FFCP PHASE1:Hg19::chr7:99070499..99070523,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:99070499..99070523,+ to FFCP PHASE1:Hg19::chr7:99070499..99070523,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=285989 | |EntrezGene=285989 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27801 | |HGNC=27801 | ||
|TSSclassifier=strong | |||
|UniProt=C9J487,C9J3R7,C9JUE3,A6NH61,Q5FWF6 | |UniProt=C9J487,C9J3R7,C9JUE3,A6NH61,Q5FWF6 | ||
|association_with_transcript=0bp_to_ENST00000448667,ENST00000481472,ENST00000483089,ENST00000488485,ENST00000493485,NM_001013258,NM_213603,uc003uqp.2,uc003uqq.1,uc010lfw.1_5end | |||
|cluster_id=chr7:99070499..99070523,+ | |||
|description=CAGE_peak_1_at_ZNF789_5end | |||
|id=chr7:99070499..99070523,+ | |||
|ontology_enrichment_celltype=CL:0000542!2.93e-09!53;CL:0000051!2.93e-09!53;CL:0000838!5.80e-09!52 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,2.81e-09,53;CL:0000051,2.81e-09,53;CL:0000838,5.57e-09,52 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!3.75e-14!235;DOID:14566!4.80e-14!239;DOID:2531!1.59e-13!51;DOID:0060083!1.59e-13!51;DOID:0050686!2.19e-11!137;DOID:1240!3.00e-11!39;DOID:8692!1.02e-09!31;DOID:0050687!2.89e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.51e-09;31!DOID:1240;9.35e-09;39!DOID:2531;3.16e-08;51!DOID:0060083;3.16e-08;51 | |||
|ontology_enrichment_disease_v019_2=DOID:162,3.74e-14,235;DOID:14566,4.80e-14,239;DOID:2531,1.59e-13,51;DOID:0060083,1.59e-13,51;DOID:0050686,2.19e-11,137;DOID:1240,3.00e-11,39;DOID:8692,1.02e-09,31;DOID:0050687,2.88e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0001049!9.76e-13!57;UBERON:0005068!9.76e-13!57;UBERON:0006241!9.76e-13!57;UBERON:0007135!9.76e-13!57;UBERON:0002780!1.08e-11!41;UBERON:0001890!1.08e-11!41;UBERON:0006240!1.08e-11!41;UBERON:0000073!1.32e-11!94;UBERON:0001016!1.32e-11!94;UBERON:0003080!5.18e-11!42;UBERON:0000955!9.33e-11!69;UBERON:0006238!9.33e-11!69;UBERON:0001017!1.84e-10!82;UBERON:0005743!4.51e-10!86;UBERON:0002616!6.89e-10!59;UBERON:0001893!1.92e-09!34;UBERON:0002020!2.30e-09!34;UBERON:0003528!2.30e-09!34;UBERON:0002791!3.21e-09!33;UBERON:0001869!3.98e-09!32;UBERON:0002346!1.14e-07!90;UBERON:0007023!1.25e-07!115;UBERON:0000956!1.40e-07!25;UBERON:0000203!1.40e-07!25;UBERON:0003075!1.84e-07!86;UBERON:0007284!1.84e-07!86;UBERON:0002619!2.05e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;6.94e-09;41!UBERON:0001890;6.94e-09;41!UBERON:0003528;1.23e-08;34!UBERON:0002020;1.23e-08;34!UBERON:0002791;2.55e-08;32!UBERON:0001869;2.69e-08;32!UBERON:0001893;2.79e-08;34!UBERON:0000073;2.97e-08;53!UBERON:0002616;2.97e-08;53!UBERON:0000956;1.09e-07;25!UBERON:0000203;1.09e-07;25!UBERON:0002619;1.46e-07;22!UBERON:0001950;9.04e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.34e-13,56;UBERON:0005068,2.34e-13,56;UBERON:0006241,2.34e-13,56;UBERON:0007135,2.34e-13,56;UBERON:0000073,1.50e-12,53;UBERON:0002616,1.50e-12,53;UBERON:0001016,1.86e-12,89;UBERON:0002780,1.08e-11,41;UBERON:0001890,1.08e-11,41;UBERON:0003080,1.08e-11,41;UBERON:0006240,1.08e-11,41;UBERON:0000955,3.07e-11,68;UBERON:0006238,3.07e-11,68;UBERON:0001017,6.88e-11,81;UBERON:0001893,1.92e-09,34;UBERON:0003528,2.30e-09,34;UBERON:0002020,2.30e-09,34;UBERON:0001869,3.98e-09,32;UBERON:0002791,5.86e-09,32;UBERON:0002346,5.24e-08,86;UBERON:0003075,8.30e-08,82;UBERON:0007284,8.30e-08,82;UBERON:0000956,1.40e-07,25;UBERON:0000203,1.40e-07,25;UBERON:0002619,2.05e-07,22;UBERON:0007023,2.33e-07,114;UBERON:0003056,3.62e-07,61;UBERON:0011216,6.67e-07,223 | |||
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| ||
|short_description=p1@ZNF789 | |||
}} | }} |
Latest revision as of 15:53, 24 September 2015
Short description: | p1@ZNF789 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZNF789_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000448667, ENST00000481472, ENST00000483089, ENST00000488485, ENST00000493485, NM_001013258, NM_213603, uc003uqp.2, uc003uqq.1, uc010lfw.1_5end |
EntrezGene: | ZNF789 |
HGNC: | 27801 |
UniProt: | C9J487C9J3R7C9JUE3A6NH61Q5FWF6 |
Genome view: | ZENBU |
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CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 2.81e-09 | 53 |
common lymphoid progenitor | 2.81e-09 | 53 |
lymphoid lineage restricted progenitor cell | 5.57e-09 | 52 |
Ontology term | p-value | n |
---|---|---|
neural tube | 2.34e-13 | 56 |
neural rod | 2.34e-13 | 56 |
future spinal cord | 2.34e-13 | 56 |
neural keel | 2.34e-13 | 56 |
regional part of nervous system | 1.50e-12 | 53 |
regional part of brain | 1.50e-12 | 53 |
nervous system | 1.86e-12 | 89 |
regional part of forebrain | 1.08e-11 | 41 |
forebrain | 1.08e-11 | 41 |
anterior neural tube | 1.08e-11 | 41 |
future forebrain | 1.08e-11 | 41 |
brain | 3.07e-11 | 68 |
future brain | 3.07e-11 | 68 |
central nervous system | 6.88e-11 | 81 |
telencephalon | 1.92e-09 | 34 |
brain grey matter | 2.30e-09 | 34 |
gray matter | 2.30e-09 | 34 |
cerebral hemisphere | 3.98e-09 | 32 |
regional part of telencephalon | 5.86e-09 | 32 |
neurectoderm | 5.24e-08 | 86 |
neural plate | 8.30e-08 | 82 |
presumptive neural plate | 8.30e-08 | 82 |
cerebral cortex | 1.40e-07 | 25 |
pallium | 1.40e-07 | 25 |
regional part of cerebral cortex | 2.05e-07 | 22 |
adult organism | 2.33e-07 | 114 |
pre-chordal neural plate | 3.62e-07 | 61 |
organ system subdivision | 6.67e-07 | 223 |
Ontology term | p-value | n |
---|---|---|
cancer | 3.74e-14 | 235 |
disease of cellular proliferation | 4.80e-14 | 239 |
hematologic cancer | 1.59e-13 | 51 |
immune system cancer | 1.59e-13 | 51 |
organ system cancer | 2.19e-11 | 137 |
leukemia | 3.00e-11 | 39 |
myeloid leukemia | 1.02e-09 | 31 |
cell type cancer | 2.88e-07 | 143 |