FFCP PHASE1:Hg19::chr12:100378449..100378454,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56899 | |EntrezGene=56899 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24600 | |HGNC=24600 | ||
|TSSclassifier=strong | |||
|UniProt=F8VVQ4,Q7Z6G8 | |UniProt=F8VVQ4,Q7Z6G8 | ||
|association_with_transcript=-17bp_to_ENST00000549866,NM_152788,uc001tge.1,uc001tgf.1,uc009ztt.1_5end | |association_with_transcript=-17bp_to_ENST00000549866,NM_152788,uc001tge.1,uc001tgf.1,uc009ztt.1_5end | ||
|cluster_id=chr12:100378449..100378454,- | |||
|description=CAGE_peak_46_at_ANKS1B_5end | |description=CAGE_peak_46_at_ANKS1B_5end | ||
|id=chr12:100378449..100378454,- | |id=chr12:100378449..100378454,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.22e-14;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p46@ANKS1B | |short_description=p46@ANKS1B | ||
}} | }} |
Latest revision as of 07:01, 25 September 2015
Short description: | p46@ANKS1B |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_46_at_ANKS1B_5end |
Coexpression cluster: | NA |
Association with transcript: | -17bp_to_ENST00000549866, NM_152788, uc001tge.1, uc001tgf.1, uc009ztt.1_5end |
EntrezGene: | ANKS1B |
HGNC: | 24600 |
UniProt: | F8VVQ4Q7Z6G8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amygdala | 3.81e-21 | 2 |
neocortex | 9.30e-18 | 20 |
regional part of cerebral cortex | 2.71e-16 | 22 |
cerebral cortex | 1.62e-14 | 25 |
pallium | 1.62e-14 | 25 |
duodenum | 2.09e-14 | 2 |
regional part of nervous system | 1.93e-12 | 53 |
regional part of brain | 1.93e-12 | 53 |
neural tube | 7.99e-12 | 56 |
neural rod | 7.99e-12 | 56 |
future spinal cord | 7.99e-12 | 56 |
neural keel | 7.99e-12 | 56 |
regional part of telencephalon | 1.28e-11 | 32 |
cerebral hemisphere | 1.28e-11 | 32 |
brain grey matter | 5.30e-11 | 34 |
gray matter | 5.30e-11 | 34 |
telencephalon | 5.30e-11 | 34 |
brain | 9.44e-10 | 68 |
future brain | 9.44e-10 | 68 |
regional part of forebrain | 2.66e-09 | 41 |
forebrain | 2.66e-09 | 41 |
anterior neural tube | 2.66e-09 | 41 |
future forebrain | 2.66e-09 | 41 |
limbic system | 2.74e-09 | 5 |
parietal lobe | 2.97e-09 | 5 |
occipital lobe | 3.22e-09 | 5 |
small intestine | 3.49e-09 | 4 |
central nervous system | 2.54e-08 | 81 |
neural plate | 2.54e-08 | 82 |
presumptive neural plate | 2.54e-08 | 82 |
cerebellum | 5.54e-08 | 6 |
rhombic lip | 5.54e-08 | 6 |
neurectoderm | 5.76e-08 | 86 |
nervous system | 1.45e-07 | 89 |
temporal lobe | 5.38e-07 | 6 |