,5.68e-09,171;UBERON:0000924,5.68e-09,171;UBERON:0006601,5.68e-09,171;UBERON:0002619,6.58e-09,22;UBERON:0010371,1.40e-08,104;UBERON:0001950,1.76e-08,20;UBERON:0000956,5.69e-08,25;UBERON:0000203,5.69e-08,25;UBERON:0007023,3.29e-07,114 | |||
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| |||
|short_description=p2@SLC41A3 | |||
}} |
Latest revision as of 03:45, 20 September 2015
Short description: | p2@SLC41A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SLC41A3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000315891, ENST00000346785, NM_001008485, NM_001008486, NM_017836, uc003eij.2, uc003eik.2, uc003eil.2, uc010hsd.1_5end |
EntrezGene: | SLC41A3 |
HGNC: | 31046 |
UniProt: | Q96GZ6D3DNA7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.46e-08 | 18 |
alpha-beta T cell | 2.46e-08 | 18 |
immature T cell | 2.46e-08 | 18 |
mature T cell | 2.46e-08 | 18 |
immature alpha-beta T cell | 2.46e-08 | 18 |
Ontology term | p-value | n |
---|---|---|
nervous system | 2.97e-14 | 89 |
central nervous system | 2.51e-13 | 81 |
neurectoderm | 4.36e-13 | 86 |
neural tube | 5.61e-12 | 56 |
neural rod | 5.61e-12 | 56 |
future spinal cord | 5.61e-12 | 56 |
neural keel | 5.61e-12 | 56 |
regional part of nervous system | 7.21e-12 | 53 |
regional part of brain | 7.21e-12 | 53 |
brain | 1.33e-11 | 68 |
future brain | 1.33e-11 | 68 |
neural plate | 1.71e-11 | 82 |
presumptive neural plate | 1.71e-11 | 82 |
cerebral hemisphere | 2.89e-10 | 32 |
telencephalon | 6.02e-10 | 34 |
regional part of forebrain | 1.13e-09 | 41 |
forebrain | 1.13e-09 | 41 |
anterior neural tube | 1.13e-09 | 41 |
future forebrain | 1.13e-09 | 41 |
brain grey matter | 1.28e-09 | 34 |
gray matter | 1.28e-09 | 34 |
pre-chordal neural plate | 2.81e-09 | 61 |
regional part of telencephalon | 5.55e-09 | 32 |
ectoderm-derived structure | 5.68e-09 | 171 |
ectoderm | 5.68e-09 | 171 |
presumptive ectoderm | 5.68e-09 | 171 |
regional part of cerebral cortex | 6.58e-09 | 22 |
ecto-epithelium | 1.40e-08 | 104 |
neocortex | 1.76e-08 | 20 |
cerebral cortex | 5.69e-08 | 25 |
pallium | 5.69e-08 | 25 |
adult organism | 3.29e-07 | 114 |