FFCP PHASE1:Hg19::chr11:107879607..107879702,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:107879607..107879702,+ to FFCP PHASE1:Hg19::chr11:107879607..107879702,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8065 | |EntrezGene=8065 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2556 | |HGNC=2556 | ||
|TSSclassifier=strong | |||
|UniProt=E9PP19 | |UniProt=E9PP19 | ||
|association_with_transcript=0bp_to_ENST00000526303,ENST00000532064_5end | |||
|cluster_id=chr11:107879607..107879702,+ | |||
|description=CAGE_peak_1_at_CUL5_5end | |||
|id=chr11:107879607..107879702,+ | |||
|ontology_enrichment_celltype=CL:0000037!5.89e-12!172;CL:0000566!5.89e-12!172;CL:0000988!2.81e-10!182;CL:0002032!3.51e-10!165;CL:0000837!3.51e-10!165;CL:0000738!4.02e-09!140;CL:0002087!8.31e-09!119;CL:0002031!8.35e-09!124;CL:0000542!2.07e-07!53;CL:0000051!2.07e-07!53;CL:0000838!2.67e-07!52 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,8.31e-13,168;CL:0000988,1.88e-11,177;CL:0002032,5.80e-11,161;CL:0000837,5.80e-11,161;CL:0000738,6.34e-10,136;CL:0002087,1.13e-09,115;CL:0002031,1.20e-09,120;CL:0000542,2.07e-07,53;CL:0000051,2.07e-07,53;CL:0000838,2.67e-07,52 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.71e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.24e-19!115;UBERON:0001049!4.01e-16!57;UBERON:0005068!4.01e-16!57;UBERON:0006241!4.01e-16!57;UBERON:0007135!4.01e-16!57;UBERON:0002780!4.32e-16!41;UBERON:0001890!4.32e-16!41;UBERON:0006240!4.32e-16!41;UBERON:0003080!3.91e-15!42;UBERON:0002616!1.04e-14!59;UBERON:0000073!2.21e-14!94;UBERON:0001016!2.21e-14!94;UBERON:0000955!4.63e-14!69;UBERON:0006238!4.63e-14!69;UBERON:0001017!6.77e-14!82;UBERON:0005743!3.47e-13!86;UBERON:0001893!6.60e-13!34;UBERON:0002020!1.78e-12!34;UBERON:0003528!1.78e-12!34;UBERON:0002791!2.05e-12!33;UBERON:0001869!3.28e-12!32;UBERON:0002346!4.20e-12!90;UBERON:0003075!3.09e-11!86;UBERON:0007284!3.09e-11!86;UBERON:0000153!1.13e-10!129;UBERON:0007811!1.13e-10!129;UBERON:0000956!1.15e-09!25;UBERON:0000203!1.15e-09!25;UBERON:0002619!1.19e-09!22;UBERON:0000033!1.65e-09!123;UBERON:0000924!3.63e-09!173;UBERON:0006601!3.63e-09!173;UBERON:0001950!6.69e-09!20;UBERON:0003056!9.92e-09!61;UBERON:0004121!1.78e-08!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;8.27e-12;41!UBERON:0001890;8.27e-12;41!UBERON:0001893;2.94e-11;34!UBERON:0001869;3.11e-11;32!UBERON:0002791;3.48e-11;32!UBERON:0003528;6.01e-11;34!UBERON:0002020;6.01e-11;34!UBERON:0000073;4.41e-10;53!UBERON:0002616;4.41e-10;53!UBERON:0002619;1.08e-09;22!UBERON:0000956;1.12e-09;25!UBERON:0000203;1.12e-09;25!UBERON:0001950;6.41e-09;20!UBERON:0001016;1.16e-07;83!UBERON:0000955;1.97e-07;68!UBERON:0001017;2.19e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.68e-19,114;UBERON:0001049,6.08e-17,56;UBERON:0005068,6.08e-17,56;UBERON:0006241,6.08e-17,56;UBERON:0007135,6.08e-17,56;UBERON:0000073,2.21e-16,53;UBERON:0002616,2.21e-16,53;UBERON:0002780,4.32e-16,41;UBERON:0001890,4.32e-16,41;UBERON:0003080,4.32e-16,41;UBERON:0006240,4.32e-16,41;UBERON:0001016,1.16e-15,89;UBERON:0000955,1.03e-14,68;UBERON:0006238,1.03e-14,68;UBERON:0001017,1.77e-14,81;UBERON:0001893,6.60e-13,34;UBERON:0003528,1.78e-12,34;UBERON:0002020,1.78e-12,34;UBERON:0001869,3.28e-12,32;UBERON:0002791,4.44e-12,32;UBERON:0002346,1.59e-11,86;UBERON:0003075,1.15e-10,82;UBERON:0007284,1.15e-10,82;UBERON:0011216,3.88e-10,223;UBERON:0000956,1.15e-09,25;UBERON:0000203,1.15e-09,25;UBERON:0002619,1.19e-09,22;UBERON:0003056,3.16e-09,61;UBERON:0001950,6.69e-09,20;UBERON:0004121,8.01e-09,171;UBERON:0000924,8.01e-09,171;UBERON:0006601,8.01e-09,171 | |||
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| ||
|short_description=p1@CUL5 | |||
}} | }} |
Latest revision as of 23:04, 24 September 2015
Short description: | p1@CUL5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CUL5_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000526303, ENST00000532064_5end |
EntrezGene: | CUL5 |
HGNC: | 2556 |
UniProt: | E9PP19 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 8.31e-13 | 168 |
hematopoietic cell | 1.88e-11 | 177 |
hematopoietic oligopotent progenitor cell | 5.80e-11 | 161 |
hematopoietic multipotent progenitor cell | 5.80e-11 | 161 |
leukocyte | 6.34e-10 | 136 |
nongranular leukocyte | 1.13e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 1.20e-09 | 120 |
lymphocyte | 2.07e-07 | 53 |
common lymphoid progenitor | 2.07e-07 | 53 |
lymphoid lineage restricted progenitor cell | 2.67e-07 | 52 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.68e-19 | 114 |
neural tube | 6.08e-17 | 56 |
neural rod | 6.08e-17 | 56 |
future spinal cord | 6.08e-17 | 56 |
neural keel | 6.08e-17 | 56 |
regional part of nervous system | 2.21e-16 | 53 |
regional part of brain | 2.21e-16 | 53 |
regional part of forebrain | 4.32e-16 | 41 |
forebrain | 4.32e-16 | 41 |
anterior neural tube | 4.32e-16 | 41 |
future forebrain | 4.32e-16 | 41 |
nervous system | 1.16e-15 | 89 |
brain | 1.03e-14 | 68 |
future brain | 1.03e-14 | 68 |
central nervous system | 1.77e-14 | 81 |
telencephalon | 6.60e-13 | 34 |
brain grey matter | 1.78e-12 | 34 |
gray matter | 1.78e-12 | 34 |
cerebral hemisphere | 3.28e-12 | 32 |
regional part of telencephalon | 4.44e-12 | 32 |
neurectoderm | 1.59e-11 | 86 |
neural plate | 1.15e-10 | 82 |
presumptive neural plate | 1.15e-10 | 82 |
organ system subdivision | 3.88e-10 | 223 |
cerebral cortex | 1.15e-09 | 25 |
pallium | 1.15e-09 | 25 |
regional part of cerebral cortex | 1.19e-09 | 22 |
pre-chordal neural plate | 3.16e-09 | 61 |
neocortex | 6.69e-09 | 20 |
ectoderm-derived structure | 8.01e-09 | 171 |
ectoderm | 8.01e-09 | 171 |
presumptive ectoderm | 8.01e-09 | 171 |