FFCP PHASE1:Mm9::chr11:69709025..69709062,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=216859 | |EntrezGene=216859 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=36 | |||
|TSSclassifier=NA | |||
|UniProt=Q8K2H4 | |UniProt=Q8K2H4 | ||
|association_with_transcript=0bp_to_ENSMUST00000001631,NM_153788,uc007jsg.1,uc007jsi.1_5end | |association_with_transcript=0bp_to_ENSMUST00000001631,NM_153788,uc007jsg.1,uc007jsi.1_5end | ||
|cluster_id=chr11:69709025..69709062,- | |||
|description=CAGE_peak_1_at_Acap1_5end | |description=CAGE_peak_1_at_Acap1_5end | ||
|id=chr11:69709025..69709062,- | |id=chr11:69709025..69709062,- | ||
|ontology_enrichment_celltype=CL:0000838!1.93e-08!12;CL:0000084!9.34e-08!11;CL:0000827!9.34e-08!11;CL:0000988!2.22e-07!32;CL:0002032!2.22e-07!32;CL:0000037!2.22e-07!32;CL:0000566!2.22e-07!32;CL:0000837!2.22e-07!32;CL:0000542!3.46e-07!13;CL:0000051!3.46e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.92e-10,32;CL:0002032,2.92e-10,32;CL:0000037,2.92e-10,32;CL:0000837,2.92e-10,32;CL:0000838,4.75e-10,12;CL:0000084,3.32e-09,11;CL:0000827,3.32e-09,11;CL:0000542,7.20e-09,13;CL:0000051,7.20e-09,13;CL:0002031,8.24e-08,25;CL:0000791,1.01e-07,9;CL:0000789,1.01e-07,9;CL:0002420,1.01e-07,9;CL:0002419,1.01e-07,9;CL:0000790,1.01e-07,9;CL:0000624,5.77e-07,8 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.59e-12!48;UBERON:0004177!7.60e-12!29;UBERON:0002405!2.25e-11!70;UBERON:0002390!6.75e-11!45;UBERON:0003061!6.75e-11!45;UBERON:0005057!6.50e-10!51;UBERON:0003408!1.55e-09!24;UBERON:0002370!3.40e-09!23;UBERON:0000974!3.40e-09!23;UBERON:0004807!3.40e-09!23;UBERON:0005058!3.40e-09!23;UBERON:0003351!3.40e-09!23;UBERON:0009113!3.40e-09!23;UBERON:0003295!3.40e-09!23;UBERON:0009722!3.40e-09!23;UBERON:0005562!3.40e-09!23;UBERON:0007690!3.40e-09!23;UBERON:0006562!2.69e-08!24;UBERON:0001557!2.69e-08!24;UBERON:0001042!2.69e-08!24;UBERON:0008814!2.69e-08!24;UBERON:0009145!2.69e-08!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,6.84e-17,48;UBERON:0002405,6.84e-17,48;UBERON:0004177,2.97e-15,29;UBERON:0005057,2.97e-15,29;UBERON:0002390,2.99e-15,45;UBERON:0003061,2.99e-15,45;UBERON:0000077,2.92e-13,35;UBERON:0003408,2.24e-12,24;UBERON:0002370,5.93e-12,23;UBERON:0000974,5.93e-12,23;UBERON:0004807,5.93e-12,23;UBERON:0005058,5.93e-12,23;UBERON:0003351,5.93e-12,23;UBERON:0009113,5.93e-12,23;UBERON:0003295,5.93e-12,23;UBERON:0009722,5.93e-12,23;UBERON:0005562,5.93e-12,23;UBERON:0007690,5.93e-12,23;UBERON:0006562,4.40e-11,24;UBERON:0001557,4.40e-11,24;UBERON:0001042,4.40e-11,24;UBERON:0008814,4.40e-11,24;UBERON:0009145,4.40e-11,24;UBERON:0004119,5.49e-10,118;UBERON:0000925,5.49e-10,118;UBERON:0006595,5.49e-10,118;UBERON:0001007,6.08e-10,116;UBERON:0001555,6.08e-10,116;UBERON:0007026,6.08e-10,116;UBERON:0001041,6.69e-10,80;UBERON:0004921,3.20e-09,114;UBERON:0000072,6.71e-09,27;UBERON:0001004,1.48e-08,42;UBERON:0000065,3.53e-08,41;UBERON:0005911,4.92e-07,69;UBERON:0003929,9.67e-07,55 | |||
|phase1_expression=0,0,0,0.30246421130683,0,0,0,116.727484391185,23.3709278771767,27.6196141059952,21.5734639964136,13.5612670292072,115.218091243701,139.348121455882,15.6561588053361,19.2351504020335,13.2916756844348,101.894279410711,86.3820931716154,99.7315681725371,4.93251082876205,78.6384333511012,75.7479388502913,13.1193786690593,12.6175104586944,0,0.430761996159075,0.430942465371778,1.52018735565099,1.76421090831952,1.10865255327652,0,0,0,0,0,0.204169356262369,210.102878629928,82.040211174999,156.010075704192,188.234076169925,185.105326423739,201.97230686096,0,0,0,0,0,0,0,0,0,128.689258846284,110.980407727736,85.7039187813283,0,0,0,0,0,0.633831403506179,0,0,0,0,0,0.299600110518405,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12033341332915,0.0755715601067855,0,0,0,0,0,0,6.60088774619234,0,0,0,0,0,0,0,0,0,0,7.30776830201984,58.5199617042608,2.3750742250372,0.520455980298408,0.913396434936424,0.691846491768175,0.452167921657868,0.705532242814229,0.628332956648377,0.247194967734374,1.3013942122792,19.4614321428972,2.75003644910596,14.575540218386,13.5765070877862,1.86391761218122,0,0,5.8755122697976,32.9491592391281,19.196887391789,26.9388881394897,0.149790639404823,0,0,0,0,0,0.162241263067758,0,19.4074874151745,17.1851475734899,0.420883711772948,0.130120442962704,0,0,0.30140963567143,0,0.12811372028485,0,0,0.215567992932842,0,0,0.657587197282725,0.278047249225598,0.348252166522167,0.411564272815887,0.995171334092466,14.0442637462647,16.2129181482271,17.0498099637356,0.207125772535502,0.234526059981096,0.36012412292203,0,0.196764231747404,0,0.232533944750408,0,0.700592054203017,0.329119699826961,0.656669856316381,0.486412857275134,1.16959989940266,0.439100230582101,0.939444931322602,0,0,13.2167513193519,2.3800550999719,0,0.232236671860439,0.257734922644187,0,0.444756087689741,0.190225626112559,2.84717436926707,1.15289268306808,3.2673577144035,1.1937388322469,1.75467678407208,4.49409704327111,2.59365659849633,1.99141273254367,0,0.114248512609729,0,0.203651327845314,0.387904974335251,0,0.379419222745544,0.885660887877613,0.470996183524124,0.246794327843601,1.48226313543574,1.83529616287703,2.16214894624523,1.79889689907883,2.63718157805054,6.02942899381042,5.85639459097266,8.0554918486227,6.80967952455149,1.92192989231657,1.43768206527355,2.97712758134803,1.5601883655728,1.01031551178845,0.179397413521912,1.92977408545347,11.2699446001629,0.37898282354097,0,0.169745085775188,0,1.17254380209271,0,0,1.89162172927429,2.43611158613652,3.18909537314974,8.02930242107116,10.0157289482219,6.07526046042349,0,0,3.93411418415229,4.69092468718045,0,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.99358059645788,0.712262414669021,0.162886959353576,2.47455184458803,0,0,0.302323556964751,0.377210159511796,0.885905678642318,0.614870295887855,0.516856586336442,1.09060118843252,1.42598951353889,4.10847785316561,1.05418608574999,0,0.340439605753788,0,0.129358683782755,0.214337035031592,0,0.178368817602071,0,0,5.16277757740163,0.63549621259146,0.220528398054962,1.6488625294148,0.484393280087717,0.542816324353403,0.477489376012546,0.656563598980245,2.33184669303881,0,39.1294317027083,6.3979929068599,9.07453184111587,17.5182665014363,27.202151316484,39.1210676183154,54.3930975980337,62.6982506409988,61.0843884215553,0,0.158167996790568,0.813277868507395,0.108005340821801,0.836353184057875,0,0.539457385539283,1.1571483801547,1.04702376793612,2.46268449254406,7.45607175704311,0.56369293868419,0.299033092087958,0.330916980914195,0.583353565032143,0.516639293910924,0.675824501963113,0.469428954583016,0.39061315453185,0.314578033277133,0,0.576060012515731,94.8033361884535,21.8943232513377,25.9858721627013,40.4053759460943,46.7259675692127,53.8426471457228,62.8622200989437,67.7894929731309,69.76781691417,64.3947516234749,71.8890700025673,71.631542343718,97.1739600567328,115.591256257572,0,6.43759264784788,14.8027863405635,5.37230772365051,1.35232715822533,3.37828455812128,2.74727436400898,1.2862102744744,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0.729320151204882,0.209613162627982,0.367687016900028,1.33348036680969,1.44224540067226,1.60459604795908,1.51618327058278,1.01391719956096,0.754505365544305,1.12369808963859,1.02440243847791,0.861532034334199,1.90517476513229,1.15884325944855,1.15745532278223,1.23625770240992,0.441596760403192,1.37147700954166,2.66213709239006,0.953744759789284,1.0174249164263,0.846984423737976,0.846146078916765,1.28049581010941,0.526139422875686,1.08643291076689,1.68342681497322,0.949080144993393,0.886540341380071,1.22769312950907,1.54936841185966,1.15743966588685,0.999242311751784,2.10538447600868,0.859484216193193,0.765153328275374,2.20591419119516,4.40548887678801 | |phase1_expression=0,0,0,0.30246421130683,0,0,0,116.727484391185,23.3709278771767,27.6196141059952,21.5734639964136,13.5612670292072,115.218091243701,139.348121455882,15.6561588053361,19.2351504020335,13.2916756844348,101.894279410711,86.3820931716154,99.7315681725371,4.93251082876205,78.6384333511012,75.7479388502913,13.1193786690593,12.6175104586944,0,0.430761996159075,0.430942465371778,1.52018735565099,1.76421090831952,1.10865255327652,0,0,0,0,0,0.204169356262369,210.102878629928,82.040211174999,156.010075704192,188.234076169925,185.105326423739,201.97230686096,0,0,0,0,0,0,0,0,0,128.689258846284,110.980407727736,85.7039187813283,0,0,0,0,0,0.633831403506179,0,0,0,0,0,0.299600110518405,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12033341332915,0.0755715601067855,0,0,0,0,0,0,6.60088774619234,0,0,0,0,0,0,0,0,0,0,7.30776830201984,58.5199617042608,2.3750742250372,0.520455980298408,0.913396434936424,0.691846491768175,0.452167921657868,0.705532242814229,0.628332956648377,0.247194967734374,1.3013942122792,19.4614321428972,2.75003644910596,14.575540218386,13.5765070877862,1.86391761218122,0,0,5.8755122697976,32.9491592391281,19.196887391789,26.9388881394897,0.149790639404823,0,0,0,0,0,0.162241263067758,0,19.4074874151745,17.1851475734899,0.420883711772948,0.130120442962704,0,0,0.30140963567143,0,0.12811372028485,0,0,0.215567992932842,0,0,0.657587197282725,0.278047249225598,0.348252166522167,0.411564272815887,0.995171334092466,14.0442637462647,16.2129181482271,17.0498099637356,0.207125772535502,0.234526059981096,0.36012412292203,0,0.196764231747404,0,0.232533944750408,0,0.700592054203017,0.329119699826961,0.656669856316381,0.486412857275134,1.16959989940266,0.439100230582101,0.939444931322602,0,0,13.2167513193519,2.3800550999719,0,0.232236671860439,0.257734922644187,0,0.444756087689741,0.190225626112559,2.84717436926707,1.15289268306808,3.2673577144035,1.1937388322469,1.75467678407208,4.49409704327111,2.59365659849633,1.99141273254367,0,0.114248512609729,0,0.203651327845314,0.387904974335251,0,0.379419222745544,0.885660887877613,0.470996183524124,0.246794327843601,1.48226313543574,1.83529616287703,2.16214894624523,1.79889689907883,2.63718157805054,6.02942899381042,5.85639459097266,8.0554918486227,6.80967952455149,1.92192989231657,1.43768206527355,2.97712758134803,1.5601883655728,1.01031551178845,0.179397413521912,1.92977408545347,11.2699446001629,0.37898282354097,0,0.169745085775188,0,1.17254380209271,0,0,1.89162172927429,2.43611158613652,3.18909537314974,8.02930242107116,10.0157289482219,6.07526046042349,0,0,3.93411418415229,4.69092468718045,0,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.99358059645788,0.712262414669021,0.162886959353576,2.47455184458803,0,0,0.302323556964751,0.377210159511796,0.885905678642318,0.614870295887855,0.516856586336442,1.09060118843252,1.42598951353889,4.10847785316561,1.05418608574999,0,0.340439605753788,0,0.129358683782755,0.214337035031592,0,0.178368817602071,0,0,5.16277757740163,0.63549621259146,0.220528398054962,1.6488625294148,0.484393280087717,0.542816324353403,0.477489376012546,0.656563598980245,2.33184669303881,0,39.1294317027083,6.3979929068599,9.07453184111587,17.5182665014363,27.202151316484,39.1210676183154,54.3930975980337,62.6982506409988,61.0843884215553,0,0.158167996790568,0.813277868507395,0.108005340821801,0.836353184057875,0,0.539457385539283,1.1571483801547,1.04702376793612,2.46268449254406,7.45607175704311,0.56369293868419,0.299033092087958,0.330916980914195,0.583353565032143,0.516639293910924,0.675824501963113,0.469428954583016,0.39061315453185,0.314578033277133,0,0.576060012515731,94.8033361884535,21.8943232513377,25.9858721627013,40.4053759460943,46.7259675692127,53.8426471457228,62.8622200989437,67.7894929731309,69.76781691417,64.3947516234749,71.8890700025673,71.631542343718,97.1739600567328,115.591256257572,0,6.43759264784788,14.8027863405635,5.37230772365051,1.35232715822533,3.37828455812128,2.74727436400898,1.2862102744744,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0.729320151204882,0.209613162627982,0.367687016900028,1.33348036680969,1.44224540067226,1.60459604795908,1.51618327058278,1.01391719956096,0.754505365544305,1.12369808963859,1.02440243847791,0.861532034334199,1.90517476513229,1.15884325944855,1.15745532278223,1.23625770240992,0.441596760403192,1.37147700954166,2.66213709239006,0.953744759789284,1.0174249164263,0.846984423737976,0.846146078916765,1.28049581010941,0.526139422875686,1.08643291076689,1.68342681497322,0.949080144993393,0.886540341380071,1.22769312950907,1.54936841185966,1.15743966588685,0.999242311751784,2.10538447600868,0.859484216193193,0.765153328275374,2.20591419119516,4.40548887678801 | ||
|short_description=p1@Acap1 | |short_description=p1@Acap1 | ||
}} | }} |
Latest revision as of 13:43, 25 September 2015
Short description: | p1@Acap1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Acap1_5end |
Coexpression cluster: | MCL_coexpression_mm9:36 |
Association with transcript: | 0bp_to_ENSMUST00000001631, NM_153788, uc007jsg.1, uc007jsi.1_5end |
EntrezGene: | Acap1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 2.92e-10 | 32 |
hematopoietic oligopotent progenitor cell | 2.92e-10 | 32 |
hematopoietic stem cell | 2.92e-10 | 32 |
hematopoietic multipotent progenitor cell | 2.92e-10 | 32 |
lymphoid lineage restricted progenitor cell | 4.75e-10 | 12 |
T cell | 3.32e-09 | 11 |
pro-T cell | 3.32e-09 | 11 |
lymphocyte | 7.20e-09 | 13 |
common lymphoid progenitor | 7.20e-09 | 13 |
hematopoietic lineage restricted progenitor cell | 8.24e-08 | 25 |
mature alpha-beta T cell | 1.01e-07 | 9 |
alpha-beta T cell | 1.01e-07 | 9 |
immature T cell | 1.01e-07 | 9 |
mature T cell | 1.01e-07 | 9 |
immature alpha-beta T cell | 1.01e-07 | 9 |
CD4-positive, alpha-beta T cell | 5.77e-07 | 8 |