FFCP PHASE1:Hg19::chr3:126675964..126675975,+: Difference between revisions
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|id=chr3:126675964..126675975,+
|short_description=p6@CHCHD6
|description=CAGE_peak_6_at_CHCHD6_5end
|association_with_transcript=111bp_to_ENST00000510044_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84303 | |EntrezGene=84303 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28184 | |HGNC=28184 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=111bp_to_ENST00000510044_5end | |||
|cluster_id=chr3:126675964..126675975,+ | |||
|coexpression_cluster_id=C1500 | |||
|description=CAGE_peak_6_at_CHCHD6_5end | |||
|id=chr3:126675964..126675975,+ | |||
|ontology_enrichment_celltype=CL:0002619!8.26e-30!3;CL:0000148!8.02e-24!10;CL:0000541!8.02e-24!10;CL:0000147!5.25e-17!14;CL:0000710!7.07e-12!20;CL:0002566!7.46e-11!1;CL:0000075!9.22e-09!27;CL:0000325!1.92e-08!39;CL:0002274!2.51e-08!5;CL:0000457!2.51e-08!5;CL:0002191!2.51e-08!5;CL:0000097!2.51e-08!5;CL:0000831!2.51e-08!5;CL:0002028!2.51e-08!5;CL:0000839!1.24e-07!70;CL:0002077!3.88e-07!33 | |||
|ontology_enrichment_celltype_v019=CL:0002619;1.49e-40;3!CL:0000148;5.92e-33;10!CL:0000147;1.41e-23;14!CL:0000710;1.58e-16;20!CL:0002566;2.10e-14;1!CL:0000075;3.03e-12;27!CL:0000235;5.81e-10;6!CL:0002077;6.83e-09;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0002619,1.14e-40,3;CL:0000148,8.54e-33,10;CL:0000541,8.54e-33,10;CL:0000147,1.82e-23,14;CL:0000710,1.90e-16,20;CL:0002566,2.11e-14,1;CL:0000075,3.46e-12,27;CL:0000235,5.94e-10,6;CL:0002077,1.13e-09,34;CL:0000333,1.24e-07,41 | |||
|ontology_enrichment_development_v019=UBERON:0003056;2.31e-18;3!UBERON:0005425;2.10e-14;1 | |||
|ontology_enrichment_disease=DOID:1909!2.26e-20!2 | |||
|ontology_enrichment_disease_v019=DOID:1909;2.56e-27;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,1.40e-27,2 | |||
|ontology_enrichment_uberon=UBERON:0000941!9.05e-11!1;UBERON:0004904!9.05e-11!1;UBERON:0002464!9.05e-11!1;UBERON:0001021!9.05e-11!1;UBERON:0001785!9.05e-11!1;UBERON:0001736!1.10e-10!1;UBERON:0006298!1.10e-10!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;2.10e-14;1!UBERON:0001785;2.10e-14;1!UBERON:0002464;2.10e-14;1!UBERON:0004904;2.10e-14;1!UBERON:0001021;2.10e-14;1!UBERON:0003714;7.52e-08;2!UBERON:0005162;7.52e-08;2!UBERON:0000122;7.52e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,2.75e-14,1;UBERON:0001785,2.75e-14,1;UBERON:0002464,2.75e-14,1;UBERON:0004904,2.75e-14,1;UBERON:0001021,2.75e-14,1;UBERON:0003902,2.75e-14,1;UBERON:0005425,2.75e-14,1;UBERON:0000966,1.21e-09,6;UBERON:0005388,1.21e-09,6;UBERON:0001802,1.21e-09,6;UBERON:0003714,8.60e-08,2;UBERON:0005162,8.60e-08,2;UBERON:0000122,8.60e-08,2 | |||
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|short_description=p6@CHCHD6 | |||
}} | }} |
Latest revision as of 04:50, 20 September 2015
Short description: | p6@CHCHD6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CHCHD6_5end |
Coexpression cluster: | C1500_Melanocyte_Monocytederived_CD14_melanoma_retina_Macrophage_Mast |
Association with transcript: | 111bp_to_ENST00000510044_5end |
EntrezGene: | CHCHD6 |
HGNC: | 28184 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult endothelial progenitor cell | 1.14e-40 | 3 |
melanocyte | 8.54e-33 | 10 |
melanoblast | 8.54e-33 | 10 |
pigment cell | 1.82e-23 | 14 |
neurecto-epithelial cell | 1.90e-16 | 20 |
dark melanocyte | 2.11e-14 | 1 |
columnar/cuboidal epithelial cell | 3.46e-12 | 27 |
macrophage | 5.94e-10 | 6 |
ecto-epithelial cell | 1.13e-09 | 34 |
migratory neural crest cell | 1.24e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 2.75e-14 | 1 |
cranial nerve | 2.75e-14 | 1 |
nerve trunk | 2.75e-14 | 1 |
nerve connecting eye with brain | 2.75e-14 | 1 |
nerve | 2.75e-14 | 1 |
retinal neural layer | 2.75e-14 | 1 |
presumptive neural retina | 2.75e-14 | 1 |
retina | 1.21e-09 | 6 |
photoreceptor array | 1.21e-09 | 6 |
posterior segment of eyeball | 1.21e-09 | 6 |
neural tissue | 8.60e-08 | 2 |
multi cell component structure | 8.60e-08 | 2 |
neuron projection bundle | 8.60e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
melanoma | 1.40e-27 | 2 |