FFCP PHASE1:Hg19::chr8:102504651..102504683,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79977 | |EntrezGene=79977 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2799 | |HGNC=2799 | ||
|TSSclassifier=strong | |||
|UniProt=Q6ISB3 | |UniProt=Q6ISB3 | ||
|association_with_transcript=0bp_to_ENST00000251808,ENST00000472106,ENST00000521085,NM_024915,uc010mbt.1,uc010mbu.2,uc011lhi.1_5end | |association_with_transcript=0bp_to_ENST00000251808,ENST00000472106,ENST00000521085,NM_024915,uc010mbt.1,uc010mbu.2,uc011lhi.1_5end | ||
|cluster_id=chr8:102504651..102504683,+ | |||
|coexpression_cluster_id=C1541 | |coexpression_cluster_id=C1541 | ||
|description=CAGE_peak_1_at_GRHL2_5end | |description=CAGE_peak_1_at_GRHL2_5end | ||
|id=chr8:102504651..102504683,+ | |id=chr8:102504651..102504683,+ | ||
|ontology_enrichment_celltype=CL:0000066!4.59e-24!254;CL:0002076!2.85e-20!43;CL:0000223!1.38e-16!59;CL:0002251!2.87e-10!21;CL:0002368!2.53e-09!13;CL:0002159!4.71e-07!13 | |ontology_enrichment_celltype=CL:0000066!4.59e-24!254;CL:0002076!2.85e-20!43;CL:0000223!1.38e-16!59;CL:0002251!2.87e-10!21;CL:0002368!2.53e-09!13;CL:0002159!4.71e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0002076;3.69e-17;42!CL:0002368;2.35e-10;13!CL:0002251;6.94e-10;20!CL:0000349;1.90e-07;19!CL:0002159;4.71e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.12e-23,253;CL:0002076,3.32e-21,42;CL:0000223,7.33e-16,58;CL:0002368,2.70e-10,13;CL:0002251,7.02e-10,20;CL:0000349,1.90e-07,19;CL:0002159,4.55e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000223;1.57e-08;58!UBERON:0006595;6.11e-08;86 | |||
|ontology_enrichment_disease=DOID:305!1.20e-16!106;DOID:1749!1.79e-15!14;DOID:0050687!2.53e-10!143;DOID:299!7.60e-10!25 | |ontology_enrichment_disease=DOID:305!1.20e-16!106;DOID:1749!1.79e-15!14;DOID:0050687!2.53e-10!143;DOID:299!7.60e-10!25 | ||
|ontology_enrichment_disease_v019=DOID:1749;2.47e-15;14!DOID:299;4.08e-10;25!DOID:5093;7.71e-07;4!DOID:1612;7.71e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.41e-16,106;DOID:1749,2.47e-15,14;DOID:0050687,1.27e-10,143;DOID:299,4.13e-10,25;DOID:5093,7.55e-07,4;DOID:1612,7.55e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.31e-26!169;UBERON:0000925!2.31e-26!169;UBERON:0006595!2.31e-26!169;UBERON:0001007!2.13e-19!155;UBERON:0001555!2.13e-19!155;UBERON:0007026!2.13e-19!155;UBERON:0004921!1.81e-16!129;UBERON:0004185!1.81e-16!129;UBERON:0000077!2.22e-15!130;UBERON:0000464!5.61e-15!104;UBERON:0001004!9.31e-14!72;UBERON:0000466!1.57e-13!126;UBERON:0005631!2.53e-12!14;UBERON:0000158!2.53e-12!14;UBERON:0005911!1.23e-10!82;UBERON:0000161!6.65e-10!35;UBERON:0003124!2.85e-09!7;UBERON:0005153!3.08e-09!37;UBERON:0005156!3.25e-09!59;UBERON:0000990!3.25e-09!59;UBERON:0001041!4.56e-09!98;UBERON:0000344!7.60e-09!12;UBERON:0005181!8.45e-09!35;UBERON:0000065!1.06e-08!53;UBERON:0003133!2.03e-08!48;UBERON:0005178!2.08e-08!34;UBERON:0002224!2.08e-08!34;UBERON:0002553!5.39e-08!70;UBERON:0000166!5.44e-08!21;UBERON:0000915!6.03e-08!52;UBERON:0004175!9.71e-08!25;UBERON:0000062!1.20e-07!511;UBERON:0005409!1.39e-07!35;UBERON:0005177!1.54e-07!107;UBERON:0000160!5.97e-07!27;UBERON:0003135!6.02e-07!11;UBERON:0000468!8.51e-07!659;UBERON:0003729!8.97e-07!5;UBERON:0003101!9.26e-07!22;UBERON:0000079!9.26e-07!22 | |ontology_enrichment_uberon=UBERON:0004119!2.31e-26!169;UBERON:0000925!2.31e-26!169;UBERON:0006595!2.31e-26!169;UBERON:0001007!2.13e-19!155;UBERON:0001555!2.13e-19!155;UBERON:0007026!2.13e-19!155;UBERON:0004921!1.81e-16!129;UBERON:0004185!1.81e-16!129;UBERON:0000077!2.22e-15!130;UBERON:0000464!5.61e-15!104;UBERON:0001004!9.31e-14!72;UBERON:0000466!1.57e-13!126;UBERON:0005631!2.53e-12!14;UBERON:0000158!2.53e-12!14;UBERON:0005911!1.23e-10!82;UBERON:0000161!6.65e-10!35;UBERON:0003124!2.85e-09!7;UBERON:0005153!3.08e-09!37;UBERON:0005156!3.25e-09!59;UBERON:0000990!3.25e-09!59;UBERON:0001041!4.56e-09!98;UBERON:0000344!7.60e-09!12;UBERON:0005181!8.45e-09!35;UBERON:0000065!1.06e-08!53;UBERON:0003133!2.03e-08!48;UBERON:0005178!2.08e-08!34;UBERON:0002224!2.08e-08!34;UBERON:0002553!5.39e-08!70;UBERON:0000166!5.44e-08!21;UBERON:0000915!6.03e-08!52;UBERON:0004175!9.71e-08!25;UBERON:0000062!1.20e-07!511;UBERON:0005409!1.39e-07!35;UBERON:0005177!1.54e-07!107;UBERON:0000160!5.97e-07!27;UBERON:0003135!6.02e-07!11;UBERON:0000468!8.51e-07!659;UBERON:0003729!8.97e-07!5;UBERON:0003101!9.26e-07!22;UBERON:0000079!9.26e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0004921;4.80e-10;33!UBERON:0005631;6.82e-09;10!UBERON:0000158;6.82e-09;10!UBERON:0005178;1.27e-08;34!UBERON:0002224;1.27e-08;34!UBERON:0005409;2.21e-08;22!UBERON:0000974;3.16e-08;6!UBERON:0000344;3.48e-08;20!UBERON:0005911;4.98e-08;36!UBERON:0001555;7.22e-08;54!UBERON:0005181;7.94e-08;35!UBERON:0004807;1.99e-07;22!UBERON:0000478;2.08e-07;24!UBERON:0002048;2.17e-07;22!UBERON:0000117;2.17e-07;22!UBERON:0000171;2.17e-07;22!UBERON:0000170;2.17e-07;22!UBERON:0000160;4.29e-07;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,4.38e-26,160;UBERON:0000925,4.38e-26,160;UBERON:0006595,4.38e-26,160;UBERON:0001007,7.74e-19,145;UBERON:0001555,7.74e-19,145;UBERON:0007026,7.74e-19,145;UBERON:0004921,1.48e-15,118;UBERON:0005631,1.01e-13,14;UBERON:0000158,1.01e-13,14;UBERON:0001004,4.04e-13,74;UBERON:0005911,1.65e-11,82;UBERON:0005153,1.16e-10,37;UBERON:0003124,3.55e-10,7;UBERON:0000065,6.22e-10,54;UBERON:0005178,1.09e-09,34;UBERON:0002224,1.09e-09,34;UBERON:0005181,3.04e-09,35;UBERON:0000161,4.27e-09,36;UBERON:0001008,6.34e-09,48;UBERON:0005157,9.07e-09,47;UBERON:0000915,1.01e-08,52;UBERON:0006554,1.72e-08,47;UBERON:0005156,3.21e-08,59;UBERON:0000990,3.21e-08,59;UBERON:0000344,3.57e-08,20;UBERON:0001041,5.51e-08,87;UBERON:0004175,6.78e-08,25;UBERON:0000478,2.11e-07,24;UBERON:0002048,2.32e-07,22;UBERON:0000117,2.32e-07,22;UBERON:0000171,2.32e-07,22;UBERON:0000170,2.32e-07,22;UBERON:0005597,2.32e-07,22;UBERON:0000118,2.32e-07,22;UBERON:0000160,3.80e-07,17;UBERON:0003133,4.15e-07,48;UBERON:0005409,5.60e-07,25;UBERON:0000974,5.87e-07,10;UBERON:0005177,9.07e-07,101 | |||
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| ||
|short_description=p1@GRHL2 | |short_description=p1@GRHL2 | ||
}} | }} |
Latest revision as of 21:36, 24 September 2015
Short description: | p1@GRHL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GRHL2_5end |
Coexpression cluster: | C1541_amniotic_Amniotic_MCF7_Placental_chorionic_oral_acantholytic |
Association with transcript: | 0bp_to_ENST00000251808, ENST00000472106, ENST00000521085, NM_024915, uc010mbt.1, uc010mbu.2, uc011lhi.1_5end |
EntrezGene: | GRHL2 |
HGNC: | 2799 |
UniProt: | Q6ISB3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.12e-23 | 253 |
endo-epithelial cell | 3.32e-21 | 42 |
endodermal cell | 7.33e-16 | 58 |
respiratory epithelial cell | 2.70e-10 | 13 |
epithelial cell of alimentary canal | 7.02e-10 | 20 |
extraembryonic cell | 1.90e-07 | 19 |
general ecto-epithelial cell | 4.55e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.41e-16 | 106 |
squamous cell carcinoma | 2.47e-15 | 14 |
cell type cancer | 1.27e-10 | 143 |
adenocarcinoma | 4.13e-10 | 25 |
thoracic cancer | 7.55e-07 | 4 |
breast cancer | 7.55e-07 | 4 |