FFCP PHASE1:Mm9::chr2:118605439..118605513,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=214240 | |EntrezGene=214240 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q8CIP5,A3KGG4,A3KGG1 | |UniProt=Q8CIP5,A3KGG4,A3KGG1 | ||
|association_with_transcript=0bp_to_ENSMUST00000037547,ENSMUST00000063975,ENSMUST00000110843,ENSMUST00000110846,ENSMUST00000142072,NM_170593,uc008lsp.1,uc008lsq.1,uc008lsr.2,uc008lss.2_5end | |association_with_transcript=0bp_to_ENSMUST00000037547,ENSMUST00000063975,ENSMUST00000110843,ENSMUST00000110846,ENSMUST00000142072,NM_170593,uc008lsp.1,uc008lsq.1,uc008lsr.2,uc008lss.2_5end | ||
|cluster_id=chr2:118605439..118605513,+ | |||
|description=CAGE_peak_1_at_Disp2_5end | |description=CAGE_peak_1_at_Disp2_5end | ||
|id=chr2:118605439..118605513,+ | |id=chr2:118605439..118605513,+ | ||
|ontology_enrichment_celltype=CL:0002319!4.80e-15!43;CL:0000540!5.47e-15!33;CL:0000047!5.47e-15!33;CL:0000031!5.47e-15!33;CL:0000404!5.47e-15!33;CL:0000221!6.14e-15!44;CL:0000133!6.14e-15!44;CL:0000117!1.02e-13!23;CL:0000337!1.02e-13!23;CL:0000055!4.02e-12!50;CL:0000393!1.78e-11!39;CL:0000211!1.78e-11!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,3.62e-16,33;CL:0000047,3.62e-16,33;CL:0000031,3.62e-16,33;CL:0000404,3.62e-16,33;CL:0002319,7.74e-16,43;CL:0000221,1.00e-15,44;CL:0000133,1.00e-15,44;CL:0000117,8.72e-15,23;CL:0000337,8.72e-15,23;CL:0000393,4.82e-12,39;CL:0000211,4.82e-12,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.36e-33!73;UBERON:0005743!2.36e-33!73;UBERON:0000073!3.87e-33!75;UBERON:0001016!3.87e-33!75;UBERON:0002346!3.86e-32!71;UBERON:0003075!3.86e-32!71;UBERON:0007284!3.86e-32!71;UBERON:0004121!4.77e-31!102;UBERON:0000924!4.77e-31!102;UBERON:0006601!4.77e-31!102;UBERON:0001049!4.37e-27!52;UBERON:0005068!4.37e-27!52;UBERON:0006241!4.37e-27!52;UBERON:0007135!4.37e-27!52;UBERON:0000955!8.42e-26!50;UBERON:0006238!8.42e-26!50;UBERON:0000033!2.87e-25!63;UBERON:0002616!3.40e-25!49;UBERON:0003056!2.47e-20!49;UBERON:0003080!1.21e-19!40;UBERON:0002020!4.92e-19!34;UBERON:0002780!6.76e-19!39;UBERON:0001890!6.76e-19!39;UBERON:0006240!6.76e-19!39;UBERON:0002791!6.68e-16!29;UBERON:0003528!6.68e-16!29;UBERON:0001893!6.68e-16!29;UBERON:0000956!2.50e-11!21;UBERON:0001869!2.50e-11!21;UBERON:0000203!2.50e-11!21;UBERON:0007811!8.40e-11!86;UBERON:0002619!1.90e-09!17;UBERON:0003076!6.14e-08!12;UBERON:0003057!6.14e-08!12;UBERON:0000153!3.05e-07!94;UBERON:0004111!3.32e-07!122;UBERON:0000025!3.62e-07!114;UBERON:0002021!3.94e-07!10;UBERON:0000411!3.94e-07!10;UBERON:0001950!3.94e-07!10;UBERON:0000468!4.36e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.12e-35,73;UBERON:0001016,1.90e-35,75;UBERON:0000073,5.31e-31,54;UBERON:0002346,1.46e-30,64;UBERON:0003075,1.46e-30,64;UBERON:0007284,1.46e-30,64;UBERON:0001049,2.46e-29,52;UBERON:0005068,2.46e-29,52;UBERON:0006241,2.46e-29,52;UBERON:0007135,2.46e-29,52;UBERON:0004121,1.01e-28,95;UBERON:0000924,1.01e-28,95;UBERON:0006601,1.01e-28,95;UBERON:0000955,1.81e-25,47;UBERON:0006238,1.81e-25,47;UBERON:0002616,8.01e-25,46;UBERON:0010371,3.52e-24,73;UBERON:0003056,1.62e-21,49;UBERON:0003080,3.11e-21,40;UBERON:0002020,1.43e-20,34;UBERON:0002780,2.02e-20,39;UBERON:0001890,2.02e-20,39;UBERON:0006240,2.02e-20,39;UBERON:0010314,1.90e-19,92;UBERON:0003528,3.68e-17,29;UBERON:0002791,3.68e-17,29;UBERON:0001893,3.68e-17,29;UBERON:0000956,3.48e-12,21;UBERON:0001869,3.48e-12,21;UBERON:0000203,3.48e-12,21;UBERON:0002619,3.84e-10,17;UBERON:0003076,1.69e-08,12;UBERON:0003057,1.69e-08,12;UBERON:0002021,1.27e-07,10;UBERON:0000411,1.27e-07,10;UBERON:0001950,1.27e-07,10 | |||
|phase1_expression=6.56610273129655,0,0,0,0,2.68606835059024,3.27057696833736,0,0,0,0,0,0,0,0,0,0,0,0,0,39.4600866300964,0,0,1.27993938234725,0.45881856213434,0,0.86152399231815,0.646413698057667,0.760093677825496,0,0.221730510655305,0,0,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,1.00717454380462,1.92616169317078,0.550640256485045,23.4717403304412,12.4274339136855,11.2039953194581,11.0825042472342,7.8392396110203,11.5002051491977,0,0,0,0,0,0.515672092277442,106.013825490429,83.0515837457092,107.75133859605,1.35537812827653,0.889294796111139,0,0,0,0.599200221036809,2.68952813725088,29.6552291202246,41.7168349444924,29.4454945891935,221.379512912948,197.456475610743,28.5403562170843,22.5236856892855,48.7185956903311,335.853437048136,317.813784494032,335.015849031867,118.433886381714,104.204426063145,92.7225799591033,343.115905772697,299.389708536854,305.290899058067,197.990409438305,180.669662934062,126.565223715379,2.42323818666189,7.10372665003784,0.289864488701678,6.0229671388697,0,0.539703191637817,0,1.34408066129201,7.16266542671934,0,0,0.35333957451034,3.52108549441701,0,0,0,0,0,0,5.1382745873577,0,39.6340511303082,24.8084017275574,27.7063585264048,20.7553947530453,27.8836885022352,29.9851203196047,16.5879900555172,3.46072954828123,1.01219549843938,0,0.161766849947409,0.441683036920787,0,0,175.375697409917,127.762491156208,1.53274233125155,0,0,0,407.879911099332,161.497712794975,39.5811209155523,214.499211117269,151.894981654216,285.708561269395,227.786733347132,1.32391173005411,0.622034853050465,1.51633655060205,12.8369532090749,0.650602214813519,5.0578462975364,7.74267158163002,7.23383125611432,12.7908618404496,11.7864622662062,13.0245397138023,45.2730898793277,0,0,0,0,0,0,0,0.796137067273973,0,0,0,0,0.703578179943289,0.36012412292203,0.23674473558521,0,0.154267112887378,0,0,0,0.16455984991348,0.164167464079095,0,0.146199987425332,0,0.134206418760372,254.24054781403,50.2174508410908,0.991256348951394,2.64450566663544,1.49301775374664,2.32236671860439,2.96395161040815,2.8235693447268,3.55804870151792,4.75564065281398,3.32170343081158,2.14108641141214,3.2673577144035,4.97391180102877,2.72949721966768,5.39291645192533,2.16138049874694,2.98711909881551,1.13800740571849,3.65595240351132,0,0.814605311381257,0.387904974335251,0.561086559122548,0.0632365371242573,0,0.156998727841375,0,5.63259991465583,0.166845105716094,0.196558995113203,0.224862112384854,0,0.482354319504834,0,0,0,0.823684239564244,1.43768206527355,0.372140947668503,0.312037673114561,0,0.538192240565737,0.482443521363367,10.5309318394965,1.13694847062291,0.325929952884052,0.848725428875941,0.469380496577004,1.50755631697634,1.19021820443007,3.51240566144038,2.67979744980525,3.98636441367795,7.17546458958692,9.01248230936559,11.0518388394173,5.78596234326046,0,0,0.491764273019036,0,412.29391508865,376.718360707341,0.819674726883377,0,12.9358369960665,10.5418460960092,18.9572590004863,4.54040716109849,8.68914828921337,10.190755108398,14.9779959619711,19.2888866221466,21.3455400091123,140.41741527633,0.425820255624806,0.534196811001766,0,2.14461159864296,3.98235415019888,8.01176099311439,6.34879469625977,5.65815239267694,12.6979813938732,12.912276213645,8.5281336745513,11.6330793432802,7.84294232446387,5.37262488490887,1.05418608574999,4.12542172992747,79.6628677463864,1.8006109403131,6.33857550535497,8.57348140126369,24.1182717753492,22.4744710178609,20.2395295340609,37.1447237919811,7.74416636610244,2.33015277950202,7.27743713581374,0,0,0,0,0.164140899745061,1.7488850197791,396.62472100048,0,0,0,0.188368457004691,0,0.228778173206523,0,0,0,2.86401185404534,0.474503990371703,5.28630614529807,2.70013352054503,3.76358932826044,4.58561383866973,3.10187996685088,4.05001933054146,5.49687478166462,2.33306951925227,0.621339313086926,0,0,0,0,0.129159823477731,0.506868376472335,0.234714477291508,0.2604087696879,0.209718688851422,0.483168241652012,0.864090018773596,0,0.608175645870493,0.205421914329655,0.129920822977795,0.358053391334963,0.198681354781265,0,0,0.403865799792591,0.15241361331,0.100826185136841,0,0.0962118416403295,0.116876902181569,0.226730383615211,0.221985953374065,0,0.167884616364078,5.02292944483695,2.43987218086537,0.915758121336325,1.2862102744744,2.50786052017682,170.555056470354,181.368143183828,186.763937381243,185.94514329587,160.30930962633,177.51756588658,171.455715058879,182.380087305809,187.600957319461,177.591786930874,1.97195960409936,11.9707462020309,10.2440163452481,10.9398022680732,12.5767897576789,15.8105417267012,14.0015438515018,15.8646994073949,15.4041220604071,14.6564382823003,15.7157165931949,16.9763707247469,13.2970940607233,15.3660365771686,15.9670603696605,10.9547548995107,15.8761526544452,15.4327376370964,10.714233420886,11.7759136107518,11.3146853287187,14.0205886865877,12.3986818772607,14.2439488299682,14.4928445839609,15.3998586362851,13.7195979654579,14.7319038405192,12.765586701511,16.2731258780744,17.0834426098811,14.2831499444567,14.3230865109391,18.9022946246879,9.45242393807593,37.7213972686298,16.8430758080694,12.8922632428979,11.8598765882683,11.2501623750953,10.2021847672985 | |phase1_expression=6.56610273129655,0,0,0,0,2.68606835059024,3.27057696833736,0,0,0,0,0,0,0,0,0,0,0,0,0,39.4600866300964,0,0,1.27993938234725,0.45881856213434,0,0.86152399231815,0.646413698057667,0.760093677825496,0,0.221730510655305,0,0,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,1.00717454380462,1.92616169317078,0.550640256485045,23.4717403304412,12.4274339136855,11.2039953194581,11.0825042472342,7.8392396110203,11.5002051491977,0,0,0,0,0,0.515672092277442,106.013825490429,83.0515837457092,107.75133859605,1.35537812827653,0.889294796111139,0,0,0,0.599200221036809,2.68952813725088,29.6552291202246,41.7168349444924,29.4454945891935,221.379512912948,197.456475610743,28.5403562170843,22.5236856892855,48.7185956903311,335.853437048136,317.813784494032,335.015849031867,118.433886381714,104.204426063145,92.7225799591033,343.115905772697,299.389708536854,305.290899058067,197.990409438305,180.669662934062,126.565223715379,2.42323818666189,7.10372665003784,0.289864488701678,6.0229671388697,0,0.539703191637817,0,1.34408066129201,7.16266542671934,0,0,0.35333957451034,3.52108549441701,0,0,0,0,0,0,5.1382745873577,0,39.6340511303082,24.8084017275574,27.7063585264048,20.7553947530453,27.8836885022352,29.9851203196047,16.5879900555172,3.46072954828123,1.01219549843938,0,0.161766849947409,0.441683036920787,0,0,175.375697409917,127.762491156208,1.53274233125155,0,0,0,407.879911099332,161.497712794975,39.5811209155523,214.499211117269,151.894981654216,285.708561269395,227.786733347132,1.32391173005411,0.622034853050465,1.51633655060205,12.8369532090749,0.650602214813519,5.0578462975364,7.74267158163002,7.23383125611432,12.7908618404496,11.7864622662062,13.0245397138023,45.2730898793277,0,0,0,0,0,0,0,0.796137067273973,0,0,0,0,0.703578179943289,0.36012412292203,0.23674473558521,0,0.154267112887378,0,0,0,0.16455984991348,0.164167464079095,0,0.146199987425332,0,0.134206418760372,254.24054781403,50.2174508410908,0.991256348951394,2.64450566663544,1.49301775374664,2.32236671860439,2.96395161040815,2.8235693447268,3.55804870151792,4.75564065281398,3.32170343081158,2.14108641141214,3.2673577144035,4.97391180102877,2.72949721966768,5.39291645192533,2.16138049874694,2.98711909881551,1.13800740571849,3.65595240351132,0,0.814605311381257,0.387904974335251,0.561086559122548,0.0632365371242573,0,0.156998727841375,0,5.63259991465583,0.166845105716094,0.196558995113203,0.224862112384854,0,0.482354319504834,0,0,0,0.823684239564244,1.43768206527355,0.372140947668503,0.312037673114561,0,0.538192240565737,0.482443521363367,10.5309318394965,1.13694847062291,0.325929952884052,0.848725428875941,0.469380496577004,1.50755631697634,1.19021820443007,3.51240566144038,2.67979744980525,3.98636441367795,7.17546458958692,9.01248230936559,11.0518388394173,5.78596234326046,0,0,0.491764273019036,0,412.29391508865,376.718360707341,0.819674726883377,0,12.9358369960665,10.5418460960092,18.9572590004863,4.54040716109849,8.68914828921337,10.190755108398,14.9779959619711,19.2888866221466,21.3455400091123,140.41741527633,0.425820255624806,0.534196811001766,0,2.14461159864296,3.98235415019888,8.01176099311439,6.34879469625977,5.65815239267694,12.6979813938732,12.912276213645,8.5281336745513,11.6330793432802,7.84294232446387,5.37262488490887,1.05418608574999,4.12542172992747,79.6628677463864,1.8006109403131,6.33857550535497,8.57348140126369,24.1182717753492,22.4744710178609,20.2395295340609,37.1447237919811,7.74416636610244,2.33015277950202,7.27743713581374,0,0,0,0,0.164140899745061,1.7488850197791,396.62472100048,0,0,0,0.188368457004691,0,0.228778173206523,0,0,0,2.86401185404534,0.474503990371703,5.28630614529807,2.70013352054503,3.76358932826044,4.58561383866973,3.10187996685088,4.05001933054146,5.49687478166462,2.33306951925227,0.621339313086926,0,0,0,0,0.129159823477731,0.506868376472335,0.234714477291508,0.2604087696879,0.209718688851422,0.483168241652012,0.864090018773596,0,0.608175645870493,0.205421914329655,0.129920822977795,0.358053391334963,0.198681354781265,0,0,0.403865799792591,0.15241361331,0.100826185136841,0,0.0962118416403295,0.116876902181569,0.226730383615211,0.221985953374065,0,0.167884616364078,5.02292944483695,2.43987218086537,0.915758121336325,1.2862102744744,2.50786052017682,170.555056470354,181.368143183828,186.763937381243,185.94514329587,160.30930962633,177.51756588658,171.455715058879,182.380087305809,187.600957319461,177.591786930874,1.97195960409936,11.9707462020309,10.2440163452481,10.9398022680732,12.5767897576789,15.8105417267012,14.0015438515018,15.8646994073949,15.4041220604071,14.6564382823003,15.7157165931949,16.9763707247469,13.2970940607233,15.3660365771686,15.9670603696605,10.9547548995107,15.8761526544452,15.4327376370964,10.714233420886,11.7759136107518,11.3146853287187,14.0205886865877,12.3986818772607,14.2439488299682,14.4928445839609,15.3998586362851,13.7195979654579,14.7319038405192,12.765586701511,16.2731258780744,17.0834426098811,14.2831499444567,14.3230865109391,18.9022946246879,9.45242393807593,37.7213972686298,16.8430758080694,12.8922632428979,11.8598765882683,11.2501623750953,10.2021847672985 | ||
|short_description=p1@Disp2 | |short_description=p1@Disp2 | ||
}} | }} |
Latest revision as of 13:54, 25 September 2015
Short description: | p1@Disp2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Disp2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000037547, ENSMUST00000063975, ENSMUST00000110843, ENSMUST00000110846, ENSMUST00000142072, NM_170593, uc008lsp.1, uc008lsq.1, uc008lsr.2, uc008lss.2_5end |
EntrezGene: | Disp2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 3.62e-16 | 33 |
neuronal stem cell | 3.62e-16 | 33 |
neuroblast | 3.62e-16 | 33 |
electrically signaling cell | 3.62e-16 | 33 |
neural cell | 7.74e-16 | 43 |
ectodermal cell | 1.00e-15 | 44 |
neurectodermal cell | 1.00e-15 | 44 |
CNS neuron (sensu Vertebrata) | 8.72e-15 | 23 |
neuroblast (sensu Vertebrata) | 8.72e-15 | 23 |
electrically responsive cell | 4.82e-12 | 39 |
electrically active cell | 4.82e-12 | 39 |