FFCP PHASE1:Hg19::chrX:18622332..18622337,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6792 | |EntrezGene=6792 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11411 | |HGNC=11411 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=265bp_to_ENST00000463994_5end | |association_with_transcript=265bp_to_ENST00000463994_5end | ||
|cluster_id=chrX:18622332..18622337,+ | |||
|description=CAGE_peak_5_at_CDKL5_5end | |description=CAGE_peak_5_at_CDKL5_5end | ||
|id=chrX:18622332..18622337,+ | |id=chrX:18622332..18622337,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000235;5.73e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,5.92e-08,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.87e-23!57;UBERON:0005068!1.87e-23!57;UBERON:0006241!1.87e-23!57;UBERON:0007135!1.87e-23!57;UBERON:0005743!8.71e-21!86;UBERON:0002616!1.07e-20!59;UBERON:0002020!1.14e-19!34;UBERON:0003528!1.14e-19!34;UBERON:0001017!1.19e-19!82;UBERON:0002780!4.27e-19!41;UBERON:0001890!4.27e-19!41;UBERON:0006240!4.27e-19!41;UBERON:0002619!4.86e-19!22;UBERON:0001869!6.15e-19!32;UBERON:0000073!6.26e-19!94;UBERON:0001016!6.26e-19!94;UBERON:0000955!9.71e-19!69;UBERON:0006238!9.71e-19!69;UBERON:0001950!1.29e-18!20;UBERON:0003080!1.74e-18!42;UBERON:0000956!2.45e-18!25;UBERON:0000203!2.45e-18!25;UBERON:0001893!1.66e-17!34;UBERON:0002791!1.66e-16!33;UBERON:0002346!1.14e-14!90;UBERON:0003075!1.19e-14!86;UBERON:0007284!1.19e-14!86;UBERON:0003056!5.52e-13!61;UBERON:0007023!1.08e-12!115;UBERON:0000033!2.81e-11!123;UBERON:0000153!2.65e-10!129;UBERON:0007811!2.65e-10!129;UBERON:0000924!5.31e-10!173;UBERON:0006601!5.31e-10!173;UBERON:0004121!8.02e-10!169;UBERON:0001872!8.38e-10!5;UBERON:0001871!2.09e-09!7;UBERON:0000200!1.09e-07!6;UBERON:0002298!1.91e-07!8;UBERON:0002771!3.66e-07!3;UBERON:0000349!7.82e-07!5 | |ontology_enrichment_uberon=UBERON:0001049!1.87e-23!57;UBERON:0005068!1.87e-23!57;UBERON:0006241!1.87e-23!57;UBERON:0007135!1.87e-23!57;UBERON:0005743!8.71e-21!86;UBERON:0002616!1.07e-20!59;UBERON:0002020!1.14e-19!34;UBERON:0003528!1.14e-19!34;UBERON:0001017!1.19e-19!82;UBERON:0002780!4.27e-19!41;UBERON:0001890!4.27e-19!41;UBERON:0006240!4.27e-19!41;UBERON:0002619!4.86e-19!22;UBERON:0001869!6.15e-19!32;UBERON:0000073!6.26e-19!94;UBERON:0001016!6.26e-19!94;UBERON:0000955!9.71e-19!69;UBERON:0006238!9.71e-19!69;UBERON:0001950!1.29e-18!20;UBERON:0003080!1.74e-18!42;UBERON:0000956!2.45e-18!25;UBERON:0000203!2.45e-18!25;UBERON:0001893!1.66e-17!34;UBERON:0002791!1.66e-16!33;UBERON:0002346!1.14e-14!90;UBERON:0003075!1.19e-14!86;UBERON:0007284!1.19e-14!86;UBERON:0003056!5.52e-13!61;UBERON:0007023!1.08e-12!115;UBERON:0000033!2.81e-11!123;UBERON:0000153!2.65e-10!129;UBERON:0007811!2.65e-10!129;UBERON:0000924!5.31e-10!173;UBERON:0006601!5.31e-10!173;UBERON:0004121!8.02e-10!169;UBERON:0001872!8.38e-10!5;UBERON:0001871!2.09e-09!7;UBERON:0000200!1.09e-07!6;UBERON:0002298!1.91e-07!8;UBERON:0002771!3.66e-07!3;UBERON:0000349!7.82e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0001872;2.34e-32;5!UBERON:0001950;1.26e-30;20!UBERON:0002619;4.85e-28;22!UBERON:0000956;6.59e-25;25!UBERON:0000203;6.59e-25;25!UBERON:0002771;3.44e-21;2!UBERON:0001893;8.45e-21;34!UBERON:0001869;8.54e-21;32!UBERON:0002791;5.42e-19;32!UBERON:0003528;4.32e-18;34!UBERON:0002020;4.32e-18;34!UBERON:0002780;1.60e-11;41!UBERON:0001890;1.60e-11;41!UBERON:0002021;3.22e-09;5!UBERON:0000073;4.76e-08;53!UBERON:0002616;4.76e-08;53!UBERON:0000200;5.73e-08;6!UBERON:0001871;5.22e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001872,2.34e-32,5;UBERON:0001950,1.22e-30,20;UBERON:0002619,4.68e-28,22;UBERON:0000956,6.39e-25,25;UBERON:0000203,6.39e-25,25;UBERON:0002771,3.11e-21,2;UBERON:0002791,8.18e-20,32;UBERON:0001869,8.18e-20,32;UBERON:0003528,9.96e-19,34;UBERON:0002020,9.96e-19,34;UBERON:0001893,9.96e-19,34;UBERON:0002780,9.75e-16,41;UBERON:0001890,9.75e-16,41;UBERON:0003080,9.75e-16,41;UBERON:0006240,9.75e-16,41;UBERON:0000073,2.11e-12,53;UBERON:0002616,2.11e-12,53;UBERON:0001049,8.70e-12,56;UBERON:0005068,8.70e-12,56;UBERON:0006241,8.70e-12,56;UBERON:0007135,8.70e-12,56;UBERON:0003056,6.84e-11,61;UBERON:0000955,1.01e-09,68;UBERON:0006238,1.01e-09,68;UBERON:0002021,3.22e-09,5;UBERON:0001017,2.69e-08,81;UBERON:0003075,2.69e-08,82;UBERON:0007284,2.69e-08,82;UBERON:0000200,5.54e-08,6;UBERON:0002346,6.09e-08,86;UBERON:0001016,1.53e-07,89;UBERON:0001871,5.08e-07,6 | |||
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| ||
|short_description=p5@CDKL5 | |short_description=p5@CDKL5 | ||
}} | }} |
Latest revision as of 07:16, 20 September 2015
Short description: | p5@CDKL5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CDKL5_5end |
Coexpression cluster: | NA |
Association with transcript: | 265bp_to_ENST00000463994_5end |
EntrezGene: | CDKL5 |
HGNC: | 11411 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 5.92e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
parietal lobe | 2.34e-32 | 5 |
neocortex | 1.22e-30 | 20 |
regional part of cerebral cortex | 4.68e-28 | 22 |
cerebral cortex | 6.39e-25 | 25 |
pallium | 6.39e-25 | 25 |
middle temporal gyrus | 3.11e-21 | 2 |
regional part of telencephalon | 8.18e-20 | 32 |
cerebral hemisphere | 8.18e-20 | 32 |
brain grey matter | 9.96e-19 | 34 |
gray matter | 9.96e-19 | 34 |
telencephalon | 9.96e-19 | 34 |
regional part of forebrain | 9.75e-16 | 41 |
forebrain | 9.75e-16 | 41 |
anterior neural tube | 9.75e-16 | 41 |
future forebrain | 9.75e-16 | 41 |
regional part of nervous system | 2.11e-12 | 53 |
regional part of brain | 2.11e-12 | 53 |
neural tube | 8.70e-12 | 56 |
neural rod | 8.70e-12 | 56 |
future spinal cord | 8.70e-12 | 56 |
neural keel | 8.70e-12 | 56 |
pre-chordal neural plate | 6.84e-11 | 61 |
brain | 1.01e-09 | 68 |
future brain | 1.01e-09 | 68 |
occipital lobe | 3.22e-09 | 5 |
central nervous system | 2.69e-08 | 81 |
neural plate | 2.69e-08 | 82 |
presumptive neural plate | 2.69e-08 | 82 |
gyrus | 5.54e-08 | 6 |
neurectoderm | 6.09e-08 | 86 |
nervous system | 1.53e-07 | 89 |
temporal lobe | 5.08e-07 | 6 |