FFCP PHASE1:Hg19::chr4:103422499..103422632,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4790 | |EntrezGene=4790 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7794 | |HGNC=7794 | ||
|TSSclassifier=strong | |||
|UniProt=D6RH30,D6RDI9 | |UniProt=D6RH30,D6RDI9 | ||
|association_with_transcript=0bp_to_ENST00000507079,ENST00000511926_5end | |association_with_transcript=0bp_to_ENST00000507079,ENST00000511926_5end | ||
|cluster_id=chr4:103422499..103422632,+ | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_1_at_NFKB1_5end | |description=CAGE_peak_1_at_NFKB1_5end | ||
|id=chr4:103422499..103422632,+ | |id=chr4:103422499..103422632,+ | ||
|ontology_enrichment_celltype=CL:0000738!1.89e-53!140;CL:0000037!3.86e-46!172;CL:0000566!3.86e-46!172;CL:0002032!1.30e-43!165;CL:0000837!1.30e-43!165;CL:0000988!1.45e-43!182;CL:0002087!6.21e-43!119;CL:0002031!1.25e-41!124;CL:0000766!6.52e-31!76;CL:0000557!5.51e-28!71;CL:0000763!9.27e-26!112;CL:0000049!9.27e-26!112;CL:0002057!1.11e-25!42;CL:0002009!1.19e-25!65;CL:0002194!2.10e-24!63;CL:0000576!2.10e-24!63;CL:0000040!2.10e-24!63;CL:0000559!2.10e-24!63;CL:0000839!9.66e-24!70;CL:0000860!3.86e-23!45;CL:0000542!4.50e-16!53;CL:0000051!4.50e-16!53;CL:0000838!9.12e-16!52;CL:0000134!1.34e-13!358;CL:0002320!6.36e-12!365;CL:0000048!1.60e-10!430;CL:0000723!4.71e-10!436;CL:0000034!2.62e-09!444;CL:0000945!1.38e-08!24;CL:0000826!1.38e-08!24;CL:0000063!1.61e-08!578;CL:0000791!3.74e-08!18;CL:0000789!3.74e-08!18;CL:0002420!3.74e-08!18;CL:0002419!3.74e-08!18;CL:0000790!3.74e-08!18;CL:0002371!4.05e-08!591;CL:0000084!5.61e-07!25;CL:0000827!5.61e-07!25 | |ontology_enrichment_celltype=CL:0000738!1.89e-53!140;CL:0000037!3.86e-46!172;CL:0000566!3.86e-46!172;CL:0002032!1.30e-43!165;CL:0000837!1.30e-43!165;CL:0000988!1.45e-43!182;CL:0002087!6.21e-43!119;CL:0002031!1.25e-41!124;CL:0000766!6.52e-31!76;CL:0000557!5.51e-28!71;CL:0000763!9.27e-26!112;CL:0000049!9.27e-26!112;CL:0002057!1.11e-25!42;CL:0002009!1.19e-25!65;CL:0002194!2.10e-24!63;CL:0000576!2.10e-24!63;CL:0000040!2.10e-24!63;CL:0000559!2.10e-24!63;CL:0000839!9.66e-24!70;CL:0000860!3.86e-23!45;CL:0000542!4.50e-16!53;CL:0000051!4.50e-16!53;CL:0000838!9.12e-16!52;CL:0000134!1.34e-13!358;CL:0002320!6.36e-12!365;CL:0000048!1.60e-10!430;CL:0000723!4.71e-10!436;CL:0000034!2.62e-09!444;CL:0000945!1.38e-08!24;CL:0000826!1.38e-08!24;CL:0000063!1.61e-08!578;CL:0000791!3.74e-08!18;CL:0000789!3.74e-08!18;CL:0002420!3.74e-08!18;CL:0002419!3.74e-08!18;CL:0000790!3.74e-08!18;CL:0002371!4.05e-08!591;CL:0000084!5.61e-07!25;CL:0000827!5.61e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.14e-19;33!CL:0002057;2.14e-19;33!CL:0000473;6.55e-18;39!CL:0000234;6.55e-18;39!CL:0000576;1.95e-15;48!CL:0000766;2.52e-14;69!CL:0002087;4.41e-13;104!CL:0000738;1.72e-11;136!CL:0000542;2.82e-09;53!CL:0000945;1.36e-08;24!CL:0000988;2.91e-08;177!CL:0000763;3.42e-08;100!CL:0000791;3.77e-08;18!CL:0000789;3.77e-08;18!CL:0002419;3.77e-08;18!CL:0000084;5.54e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.51e-55,136;CL:0000037,2.28e-47,168;CL:0002032,7.80e-45,161;CL:0000837,7.80e-45,161;CL:0000988,1.28e-44,177;CL:0002087,1.29e-44,115;CL:0002031,3.35e-43,120;CL:0000766,7.31e-33,72;CL:0000557,6.91e-30,67;CL:0000473,1.22e-27,48;CL:0000234,1.22e-27,48;CL:0002009,1.46e-27,61;CL:0000763,6.79e-27,108;CL:0000049,6.79e-27,108;CL:0002194,2.76e-26,59;CL:0000576,2.76e-26,59;CL:0000040,2.76e-26,59;CL:0000559,2.76e-26,59;CL:0000860,1.11e-25,42;CL:0002057,1.11e-25,42;CL:0000839,2.13e-25,66;CL:0000542,4.50e-16,53;CL:0000051,4.50e-16,53;CL:0000838,9.12e-16,52;CL:0000134,6.79e-14,354;CL:0002320,3.44e-12,361;CL:0000048,1.01e-10,427;CL:0000723,3.01e-10,433;CL:0000034,1.72e-09,441;CL:0000945,1.38e-08,24;CL:0000826,1.38e-08,24;CL:0000791,3.74e-08,18;CL:0000789,3.74e-08,18;CL:0002420,3.74e-08,18;CL:0002419,3.74e-08,18;CL:0000790,3.74e-08,18;CL:0000084,5.61e-07,25;CL:0000827,5.61e-07,25 | |||
|ontology_enrichment_development_v019=CL:0002057;1.08e-18;42!CL:0000051;2.82e-09;53!CL:0000790;3.77e-08;18!CL:0000049;9.92e-08;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.10e-33!112;UBERON:0002390!1.38e-31!102;UBERON:0003061!1.38e-31!102;UBERON:0003081!1.03e-25!216;UBERON:0002371!6.35e-24!80;UBERON:0002405!3.04e-23!115;UBERON:0001474!3.17e-20!86;UBERON:0004765!1.67e-15!101;UBERON:0001434!1.67e-15!101;UBERON:0002384!5.79e-11!375;UBERON:0002204!6.13e-09!167 | |ontology_enrichment_uberon=UBERON:0002193!1.10e-33!112;UBERON:0002390!1.38e-31!102;UBERON:0003061!1.38e-31!102;UBERON:0003081!1.03e-25!216;UBERON:0002371!6.35e-24!80;UBERON:0002405!3.04e-23!115;UBERON:0001474!3.17e-20!86;UBERON:0004765!1.67e-15!101;UBERON:0001434!1.67e-15!101;UBERON:0002384!5.79e-11!375;UBERON:0002204!6.13e-09!167 | ||
|ontology_enrichment_uberon_v019= | |||
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| ||
|short_description=p1@NFKB1 | |short_description=p1@NFKB1 | ||
}} | }} |
Latest revision as of 03:58, 20 September 2015
Short description: | p1@NFKB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NFKB1_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 0bp_to_ENST00000507079, ENST00000511926_5end |
EntrezGene: | NFKB1 |
HGNC: | 7794 |
UniProt: | D6RH30D6RDI9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 4.00e-35 | 108 |
hematopoietic system | 4.45e-33 | 98 |
blood island | 4.45e-33 | 98 |
immune system | 1.38e-29 | 93 |
lateral plate mesoderm | 1.20e-26 | 203 |
bone marrow | 2.17e-25 | 76 |
bone element | 2.12e-21 | 82 |
skeletal element | 1.79e-18 | 90 |
skeletal system | 4.57e-15 | 100 |
connective tissue | 3.28e-11 | 371 |
mesoderm | 1.20e-09 | 315 |
mesoderm-derived structure | 1.20e-09 | 315 |
presumptive mesoderm | 1.20e-09 | 315 |
musculoskeletal system | 1.37e-08 | 167 |