FFCP PHASE1:Hg19::chr11:77184963..77185028,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5058 | |EntrezGene=5058 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8590 | |HGNC=8590 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=76bp_to_ENST00000278568_5end | |association_with_transcript=76bp_to_ENST00000278568_5end | ||
|cluster_id=chr11:77184963..77185028,- | |||
|coexpression_cluster_id=C3203 | |coexpression_cluster_id=C3203 | ||
|description=CAGE_peak_2_at_PAK1_5end | |description=CAGE_peak_2_at_PAK1_5end | ||
|id=chr11:77184963..77185028,- | |id=chr11:77184963..77185028,- | ||
|ontology_enrichment_celltype=CL:0002319!6.20e-08!25 | |ontology_enrichment_celltype=CL:0002319!6.20e-08!25 | ||
|ontology_enrichment_celltype_v019=CL:0002319;1.01e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,8.00e-08,25 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!5.23e-07!143 | |ontology_enrichment_disease=DOID:0050687!5.23e-07!143 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,6.60e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0005743!2.54e-21!86;UBERON:0000073!9.63e-21!94;UBERON:0001016!9.63e-21!94;UBERON:0001017!2.54e-20!82;UBERON:0002346!7.07e-17!90;UBERON:0003075!1.34e-16!86;UBERON:0007284!1.34e-16!86;UBERON:0001049!8.67e-16!57;UBERON:0005068!8.67e-16!57;UBERON:0006241!8.67e-16!57;UBERON:0007135!8.67e-16!57;UBERON:0000955!1.47e-15!69;UBERON:0006238!1.47e-15!69;UBERON:0000924!4.42e-15!173;UBERON:0006601!4.42e-15!173;UBERON:0004121!1.09e-14!169;UBERON:0003056!1.81e-14!61;UBERON:0000033!5.48e-14!123;UBERON:0000153!8.80e-14!129;UBERON:0007811!8.80e-14!129;UBERON:0000062!1.06e-13!511;UBERON:0002616!3.78e-13!59;UBERON:0001869!1.75e-12!32;UBERON:0002780!2.58e-12!41;UBERON:0001890!2.58e-12!41;UBERON:0006240!2.58e-12!41;UBERON:0001893!2.78e-12!34;UBERON:0003080!3.17e-12!42;UBERON:0002791!7.22e-12!33;UBERON:0002020!7.38e-12!34;UBERON:0003528!7.38e-12!34;UBERON:0000922!1.00e-11!612;UBERON:0000956!2.24e-11!25;UBERON:0000203!2.24e-11!25;UBERON:0002619!2.33e-10!22;UBERON:0001950!4.12e-10!20;UBERON:0007023!1.07e-09!115;UBERON:0002050!1.96e-09!605;UBERON:0005423!1.96e-09!605;UBERON:0000923!2.27e-09!604;UBERON:0005291!2.27e-09!604;UBERON:0006598!2.27e-09!604;UBERON:0002532!2.27e-09!604;UBERON:0000064!6.32e-09!219 | |ontology_enrichment_uberon=UBERON:0005743!2.54e-21!86;UBERON:0000073!9.63e-21!94;UBERON:0001016!9.63e-21!94;UBERON:0001017!2.54e-20!82;UBERON:0002346!7.07e-17!90;UBERON:0003075!1.34e-16!86;UBERON:0007284!1.34e-16!86;UBERON:0001049!8.67e-16!57;UBERON:0005068!8.67e-16!57;UBERON:0006241!8.67e-16!57;UBERON:0007135!8.67e-16!57;UBERON:0000955!1.47e-15!69;UBERON:0006238!1.47e-15!69;UBERON:0000924!4.42e-15!173;UBERON:0006601!4.42e-15!173;UBERON:0004121!1.09e-14!169;UBERON:0003056!1.81e-14!61;UBERON:0000033!5.48e-14!123;UBERON:0000153!8.80e-14!129;UBERON:0007811!8.80e-14!129;UBERON:0000062!1.06e-13!511;UBERON:0002616!3.78e-13!59;UBERON:0001869!1.75e-12!32;UBERON:0002780!2.58e-12!41;UBERON:0001890!2.58e-12!41;UBERON:0006240!2.58e-12!41;UBERON:0001893!2.78e-12!34;UBERON:0003080!3.17e-12!42;UBERON:0002791!7.22e-12!33;UBERON:0002020!7.38e-12!34;UBERON:0003528!7.38e-12!34;UBERON:0000922!1.00e-11!612;UBERON:0000956!2.24e-11!25;UBERON:0000203!2.24e-11!25;UBERON:0002619!2.33e-10!22;UBERON:0001950!4.12e-10!20;UBERON:0007023!1.07e-09!115;UBERON:0002050!1.96e-09!605;UBERON:0005423!1.96e-09!605;UBERON:0000923!2.27e-09!604;UBERON:0005291!2.27e-09!604;UBERON:0006598!2.27e-09!604;UBERON:0002532!2.27e-09!604;UBERON:0000064!6.32e-09!219 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.43e-12;32!UBERON:0000956;1.99e-12;25!UBERON:0000203;1.99e-12;25!UBERON:0001893;1.03e-11;34!UBERON:0002791;1.50e-11;32!UBERON:0003528;1.90e-11;34!UBERON:0002020;1.90e-11;34!UBERON:0002619;2.60e-11;22!UBERON:0001950;5.74e-11;20!UBERON:0002780;8.26e-10;41!UBERON:0001890;8.26e-10;41!UBERON:0000073;1.19e-09;53!UBERON:0002616;1.19e-09;53!UBERON:0000955;1.75e-07;68!UBERON:0001016;1.85e-07;83!UBERON:0001017;3.12e-07;75 | |||
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| ||
|short_description=p2@PAK1 | |short_description=p2@PAK1 | ||
}} | }} |
Latest revision as of 13:59, 24 September 2015
Short description: | p2@PAK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PAK1_5end |
Coexpression cluster: | C3203_testicular_Mast_H9_Eosinophils_iPS_immature_gall |
Association with transcript: | 76bp_to_ENST00000278568_5end |
EntrezGene: | PAK1 |
HGNC: | 8590 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 8.00e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.48e-20 | 81 |
nervous system | 2.18e-19 | 89 |
neural tube | 8.39e-17 | 56 |
neural rod | 8.39e-17 | 56 |
future spinal cord | 8.39e-17 | 56 |
neural keel | 8.39e-17 | 56 |
regional part of nervous system | 3.22e-16 | 53 |
regional part of brain | 3.22e-16 | 53 |
neurectoderm | 7.31e-16 | 86 |
neural plate | 8.88e-16 | 82 |
presumptive neural plate | 8.88e-16 | 82 |
brain | 1.90e-15 | 68 |
future brain | 1.90e-15 | 68 |
pre-chordal neural plate | 7.15e-15 | 61 |
organ system subdivision | 4.08e-14 | 223 |
ecto-epithelium | 8.56e-14 | 104 |
cerebral hemisphere | 1.72e-13 | 32 |
ectoderm-derived structure | 5.69e-13 | 171 |
ectoderm | 5.69e-13 | 171 |
presumptive ectoderm | 5.69e-13 | 171 |
regional part of forebrain | 6.44e-13 | 41 |
forebrain | 6.44e-13 | 41 |
anterior neural tube | 6.44e-13 | 41 |
future forebrain | 6.44e-13 | 41 |
telencephalon | 6.47e-13 | 34 |
brain grey matter | 1.85e-12 | 34 |
gray matter | 1.85e-12 | 34 |
cerebral cortex | 2.79e-12 | 25 |
pallium | 2.79e-12 | 25 |
regional part of telencephalon | 3.56e-12 | 32 |
regional part of cerebral cortex | 3.60e-11 | 22 |
neocortex | 6.70e-11 | 20 |
embryo | 1.73e-08 | 592 |
adult organism | 2.73e-08 | 114 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 6.60e-07 | 143 |