FFCP PHASE1:Hg19::chr17:40575209..40575222,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=284119 | |EntrezGene=284119 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9688 | |HGNC=9688 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=50bp_to_uc010wgi.1_5end | |association_with_transcript=50bp_to_uc010wgi.1_5end | ||
|cluster_id=chr17:40575209..40575222,- | |||
|coexpression_cluster_id=C1780 | |coexpression_cluster_id=C1780 | ||
|description=CAGE_peak_2_at_PTRF_5end | |description=CAGE_peak_2_at_PTRF_5end | ||
|id=chr17:40575209..40575222,- | |id=chr17:40575209..40575222,- | ||
|ontology_enrichment_celltype=CL:0000055!8.07e-38!180;CL:0000057!4.09e-22!75;CL:0000222!3.12e-20!119;CL:0000680!2.82e-18!57;CL:0000056!2.82e-18!57;CL:0000355!2.82e-18!57;CL:0000183!1.37e-17!59;CL:0000187!2.63e-17!54;CL:0000192!2.39e-14!42;CL:0000514!2.39e-14!42;CL:0000393!2.97e-14!60;CL:0000211!2.97e-14!60;CL:0000359!2.02e-11!32;CL:0000220!5.70e-11!246;CL:0002321!1.75e-10!248;CL:0000136!3.74e-10!15;CL:0002620!8.95e-08!23;CL:0002334!6.68e-07!12 | |ontology_enrichment_celltype=CL:0000055!8.07e-38!180;CL:0000057!4.09e-22!75;CL:0000222!3.12e-20!119;CL:0000680!2.82e-18!57;CL:0000056!2.82e-18!57;CL:0000355!2.82e-18!57;CL:0000183!1.37e-17!59;CL:0000187!2.63e-17!54;CL:0000192!2.39e-14!42;CL:0000514!2.39e-14!42;CL:0000393!2.97e-14!60;CL:0000211!2.97e-14!60;CL:0000359!2.02e-11!32;CL:0000220!5.70e-11!246;CL:0002321!1.75e-10!248;CL:0000136!3.74e-10!15;CL:0002620!8.95e-08!23;CL:0002334!6.68e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000192;1.82e-11;43!CL:0000359;4.11e-11;32!CL:0000187;2.17e-10;55!CL:0000057;2.58e-09;73!CL:0000136;3.73e-09;13!CL:0000393;4.24e-08;61!CL:0000211;4.24e-08;61!CL:0002620;6.31e-08;23!CL:0002320;3.85e-07;188!CL:0002334;4.63e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.50e-23,76;CL:0000222,2.23e-21,121;CL:0000680,2.39e-19,58;CL:0000056,2.39e-19,58;CL:0000355,2.39e-19,58;CL:0000187,2.40e-18,55;CL:0000192,2.65e-15,43;CL:0000514,2.65e-15,43;CL:0000393,7.13e-15,61;CL:0000211,7.13e-15,61;CL:0000359,1.08e-11,32;CL:0000136,2.16e-10,15;CL:0002321,8.77e-10,250;CL:0002620,6.02e-08,23;CL:0002334,4.74e-07,12;CL:0000499,9.43e-07,28 | |||
|ontology_enrichment_development_v019=CL:0000514;1.82e-11;43!CL:0000355;1.90e-10;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!6.11e-23!83;UBERON:0002329!6.11e-23!83;UBERON:0003077!6.11e-23!83;UBERON:0003059!6.11e-23!83;UBERON:0007282!6.11e-23!83;UBERON:0009618!6.11e-23!83;UBERON:0007285!6.11e-23!83;UBERON:0004290!3.16e-21!70;UBERON:0000486!6.89e-20!82;UBERON:0002385!7.08e-20!63;UBERON:0001015!7.08e-20!63;UBERON:0000383!7.08e-20!63;UBERON:0001134!1.30e-19!61;UBERON:0002036!1.30e-19!61;UBERON:0003082!1.30e-19!61;UBERON:0000475!2.48e-19!365;UBERON:0004872!4.63e-19!84;UBERON:0002049!1.80e-18!79;UBERON:0007798!1.80e-18!79;UBERON:0005256!9.65e-18!143;UBERON:0000055!9.48e-17!69;UBERON:0001981!9.84e-17!60;UBERON:0007500!9.84e-17!60;UBERON:0004537!9.84e-17!60;UBERON:0006965!9.84e-17!60;UBERON:0002100!9.11e-16!216;UBERON:0001637!4.78e-15!42;UBERON:0003509!4.78e-15!42;UBERON:0004572!4.78e-15!42;UBERON:0000481!8.06e-15!347;UBERON:0003914!1.48e-13!118;UBERON:0001009!1.95e-13!113;UBERON:0000468!2.34e-13!659;UBERON:0000119!2.43e-13!312;UBERON:0000483!2.89e-13!309;UBERON:0000490!3.70e-13!138;UBERON:0004535!4.35e-13!110;UBERON:0004573!7.10e-13!33;UBERON:0004571!7.10e-13!33;UBERON:0000477!7.36e-13!286;UBERON:0003104!7.71e-13!238;UBERON:0009142!7.71e-13!238;UBERON:0003102!1.63e-12!95;UBERON:0000467!3.69e-10!625;UBERON:0004111!4.53e-10!241;UBERON:0000480!6.43e-10!626;UBERON:0002199!3.20e-08!45;UBERON:0002416!3.20e-08!45;UBERON:0001013!4.48e-08!14;UBERON:0007100!7.01e-08!27;UBERON:0000948!1.10e-07!24;UBERON:0005498!1.10e-07!24;UBERON:0004140!1.10e-07!24;UBERON:0009881!1.10e-07!24;UBERON:0004141!1.10e-07!24;UBERON:0003084!1.10e-07!24;UBERON:0007005!1.10e-07!24;UBERON:0004139!1.10e-07!24;UBERON:0004291!1.10e-07!24;UBERON:0000947!2.21e-07!21;UBERON:0010191!2.21e-07!21;UBERON:0003103!2.65e-07!69;UBERON:0000926!5.18e-07!448;UBERON:0004120!5.18e-07!448;UBERON:0006603!5.18e-07!448 | |ontology_enrichment_uberon=UBERON:0000914!6.11e-23!83;UBERON:0002329!6.11e-23!83;UBERON:0003077!6.11e-23!83;UBERON:0003059!6.11e-23!83;UBERON:0007282!6.11e-23!83;UBERON:0009618!6.11e-23!83;UBERON:0007285!6.11e-23!83;UBERON:0004290!3.16e-21!70;UBERON:0000486!6.89e-20!82;UBERON:0002385!7.08e-20!63;UBERON:0001015!7.08e-20!63;UBERON:0000383!7.08e-20!63;UBERON:0001134!1.30e-19!61;UBERON:0002036!1.30e-19!61;UBERON:0003082!1.30e-19!61;UBERON:0000475!2.48e-19!365;UBERON:0004872!4.63e-19!84;UBERON:0002049!1.80e-18!79;UBERON:0007798!1.80e-18!79;UBERON:0005256!9.65e-18!143;UBERON:0000055!9.48e-17!69;UBERON:0001981!9.84e-17!60;UBERON:0007500!9.84e-17!60;UBERON:0004537!9.84e-17!60;UBERON:0006965!9.84e-17!60;UBERON:0002100!9.11e-16!216;UBERON:0001637!4.78e-15!42;UBERON:0003509!4.78e-15!42;UBERON:0004572!4.78e-15!42;UBERON:0000481!8.06e-15!347;UBERON:0003914!1.48e-13!118;UBERON:0001009!1.95e-13!113;UBERON:0000468!2.34e-13!659;UBERON:0000119!2.43e-13!312;UBERON:0000483!2.89e-13!309;UBERON:0000490!3.70e-13!138;UBERON:0004535!4.35e-13!110;UBERON:0004573!7.10e-13!33;UBERON:0004571!7.10e-13!33;UBERON:0000477!7.36e-13!286;UBERON:0003104!7.71e-13!238;UBERON:0009142!7.71e-13!238;UBERON:0003102!1.63e-12!95;UBERON:0000467!3.69e-10!625;UBERON:0004111!4.53e-10!241;UBERON:0000480!6.43e-10!626;UBERON:0002199!3.20e-08!45;UBERON:0002416!3.20e-08!45;UBERON:0001013!4.48e-08!14;UBERON:0007100!7.01e-08!27;UBERON:0000948!1.10e-07!24;UBERON:0005498!1.10e-07!24;UBERON:0004140!1.10e-07!24;UBERON:0009881!1.10e-07!24;UBERON:0004141!1.10e-07!24;UBERON:0003084!1.10e-07!24;UBERON:0007005!1.10e-07!24;UBERON:0004139!1.10e-07!24;UBERON:0004291!1.10e-07!24;UBERON:0000947!2.21e-07!21;UBERON:0010191!2.21e-07!21;UBERON:0003103!2.65e-07!69;UBERON:0000926!5.18e-07!448;UBERON:0004120!5.18e-07!448;UBERON:0006603!5.18e-07!448 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;6.91e-12;33!UBERON:0004571;6.91e-12;33!UBERON:0001637;3.40e-11;42!UBERON:0003509;3.40e-11;42!UBERON:0004572;3.40e-11;42!UBERON:0007500;3.35e-09;56!UBERON:0001981;3.35e-09;56!UBERON:0004537;3.35e-09;56!UBERON:0002385;6.76e-09;31!UBERON:0001015;6.76e-09;31!UBERON:0000383;6.76e-09;31!UBERON:0001013;2.89e-08;14!UBERON:0000055;4.69e-08;65!UBERON:0002384;9.78e-08;198!UBERON:0002049;1.47e-07;75!UBERON:0007798;1.47e-07;75!UBERON:0000947;1.50e-07;21!UBERON:0010191;1.50e-07;21!UBERON:0007100;2.31e-07;25!UBERON:0000948;3.71e-07;22 | |||
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|phase1_expression=82.6636625681033,74.7210828379531,88.3784113681739,127.093088908476,81.3469191857664,130.850778615055,106.38594883069,61.9085475958294,76.5273890625527,10.3208253330634,7.6758128476967,0.873765488520689,3.16520373874144,52.9719990669,80.1981649261556,9.41255205032485,20.4916139528152,16.7971320789096,21.4690431467823,27.7022380672773,62.6282122119857,59.2429423593586,12.0219114595044,12.5924471067053,19.9612796955736,0,0,0,0,0,0,5.51652734687356,11.7470308323518,8.8740962440029,0,0,1.17440175733939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,3.63239701580021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0.560508562981536,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,75.5801285573281,25.4866326687382,31.9656404608826,72.2878304769133,172.961579169382,128.913401875133,31.0161519349929,63.7491680096453,9.26441208207865,9.75609348835281,9.13481771208511,11.9845854080407,8.01449634243593,9.64039551239516,0,0,0.531831842075461,0,0,0,18.6836662924703,32.6889146140327,18.3984465852025,37.3103241669846,24.3309673001745,22.0094433552054,19.2275369213866,12.1455876809585,6.04802646567407,9.37217715741077,19.3358072212391,19.7670747486813,39.0499292077071,13.971197053143,20.253548697044,10.9838665789418,7.85852804191594,5.0675166217495,10.7321646226118,23.7316414892032,17.5873674173191,0,0,11.7745394078484,73.0548768992118,57.2369912723901,43.2978021259226,61.9567100817438,58.5202830627289,59.9925032152269,48.0370480783672,38.9734726499113,25.8305159381806,16.4347019925019,19.942352179842,17.8601764621019,21.31850920576,25.0723932062162,24.0363259159347,29.6645347203114,38.4083109018129,11.1562773711577,8.90301194024723,9.83155646915739,36.339442483371,22.6015143853653,51.7662163690585,45.144108576718,55.6350590876753,65.5316180595379,84.7969407343161,10.7735112930602,13.7630371859161,25.766962740029,50.4824264012964,74.4765343791618,41.4657042582207,17.4685562066432,44.12985037946,54.6706915375533,79.2625310336761,62.7190390816401,51.3201595607426,44.5718134278938,63.4658480090721,33.4177137837707,66.5494745250987,66.137648851958,77.2298649608891,74.0338940230158,71.3569280958395,40.5023434875114,38.6598150467912,3.09217365061275,2.18196896472668,3.72845974005705,0,0.132529768321485,0.348581828608555,0.10366105501537,0.252320850875628,0.36497735907583,40.6768784057521,58.5349253755526,30.3896826975457,113.305774439803,164.588521820666,6.7434876022711,7.75489574359268,7.23033089650446,5.5146986366197,5.44698610231015,5.21995362044413,5.93257755904723,6.47530834913642,3.46272441251751,11.0723318193697,28.0483547606892,52.2698994390878,136.718101588554,0,0,2.95394953340702,0,0.245976877086227,12.6960179620909,9.98727597218493,4.49607013030478,3.71957197923034,2.40729957412177,12.3807156017923,81.1149132518071,14.4331342025273,1.97081688457631,14.7934954737135,13.2817131940188,13.8895653772983,10.6542325251375,0.790204397959275,0.858486162094873,0,0,0,0.93733833986777,10.5828740765282,3.68615252830205,8.86629374758198,10.1721878479887,16.8688378832693,0,0.704387472105808,5.59785911960085,4.32359860250884,4.67097003677606,0.825472625798197,2.67391897890794,3.51652341630141,11.9750712215894,1.33675740514321,1.20137223137567,1.71495859578347,7.84917590417525,6.10344096366592,6.3070925806017,17.4516816273,211.017303052611,19.441963308788,22.0728636765443,35.3625285498645,33.6941660283406,53.9026701688457,42.0947042845437,12.7250414355751,23.3327290318321,19.7577680827385,16.2868092146868,12.4387182059891,8.71147060226772,12.6604538365026,6.97226766880235,19.4947332805011,0,0,0,56.7910907515051,122.902271342502,19.9691667057006,57.4781787470289,55.8895597337043,18.2642182504693,0,0,0,0,5.08189248444927,0,6.95959931499926,0.837581326671744,7.01732626818479,0,0,0,58.8919160251872,49.0167110638484,44.2161988630569,75.493422735683,79.9361869811285,55.511250091945,110.347212923136,177.558198839354,100.059301784633,108.64672485713,60.4445294667247,71.9039757312642,42.7467383182968,15.6640925970192,26.7651870572468,0,0,0,3.03127571446259,3.32870879020994,7.55975733324201,111.64851351845,66.295572460443,95.7050922016781,94.1822747029402,82.3848670997393,91.6867350518563,124.671175813792,31.9214066171497,53.8012027698775,29.6479033209851,21.2894315965285,44.1599438147845,0.483437798366489,15.6395046836562,2.85451065701279,30.081385419127,42.2451509775584,77.3634048260602,0.902399225814824,1.00119938235739,6.27479815341484,5.84556898613043,1.68882606228601,19.3346752920524,14.4579649485038,7.55705706357488,21.5918153766405,9.7540717515787,15.0506932156456,2.54876273045038,3.3243040357149,3.80587083027703,0,0,0.512900250232778,3.28014645699706,6.18218949862176,7.31591182698828,0.366277859273374,0.990113999047056,3.44559322797703,13.0012049207304,56.2393754454558,27.6478254315469,26.9585079950628,27.7841651254294,14.3350035383912,24.4918158299664,46.5503587464674,22.4998296378506,54.0424456375696,4.62797763010739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| ||
|short_description=p2@PTRF | |short_description=p2@PTRF | ||
}} | }} |
Latest revision as of 14:48, 24 September 2015
Short description: | p2@PTRF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PTRF_5end |
Coexpression cluster: | C1780_Mesenchymal_tenocyte_Osteoblast_Smooth_mature_Synoviocyte_Chondrocyte |
Association with transcript: | 50bp_to_uc010wgi.1_5end |
EntrezGene: | PTRF |
HGNC: | 9688 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.50e-23 | 76 |
mesodermal cell | 2.23e-21 | 121 |
muscle precursor cell | 2.39e-19 | 58 |
myoblast | 2.39e-19 | 58 |
multi-potent skeletal muscle stem cell | 2.39e-19 | 58 |
muscle cell | 2.40e-18 | 55 |
smooth muscle cell | 2.65e-15 | 43 |
smooth muscle myoblast | 2.65e-15 | 43 |
electrically responsive cell | 7.13e-15 | 61 |
electrically active cell | 7.13e-15 | 61 |
vascular associated smooth muscle cell | 1.08e-11 | 32 |
fat cell | 2.16e-10 | 15 |
embryonic cell | 8.77e-10 | 250 |
skin fibroblast | 6.02e-08 | 23 |
preadipocyte | 4.74e-07 | 12 |
stromal cell | 9.43e-07 | 28 |