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FFCP PHASE1:Mm9::chr5:136108566..136108597,+: Difference between revisions

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(Created page with "{{FFCP |id=chr5:136108566..136108597,+ |short_description=p1@Rhbdd2 |description=CAGE_peak_1_at_Rhbdd2_5end |association_with_transcript=0bp_to_ENSMUST00000129134,ENSMUST0...")
 
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{{FFCP
{{FFCP
|id=chr5:136108566..136108597,+
|DHSsupport=NA
|short_description=p1@Rhbdd2
|DPIdataset=NA
|description=CAGE_peak_1_at_Rhbdd2_5end
|association_with_transcript=0bp_to_ENSMUST00000129134,ENSMUST00000130647,ENSMUST00000144633_5end
|EntrezGene=215160
|EntrezGene=215160
|HGNC=
|HGNC=
|MCL_coexpression_id=347
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=0bp_to_ENSMUST00000129134,ENSMUST00000130647,ENSMUST00000144633_5end
|cluster_id=chr5:136108566..136108597,+
|description=CAGE_peak_1_at_Rhbdd2_5end
|id=chr5:136108566..136108597,+
|ontology_enrichment_celltype=CL:0000117!2.15e-08!23;CL:0000337!2.15e-08!23;CL:0000221!5.20e-08!44;CL:0000133!5.20e-08!44;CL:0002319!7.27e-08!43
|ontology_enrichment_celltype_v019_2=CL:0000117,2.15e-08,23;CL:0000337,2.15e-08,23;CL:0000221,5.20e-08,44;CL:0000133,5.20e-08,44;CL:0002319,7.27e-08,43
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!2.29e-25!71;UBERON:0003075!2.29e-25!71;UBERON:0007284!2.29e-25!71;UBERON:0001017!4.52e-25!73;UBERON:0005743!4.52e-25!73;UBERON:0000073!6.12e-24!75;UBERON:0001016!6.12e-24!75;UBERON:0004121!1.90e-23!102;UBERON:0000924!1.90e-23!102;UBERON:0006601!1.90e-23!102;UBERON:0001049!5.50e-23!52;UBERON:0005068!5.50e-23!52;UBERON:0006241!5.50e-23!52;UBERON:0007135!5.50e-23!52;UBERON:0000033!2.69e-22!63;UBERON:0000955!5.17e-22!50;UBERON:0006238!5.17e-22!50;UBERON:0002616!2.12e-21!49;UBERON:0003056!1.17e-17!49;UBERON:0003080!5.28e-17!40;UBERON:0002780!2.44e-16!39;UBERON:0001890!2.44e-16!39;UBERON:0006240!2.44e-16!39;UBERON:0002020!5.91e-14!34;UBERON:0007811!4.02e-13!86;UBERON:0000153!3.44e-12!94;UBERON:0002791!3.30e-11!29;UBERON:0003528!3.30e-11!29;UBERON:0001893!3.30e-11!29;UBERON:0004111!1.07e-07!122;UBERON:0002619!2.78e-07!17;UBERON:0000956!2.91e-07!21;UBERON:0001869!2.91e-07!21;UBERON:0000203!2.91e-07!21;UBERON:0000025!3.07e-07!114;UBERON:0002021!4.88e-07!10;UBERON:0000411!4.88e-07!10;UBERON:0001950!4.88e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.52e-25,73;UBERON:0000073,1.73e-24,54;UBERON:0001016,6.12e-24,75;UBERON:0002346,2.30e-23,64;UBERON:0003075,2.30e-23,64;UBERON:0007284,2.30e-23,64;UBERON:0001049,5.50e-23,52;UBERON:0005068,5.50e-23,52;UBERON:0006241,5.50e-23,52;UBERON:0007135,5.50e-23,52;UBERON:0004121,3.24e-21,95;UBERON:0000924,3.24e-21,95;UBERON:0006601,3.24e-21,95;UBERON:0000955,5.52e-20,47;UBERON:0006238,5.52e-20,47;UBERON:0002616,2.19e-19,46;UBERON:0010371,7.90e-19,73;UBERON:0003056,1.17e-17,49;UBERON:0010314,3.48e-17,92;UBERON:0003080,5.28e-17,40;UBERON:0002780,2.44e-16,39;UBERON:0001890,2.44e-16,39;UBERON:0006240,2.44e-16,39;UBERON:0002020,5.91e-14,34;UBERON:0003528,3.30e-11,29;UBERON:0002791,3.30e-11,29;UBERON:0001893,3.30e-11,29;UBERON:0004111,1.07e-07,122;UBERON:0002619,2.78e-07,17;UBERON:0000956,2.91e-07,21;UBERON:0001869,2.91e-07,21;UBERON:0000203,2.91e-07,21;UBERON:0000025,3.07e-07,114;UBERON:0002021,4.88e-07,10;UBERON:0000411,4.88e-07,10;UBERON:0001950,4.88e-07,10
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2,24.6016555223487,19.3329560071024,20.9088296014469,19.8709933009022,21.848024114341,23.9695021603474,21.7257431846745,20.0903208602279,22.3682152711293,25.3661822407886,17.7924689792335,16.876766026624,19.6395700227488,20.4072521094815,22.1332524392919,15.3737982625938,21.7441322689397,20.9718688851422,22.9504914784706,23.618460513145,15.8005560314089,26.3542779877213,18.1798394181744,18.4487568628469,17.1865627840782,14.9011016085949,13.7022812452764,14.9166422446323,11.4092088441407,12.34550267811,11.1917065501893,11.9873193309895,10.3908788971556,11.6876902181569,16.7780483875256,21.9766093840324,22.24903643915,19.4746154982331,35.546885301923,20.2697073487277,19.2309205480628,20.5793643915903,23.0723167856267,46.8744029372165,56.6200040903828,42.3942679945154,58.6019351791975,53.4364365421101,63.4530873807348,51.9767325178491,58.0914352159244,57.549085940994,68.8621214629921,10.1711600632493,35.9122386060928,22.0246351422833,16.531256760644,11.1094976192831,13.052889099951,20.8911924133518,17.9250499797838,21.1806678330598,21.9846574234504,25.8548885888045,21.3147765766266,21.2566221956633,18.631319349817,20.7342042929764,22.8620971815875,20.04798838846,16.5901929598786,23.0768104449852,17.9582682563965,18.5149396288124,18.6349596467304,16.9289694862598,19.6217662453643,20.0452980284654,20.0536620703273,16.2805895856768,21.5717163379031,15.8890813199658,17.9565526930476,19.8120480267371,20.7844457812439,27.8277109355389,22.4658419719651,21.9913536518501,26.2301106834843,20.1181183263051,18.4789106481537,14.1553365730944,16.5443564339637,14.3758058084661
|phase1_expression=24.1824759128239,11.1672130444596,15.9249733786338,14.215817931421,17.0304548181758,13.5982210248631,15.1848216387092,18.7228818990286,12.248618827195,14.9801296846076,31.6753241217184,25.9259516734843,17.6336751829142,20.7186353733024,6.99530499812892,8.50396123037269,5.59649502502517,11.8298312009339,13.9856722277854,10.1853516431527,31.2108874854426,17.8723712161594,19.5899841854202,15.1992801653736,16.2880589557691,17.2269589234506,15.0766698655676,9.9116767035509,17.1021077510736,15.8778981748756,25.7207392360153,38.1018404075779,20.9122027778754,15.8481681015439,17.3310971850765,16.2909952451323,14.4960242946282,4.60384793810598,3.1253413780952,3.66466620781659,2.35292595212406,2.73218193983378,6.311634589405,18.6327290603854,18.0450937570736,18.7217687204915,37.5547845287059,39.0265029920999,38.8844543440015,46.8576056769023,20.7179904005537,38.8131923785423,6.37573903019398,8.70434570413613,10.0828139742739,14.9210472900849,10.601737277734,11.3447860301037,43.7003555456731,41.7902873624906,40.5652098243955,13.2149367506962,26.6788438833342,26.5470416598013,41.5323872278129,34.8135256323589,46.7376172408711,62.2433654620918,19.1825782770684,23.7610451463776,21.0324961351382,68.2705852725091,55.6588723198066,20.9459266657571,15.9103481890272,22.0612508786405,58.361416929676,65.2482297615309,62.9786786350598,46.951518431949,36.0461315793494,42.7148963856543,70.0749327493466,83.2888662846886,75.0239396584138,57.4525741673652,48.5487431524941,40.6350791899155,20.2946198132933,14.0563101798621,20.5803786978191,12.0459342777394,27.19885334831,19.9690180905992,29.2399387851451,30.0178014355215,21.3475518600263,13.6344258062446,12.2099422163348,17.666978725517,25.0701287202491,20.5322363862909,30.5766287647975,56.8853362522665,29.2262905365139,35.4703811665138,35.8922355960496,28.6601538094841,31.5904218049549,36.8136504880765,23.5940044401945,31.3599442661505,34.1310935938967,29.6923601888666,23.6353301342767,27.0183171358802,43.2591193535154,33.5470508054195,14.153768831198,12.7795811458453,7.28777010919299,9.21262980956922,27.9587641827183,32.2058876712702,24.0863712835473,17.1156226989756,10.3041007075091,8.39863823390771,10.1656181658452,65.3087187805027,61.3050807776959,26.7643770000401,67.6176605547955,49.6087987220841,71.0635112393695,52.4039279708857,15.0722258498468,13.9335807083304,38.4138592819186,37.2482084919059,27.7156543510559,20.2313851901456,26.1090088217756,19.1395118651358,23.5406287063594,24.8540617352609,26.7986932240824,35.1836584205061,27.8082710883366,20.4234566581245,24.8091085071168,19.7276159184817,13.6243152120543,16.0195996600197,14.1989674121481,28.4619001550445,7.72434506044558,7.46308930632674,7.672414483681,20.5054514810147,21.8109235782419,19.9868888221726,21.7805156738393,21.2505370287196,18.8205877722601,16.7424440220294,21.9984189147688,16.3471479314037,16.455984991348,19.3717607613332,14.2681104800706,13.7427988179812,19.7595103761946,12.2127841071938,69.8162629232902,27.8871499547861,23.1293148088659,25.1228038330367,22.82184280727,20.669063795579,17.3971072784826,23.5969723809311,20.9035361214178,21.1150444984941,19.9302205848695,13.6700132420929,17.3421294072186,17.9060824837036,17.9366960149591,22.4704852163555,15.9942156907274,13.3424653080426,24.6568271239006,22.5069569841166,20.2873924211545,26.6783239477362,22.304536024277,23.565635483147,29.0888070771584,32.3266224075329,35.6387112199921,22.9518724894549,31.7204310983249,14.181833985868,10.8107447312262,8.31989815823959,10.1430060694251,12.0588579876208,13.2405442926338,20.7141218964584,38.7503191992335,24.9850886001154,10.0637744569148,19.3513292787622,23.0907878104775,22.9846778931872,16.8633568710597,19.2977408545347,31.0385359479896,21.2230381182943,16.2964976442026,15.9560380628677,19.9486711045227,16.5831194867398,16.901098502907,13.2690880543303,17.339865851681,15.723992965063,17.2211150150086,20.8106409688987,18.3046080777849,19.238324791341,22.6186925908908,20.668415985111,19.6705709207614,16.5562047782839,55.8716053157516,43.0166889793386,15.9016897015375,9.59389523376617,21.4545589203055,21.0836921920185,22.1886099664783,19.1175038362042,19.6062833192507,16.1353622549635,15.7876173653209,21.9191893433484,16.602086673754,53.6606598424418,30.5171183197778,26.1756437390865,22.6412873501471,28.8697715201937,25.2215762845929,22.8213797985683,25.9998258989686,16.2200368590072,22.147641966058,19.3684143204674,19.898978573953,18.9037539328303,16.3988794056972,14.5376908650475,14.7586052004998,13.4076206222643,54.1298973148523,28.0895306688844,38.2901703996953,41.7957218311605,47.8818630834139,47.0893678469466,49.5292552012384,71.2447980928162,24.1711859305622,35.7996199759856,20.0680842230015,19.9512366059191,12.4327608555847,13.8719727334758,8.71418111222896,15.7575263755259,23.3184669303881,48.396003824743,12.4735742982432,13.6215332855727,11.1116716421827,10.7370020492674,9.97867862363484,10.2950177942935,22.267174329195,21.5525236578433,20.1771961754459,27.6854479224383,26.2558874672342,24.6016555223487,19.3329560071024,20.9088296014469,19.8709933009022,21.848024114341,23.9695021603474,21.7257431846745,20.0903208602279,22.3682152711293,25.3661822407886,17.7924689792335,16.876766026624,19.6395700227488,20.4072521094815,22.1332524392919,15.3737982625938,21.7441322689397,20.9718688851422,22.9504914784706,23.618460513145,15.8005560314089,26.3542779877213,18.1798394181744,18.4487568628469,17.1865627840782,14.9011016085949,13.7022812452764,14.9166422446323,11.4092088441407,12.34550267811,11.1917065501893,11.9873193309895,10.3908788971556,11.6876902181569,16.7780483875256,21.9766093840324,22.24903643915,19.4746154982331,35.546885301923,20.2697073487277,19.2309205480628,20.5793643915903,23.0723167856267,46.8744029372165,56.6200040903828,42.3942679945154,58.6019351791975,53.4364365421101,63.4530873807348,51.9767325178491,58.0914352159244,57.549085940994,68.8621214629921,10.1711600632493,35.9122386060928,22.0246351422833,16.531256760644,11.1094976192831,13.052889099951,20.8911924133518,17.9250499797838,21.1806678330598,21.9846574234504,25.8548885888045,21.3147765766266,21.2566221956633,18.631319349817,20.7342042929764,22.8620971815875,20.04798838846,16.5901929598786,23.0768104449852,17.9582682563965,18.5149396288124,18.6349596467304,16.9289694862598,19.6217662453643,20.0452980284654,20.0536620703273,16.2805895856768,21.5717163379031,15.8890813199658,17.9565526930476,19.8120480267371,20.7844457812439,27.8277109355389,22.4658419719651,21.9913536518501,26.2301106834843,20.1181183263051,18.4789106481537,14.1553365730944,16.5443564339637,14.3758058084661
|short_description=p1@Rhbdd2
}}
}}

Latest revision as of 13:28, 25 September 2015

Short description:p1@Rhbdd2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rhbdd2_5end
Coexpression cluster:MCL_coexpression_mm9:347
Association with transcript: 0bp_to_ENSMUST00000129134, ENSMUST00000130647, ENSMUST00000144633_5end
EntrezGene:Rhbdd2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rhbdd2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G724.18
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I511.17
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I615.92
CD326+ enterocyte, pool1.CNhs13542.11848-124I314.22
CD326+ enterocyte, pool2.CNhs13197.11849-124I417.03
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I713.60
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I815.18
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E918.72
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E712.25
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F214.98
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E631.68
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F125.93
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E417.63
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E820.72
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A17.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A38.50
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A55.60
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A211.83
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A413.99
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A610.19
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A331.21
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H217.87
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I919.59
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D115.20
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D216.29
GP2+ M cell, pool1.CNhs13228.11845-124H917.23
GP2+ M cell, pool2.CNhs13231.11846-124I115.08
GP2+ M cell, pool3.CNhs13240.11847-124I29.91
Ileum epithelium, pool1.CNhs13199.10252-104B917.10
Ileum epithelium, pool2.CNhs13232.10253-104C115.88
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C825.72
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I338.10
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G620.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F517.33
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F616.29
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F714.50
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G84.60
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.13
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H33.66
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G92.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.73
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H46.31
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D818.63
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D918.05
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B318.72
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B737.55
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C239.03
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B838.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C346.86
Mouse Astrocytes, donor2.CNhs12078.11552-120C420.72
Mouse Astrocytes, donor3.CNhs12107.11633-122C438.81
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A26.38
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I98.70
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A110.08
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C114.92
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E110.60
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C511.34
Mouse Granule cells, donor1.CNhs12131.11713-123C343.70
Mouse Granule cells, donor2.CNhs12357.11731-123E341.79
Mouse Granule cells, donor3.CNhs12108.11636-122C740.57
Mouse Meningeal cells, donor1.CNhs12132.11716-123C613.21
Mouse Meningeal cells, donor3.CNhs12109.11639-122D126.68
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C726.55
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E741.53
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D234.81
Mouse Microglia, donor1.CNhs12629.11718-123C846.74
Mouse Microglia, donor2.CNhs12634.11736-123E862.24
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D519.18
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F523.76
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D921.03
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F168.27
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D555.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D220.95
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F215.91
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D622.06
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D358.36
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F365.25
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D762.98
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D446.95
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F436.05
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D842.71
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E470.07
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E583.29
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I675.02
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D657.45
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F648.55
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E140.64
Mouse Schwann, donor1.CNhs12507.11728-123D920.29
Mouse Schwann, donor2.CNhs12573.11746-123F914.06
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G320.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F712.05
Mouse hepatocyte, donor1.CNhs13078.11714-123C427.20
Mouse hepatocyte, donor3.CNhs12615.11637-122C819.97
Mouse hepatocyte, donor6.CNhs13090.11822-124F429.24
Mouse hepatocyte, donor8.CNhs13091.11824-124F630.02
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A721.35
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I713.63
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E312.21
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I817.67
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G625.07
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H120.53
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I830.58
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B656.89
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G129.23
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G235.47
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G335.89
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B628.66
accessory axillary lymph node, adult.CNhs10475.1063-29H931.59
adrenal gland, adult.CNhs10508.49-24D736.81
adrenal gland, embryo E14.CNhs11038.406-44C523.59
adrenal gland, embryo E16.CNhs11004.1254-43D631.36
adrenal gland, embryo E17.CNhs11043.1263-45I134.13
adrenal gland, embryo E18.CNhs11026.1262-18F529.69
adrenal gland, neonate N00.CNhs11191.1311-23C123.64
adrenal gland, neonate N25.CNhs11223.1377-27I327.02
amnion, adult pregnant day17.5.CNhs10488.583-22A843.26
aorta, adult.CNhs10498.46-23H133.55
bone (os femoris), adult.CNhs10483.56-12G214.15
bone (os femoris), neonate N02.CNhs11227.1985-43F512.78
bone (os femoris), neonate N16.CNhs11225.1525-43A67.29
bone (os femoris), neonate N20.CNhs11195.1350-25C39.21
cecum, adult.CNhs10467.37-13H427.96
cerebellum, adult.CNhs10494.15-8B232.21
cerebellum, neonate N30.CNhs11135.1395-42I224.09
colon, adult.CNhs10468.36-18H717.12
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C710.30
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D18.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D410.17
corpora quadrigemina, adult.CNhs10501.16-22A465.31
corpus striatum, adult.CNhs10487.19-21D861.31
corpus striatum, neonate N00.CNhs11226.630-43F126.76
cortex, adult.CNhs10473.12-14D567.62
cortex, neonate N30.CNhs11107.1392-42F249.61
diencephalon, adult.CNhs10482.20-12F271.06
diencephalon, neonate N30.CNhs11201.1388-42B252.40
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B115.07
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A213.93
epididymis, adult.CNhs10490.58-23B238.41
eyeball, adult.CNhs10484.31-12G437.25
eyeball, embryo E12.CNhs11016.345-16C627.72
eyeball, embryo E14.CNhs10521.399-16E220.23
eyeball, embryo E15.CNhs10593.426-16C926.11
eyeball, embryo E17.CNhs11023.1261-18D419.14
eyeball, neonate N00.CNhs11207.633-15C623.54
eyeball, neonate N01.CNhs11140.1532-43E724.85
eyeball, neonate N02.CNhs11205.1551-44G826.80
eyeball, neonate N16.CNhs11188.777-19A235.18
forelimb, embryo E11.CNhs10596.335-25E227.81
forelimb, embryo E12.CNhs10600.359-14H220.42
forelimb, embryo E13.CNhs10589.384-1E224.81
forelimb, embryo E14.CNhs10577.413-26A819.73
forelimb, embryo E15.CNhs11007.437-20E713.62
forelimb, embryo E17.CNhs10598.1517-43C416.02
forelimb, embryo E18.CNhs11008.1520-43B514.20
gonad, embryo E13.CNhs11044.1564-45I628.46
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C87.72
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D27.46
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D57.67
heart, embryo E11.CNhs10586.331-24E920.51
heart, embryo E12.CNhs11015.353-12F521.81
heart, embryo E13.CNhs11013.376-3I919.99
heart, embryo E14.CNhs10597.403-26D421.78
heart, embryo E15.CNhs11017.431-16C821.25
heart, embryo E16.CNhs11021.457-17C618.82
heart, embryo E17.CNhs11025.479-18E516.74
heart, embryo E18.CNhs11030.1283-20G322.00
heart, neonate N00.CNhs11213.639-21E316.35
heart, neonate N03.CNhs11221.1349-25I216.46
heart, neonate N10.CNhs11118.749-24G119.37
heart, neonate N16.CNhs11209.782-15G114.27
heart, neonate N20.CNhs11127.821-26I613.74
heart, neonate N25.CNhs11196.1351-25D319.76
heart, neonate N30.CNhs11202.1390-42D212.21
hippocampus, adult.CNhs10478.13-16E869.82
hippocampus, neonate N00.CNhs11228.627-43G127.89
intestinal mucosa, adult.CNhs10506.860-29I323.13
intestine, adult.CNhs10496.178-9A325.12
intestine, embryo E12.CNhs11019.1251-16I522.82
intestine, embryo E13.CNhs11010.381-16D520.67
intestine, embryo E15.CNhs10602.976-16D817.40
intestine, embryo E16.CNhs10585.463-22H423.60
intestine, embryo E17.CNhs10582.482-18D320.90
intestine, embryo E18.CNhs10526.1289-20F721.12
intestine, neonate N00.CNhs11126.644-26D119.93
intestine, neonate N01.CNhs11192.1322-23E913.67
intestine, neonate N06.CNhs11102.688-20B817.34
intestine, neonate N07.CNhs11095.720-20F217.91
intestine, neonate N10.CNhs11098.755-23A517.94
intestine, neonate N20.CNhs11187.827-18D122.47
intestine, neonate N25.CNhs11121.1352-25E315.99
intestine, neonate N30.CNhs11131.1384-42G113.34
kidney, embryo E14.CNhs10606.411-4I924.66
kidney, embryo E15.CNhs10997.434-16F822.51
kidney, embryo E16.CNhs10584.464-22A520.29
kidney, embryo E17.CNhs11028.483-18I226.68
kidney, embryo E18.CNhs11001.1288-20C722.30
kidney, neonate N00.CNhs11214.646-21G723.57
kidney, neonate N10.CNhs11206.758-6D529.09
kidney, neonate N20.CNhs11113.832-19I132.33
kidney, neonate N25.CNhs11122.1353-25F335.64
kidney, neonate N30.CNhs11203.1385-42H122.95
liver, adult pregnant day01.CNhs10466.508-5B231.72
liver, embryo E12.CNhs10601.355-15F814.18
liver, embryo E13.CNhs10524.378-3H610.81
liver, embryo E14.CNhs10594.409-16E18.32
liver, embryo E15.CNhs10520.433-16D710.14
liver, embryo E16.CNhs10523.462-17F512.06
liver, embryo E17.CNhs10510.481-18A313.24
liver, embryo E18.CNhs10579.499-43G420.71
liver, neonate N00.CNhs11117.641-24F438.75
liver, neonate N03.CNhs11123.1345-25G224.99
liver, neonate N06.CNhs11101.684-20A810.06
liver, neonate N07.CNhs11103.716-20H219.35
liver, neonate N10.CNhs11115.751-24B923.09
liver, neonate N20.CNhs11220.823-25A322.98
liver, neonate N25.CNhs11198.1368-26H116.86
liver, neonate N30.CNhs11106.1382-42D119.30
lung, adult.CNhs10474.28-22B131.04
lung, embryo E12.CNhs10522.354-16G221.22
lung, embryo E14.CNhs10604.404-26F816.30
lung, embryo E15.CNhs11020.432-17C515.96
lung, embryo E16.CNhs10998.458-17B619.95
lung, embryo E17.CNhs10605.480-44A616.58
lung, embryo E18.CNhs10583.1287-20I616.90
lung, neonate N00.CNhs11224.640-42C613.27
lung, neonate N06.CNhs11212.683-20E517.34
lung, neonate N07.CNhs11111.715-19A315.72
lung, neonate N10.CNhs11219.750-23E617.22
lung, neonate N20.CNhs11109.822-18A420.81
lung, neonate N25.CNhs11119.1359-25C718.30
lung, neonate N30.CNhs11133.1394-42H219.24
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A122.62
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A120.67
mammary gland, adult lactating day02.CNhs10480.595-22B619.67
mammary gland, adult pregnant day19.CNhs10476.588-5H216.56
medulla oblongata, adult.CNhs10477.17-12C255.87
medulla oblongata, neonate N30.CNhs11200.1396-42A343.02
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C715.90
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C29.59
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E121.45
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E221.08
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E322.19
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D719.12
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D819.61
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D916.14
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D415.79
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D521.92
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D616.60
olfactory brain, adult.CNhs10489.18-22I953.66
ovary, adult.CNhs10507.91-2I730.52
ovary, embryo E18.CNhs11040.505-44H726.18
ovary, neonate N00.CNhs11217.1299-22I422.64
oviduct, adult pregnant day01.CNhs10500.988-6G628.87
pancreas, adult.CNhs10486.34-16E425.22
pancreas, embryo E14.CNhs11012.405-44F422.82
pancreas, embryo E15.CNhs11042.1556-45F226.00
pancreas, embryo E16.CNhs11003.460-26E516.22
pancreas, embryo E17.CNhs10599.1558-45G322.15
pancreas, embryo E18.CNhs10580.1535-43I719.37
pancreas, neonate N00.CNhs11105.645-26G919.90
pancreas, neonate N01.CNhs11138.1531-43D718.90
pancreas, neonate N02.CNhs11139.1539-43D816.40
pancreas, neonate N16.CNhs11136.787-43B614.54
pancreas, neonate N25.CNhs11094.1555-45E214.76
pancreas, neonate N30.CNhs11182.1548-44H513.41
pituitary gland, adult.CNhs10493.21-1G854.13
pituitary gland, embryo E12.CNhs11018.346-16E628.09
pituitary gland, embryo E13.CNhs11009.370-44C738.29
pituitary gland, embryo E14.CNhs11037.398-44A541.80
pituitary gland, embryo E15.CNhs10592.427-16B947.88
pituitary gland, embryo E16.CNhs11036.449-43F647.09
pituitary gland, embryo E17.CNhs11039.1265-44F549.53
pituitary gland, neonate N00.CNhs11190.1308-22E971.24
placenta, adult pregnant day10.CNhs10472.539-13I724.17
placenta, adult pregnant day17.CNhs10464.577-18G335.80
prostate, adult.CNhs10470.859-1F820.07
skin, adult.CNhs10492.30-1C319.95
skin, neonate N00.CNhs11124.650-25G412.43
skin, neonate N03.CNhs11215.662-22H313.87
skin, neonate N06.CNhs11097.693-20I58.71
skin, neonate N10.CNhs11108.762-6C415.76
small intestine, neonate N16.CNhs11114.790-21I123.32
spinal cord, adult.CNhs10505.24-13C948.40
spleen, adult.CNhs10465.25-2G212.47
spleen, embryo E16.CNhs11035.461-43C113.62
spleen, embryo E18.CNhs11011.1271-21F211.11
spleen, neonate N10.CNhs11116.752-24D110.74
spleen, neonate N20.CNhs11112.824-19H19.98
spleen, neonate N25.CNhs11099.1354-25G310.30
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C622.27
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C921.55
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D320.18
stomach, adult.CNhs10503.33-1H627.69
stomach, embryo E12.CNhs10588.356-43E326.26
stomach, embryo E15.CNhs10603.1252-16G824.60
stomach, embryo E16.CNhs11022.459-17D419.33
stomach, embryo E17.CNhs11006.1035-18D520.91
stomach, embryo E18.CNhs10999.1286-20C619.87
stomach, neonate N03.CNhs11193.1340-24B821.85
stomach, neonate N07.CNhs11210.718-18A923.97
stomach, neonate N25.CNhs11104.1355-25E421.73
stomach, neonate N30.CNhs11134.1386-42I120.09
submandibular gland, adult.CNhs10469.59-29C122.37
testis, adult.CNhs10504.57-7G525.37
testis, embryo E13.CNhs11031.389-23F517.79
testis, embryo E15.CNhs11034.443-27C516.88
testis, embryo E16.CNhs11033.470-26G519.64
testis, embryo E17.CNhs11029.486-18I520.41
testis, embryo E18.CNhs11027.503-18G522.13
testis, neonate N00.CNhs11189.1300-22B715.37
testis, neonate N07.CNhs11222.726-26I421.74
testis, neonate N10.CNhs11204.763-44D920.97
testis, neonate N20.CNhs11110.839-18H322.95
testis, neonate N30.CNhs11130.1391-42E223.62
thymus, adult.CNhs10471.38-12B515.80
thymus, embryo E14.CNhs11041.402-44I426.35
thymus, embryo E15.CNhs11005.430-45I218.18
thymus, embryo E16.CNhs11002.456-26C518.45
thymus, embryo E17.CNhs10581.478-18C117.19
thymus, embryo E18.CNhs10595.1273-19G414.90
thymus, neonate N02.CNhs11181.1541-43F813.70
thymus, neonate N03.CNhs11137.2104-43C714.92
thymus, neonate N06.CNhs11197.681-26C411.41
thymus, neonate N07.CNhs11211.713-19D312.35
thymus, neonate N10.CNhs11194.748-24E411.19
thymus, neonate N20.CNhs11186.820-7A211.99
thymus, neonate N25.CNhs11125.1362-25G710.39
thymus, neonate N30.CNhs11132.1393-42G211.69
tongue, adult.CNhs10499.32-1B416.78
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H321.98
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F722.25
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G519.47
urinary bladder, adult.CNhs10481.879-12E435.55
uterus, adult pregnant day19.CNhs10497.590-15F520.27
uterus, adult.CNhs10509.92-27E519.23
vagina, adult.CNhs10502.89-27D520.58
vesicular gland, adult.CNhs10491.51-27F823.07
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A146.87
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A256.62
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A342.39
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D758.60
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A453.44
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A563.45
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A651.98
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A758.09
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A857.55
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A968.86
whole body, embryo E11.CNhs11014.324-5I810.17
whole body, embryo E12.CNhs10587.857-27C935.91
whole body, embryo E13.CNhs10512.372-23H222.02
whole body, embryo E14.5.CNhs10578.420-27D216.53
whole body, embryo E14.CNhs10519.395-14B111.11
whole body, embryo E16.CNhs10514.453-14F213.05
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G520.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G517.93
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G521.18
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G521.98
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G525.85
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G521.31
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G521.26
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G518.63
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G520.73
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G522.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G520.05
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G516.59
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G523.08
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G517.96
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G518.51
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G518.63
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G516.93
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G519.62
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G520.05
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G520.05
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G516.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G521.57
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G515.89
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G517.96
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G519.81
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G520.78
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G527.83
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G522.47
whole body, embryo E17.5.CNhs10513.490-9F921.99
whole body, embryo E17.CNhs10517.475-3I526.23
whole body, embryo E18.CNhs10516.493-3B320.12
whole body, neonate N00.CNhs10525.657-19C218.48
whole body, neonate N01.CNhs10576.659-23C614.16
whole body, neonate N06.CNhs10515.692-21D116.54
whole body, neonate N10.CNhs10518.761-6B414.38





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.15e-0823
neuroblast (sensu Vertebrata)2.15e-0823
ectodermal cell5.20e-0844
neurectodermal cell5.20e-0844
neural cell7.27e-0843

Uber anatomy
Ontology termp-valuen
central nervous system4.52e-2573
regional part of nervous system1.73e-2454
nervous system6.12e-2475
neurectoderm2.30e-2364
neural plate2.30e-2364
presumptive neural plate2.30e-2364
neural tube5.50e-2352
neural rod5.50e-2352
future spinal cord5.50e-2352
neural keel5.50e-2352
ectoderm-derived structure3.24e-2195
ectoderm3.24e-2195
presumptive ectoderm3.24e-2195
brain5.52e-2047
future brain5.52e-2047
regional part of brain2.19e-1946
ecto-epithelium7.90e-1973
pre-chordal neural plate1.17e-1749
structure with developmental contribution from neural crest3.48e-1792
anterior neural tube5.28e-1740
regional part of forebrain2.44e-1639
forebrain2.44e-1639
future forebrain2.44e-1639
gray matter5.91e-1434
brain grey matter3.30e-1129
regional part of telencephalon3.30e-1129
telencephalon3.30e-1129
anatomical conduit1.07e-07122
regional part of cerebral cortex2.78e-0717
cerebral cortex2.91e-0721
cerebral hemisphere2.91e-0721
pallium2.91e-0721
tube3.07e-07114
occipital lobe4.88e-0710
visual cortex4.88e-0710
neocortex4.88e-0710
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