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FFCP PHASE1:Mm9::chr16:45724457..45724567,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=56370
|EntrezGene=56370
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q9R1Q8
|UniProt=Q9R1Q8
|association_with_transcript=76bp_to_NM_019754,uc007ziw.1_5end
|association_with_transcript=76bp_to_NM_019754,uc007ziw.1_5end
|cluster_id=chr16:45724457..45724567,-
|description=CAGE_peak_1_at_Tagln3_5end
|description=CAGE_peak_1_at_Tagln3_5end
|id=chr16:45724457..45724567,-
|id=chr16:45724457..45724567,-
|ontology_enrichment_celltype=CL:0002319!1.47e-15!43;CL:0000221!1.52e-15!44;CL:0000133!1.52e-15!44;CL:0000540!1.23e-14!33;CL:0000047!1.23e-14!33;CL:0000031!1.23e-14!33;CL:0000404!1.23e-14!33;CL:0000117!6.79e-14!23;CL:0000337!6.79e-14!23;CL:0000055!3.68e-11!50;CL:0000393!1.68e-10!39;CL:0000211!1.68e-10!39
|ontology_enrichment_celltype=CL:0002319!1.47e-15!43;CL:0000221!1.52e-15!44;CL:0000133!1.52e-15!44;CL:0000540!1.23e-14!33;CL:0000047!1.23e-14!33;CL:0000031!1.23e-14!33;CL:0000404!1.23e-14!33;CL:0000117!6.79e-14!23;CL:0000337!6.79e-14!23;CL:0000055!3.68e-11!50;CL:0000393!1.68e-10!39;CL:0000211!1.68e-10!39
|ontology_enrichment_celltype_v019_2=CL:0002319,1.02e-16,43;CL:0000221,1.04e-16,44;CL:0000133,1.04e-16,44;CL:0000540,3.13e-16,33;CL:0000047,3.13e-16,33;CL:0000031,3.13e-16,33;CL:0000404,3.13e-16,33;CL:0000117,2.14e-15,23;CL:0000337,2.14e-15,23;CL:0000393,1.87e-11,39;CL:0000211,1.87e-11,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!1.12e-36!102;UBERON:0000924!1.12e-36!102;UBERON:0006601!1.12e-36!102;UBERON:0001017!1.97e-33!73;UBERON:0005743!1.97e-33!73;UBERON:0000073!2.13e-33!75;UBERON:0001016!2.13e-33!75;UBERON:0002346!2.31e-32!71;UBERON:0003075!2.31e-32!71;UBERON:0007284!2.31e-32!71;UBERON:0000033!2.81e-28!63;UBERON:0001049!4.00e-26!52;UBERON:0005068!4.00e-26!52;UBERON:0006241!4.00e-26!52;UBERON:0007135!4.00e-26!52;UBERON:0000955!2.80e-25!50;UBERON:0006238!2.80e-25!50;UBERON:0002616!9.93e-25!49;UBERON:0003056!1.40e-23!49;UBERON:0002020!4.56e-20!34;UBERON:0003080!6.08e-20!40;UBERON:0002780!2.62e-19!39;UBERON:0001890!2.62e-19!39;UBERON:0006240!2.62e-19!39;UBERON:0002791!1.62e-17!29;UBERON:0003528!1.62e-17!29;UBERON:0001893!1.62e-17!29;UBERON:0007811!1.43e-13!86;UBERON:0000153!3.33e-13!94;UBERON:0000956!8.88e-13!21;UBERON:0001869!8.88e-13!21;UBERON:0000203!8.88e-13!21;UBERON:0002619!1.77e-10!17;UBERON:0002021!2.79e-08!10;UBERON:0000411!2.79e-08!10;UBERON:0001950!2.79e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0004121,3.94e-37,95;UBERON:0000924,3.94e-37,95;UBERON:0006601,3.94e-37,95;UBERON:0001017,1.13e-36,73;UBERON:0001016,1.21e-36,75;UBERON:0002346,7.35e-34,64;UBERON:0003075,7.35e-34,64;UBERON:0007284,7.35e-34,64;UBERON:0010371,1.43e-31,73;UBERON:0000073,4.80e-30,54;UBERON:0001049,1.84e-28,52;UBERON:0005068,1.84e-28,52;UBERON:0006241,1.84e-28,52;UBERON:0007135,1.84e-28,52;UBERON:0003056,2.86e-26,49;UBERON:0000955,3.41e-25,47;UBERON:0006238,3.41e-25,47;UBERON:0002616,1.37e-24,46;UBERON:0010314,8.43e-23,92;UBERON:0002020,2.51e-22,34;UBERON:0003080,3.47e-22,40;UBERON:0002780,1.79e-21,39;UBERON:0001890,1.79e-21,39;UBERON:0006240,1.79e-21,39;UBERON:0003528,1.83e-19,29;UBERON:0002791,1.83e-19,29;UBERON:0001893,1.83e-19,29;UBERON:0000956,3.83e-14,21;UBERON:0001869,3.83e-14,21;UBERON:0000203,3.83e-14,21;UBERON:0002619,1.45e-11,17;UBERON:0002021,4.21e-09,10;UBERON:0000411,4.21e-09,10;UBERON:0001950,4.21e-09,10;UBERON:0003076,9.40e-07,12;UBERON:0003057,9.40e-07,12
|phase1_expression=4.00372117761985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.0672511127527,0,0,0.159992422793407,0,0,0,0,0,0,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,8.72100625521786,5.05278220289285,3.88859798148567,4.75953833526233,5.75010257459886,0,0,0,0.514518872071894,0.573066879877513,0,76.6779386657876,65.06589045046,53.8756692980252,2.03306719241479,0.889294796111139,0,0,0,29.6604109413221,58.7854007141978,89.1730665852908,94.7741687088468,103.47988098488,67.1279813348938,70.0153274816615,71.902099139178,80.0309683002274,68.9414089957516,128.835580769285,133.177893622851,129.183094468501,69.5040736338122,78.8623487852771,79.1788323246275,197.940746291979,137.31407684773,155.70141448457,34.4715445004191,46.5555396213067,80.8973594881805,1.8931548333296,4.6854367266207,0.289864488701678,0,0,1.07940638327563,0,0,5.61777680527007,0,0,0,3.52108549441701,0,0,0,0,0,0,2.62622923353838,0,3.11728492036132,12.4909435271618,16.1366703505435,14.0675453326196,16.7302131013411,7.17291113527799,0.502666365318702,0,0.433798070759735,0,0.161766849947409,0.220841518460394,0,0,136.728632204393,170.070725932526,0,0,0,0,113.840885947665,68.625090422794,54.2826801127574,118.548186371133,124.789143177201,110.958815794805,105.294579730975,0.509196819251581,0.124406970610093,0.252722758433675,4.20883711772948,13.6626465110839,51.7279734975314,40.1538549465929,39.9367767264645,29.1876581359197,32.9252261132064,35.0444449853386,20.6962696591213,5.6047678162539,2.83659120251729,3.69497360744293,1.7535658594206,0.834141747676794,0.696504333044333,1.02891068203972,0.199034266818493,0,0,0,3.31401236056803,1.87620847984877,2.34080679899319,0,0.590292695242212,0.462801338662135,0,0,0,0.16455984991348,0,0.0810688095458557,0.146199987425332,0.439100230582101,0.134206418760372,75.7043814830858,49.3942139420565,0,0,6.82522401712749,7.19933682767359,5.92790322081629,3.42861991859682,4.22518283305254,3.23383564391351,0,3.29397909448022,2.01068167040216,1.59165177632921,1.16978452271472,0,1.08069024937347,0.995706366271836,1.51734320762465,3.77020091612105,1.1270773567308,1.22190796707189,1.16371492300575,0.98190147846446,0,0,0,0,0,0.667380422864376,0.589676985339609,0,0,0,0,0,0,0,0,0,0,0,0,0.482443521363367,0,4.54779388249163,1.62964976442026,1.52770577197669,0,0,0.238043640886014,0.585400943573396,0,0.664394068946325,0,0.327726629431476,0,0.144649058581512,0,0,0,0,147.385441608793,148.624418598914,0,0,8.20321370482267,9.76096860741596,13.1408272617007,4.30143836314594,4.90157082981267,3.67999490025482,4.04810701674894,11.9824901743638,7.90575555893047,62.9789780186742,0,0.890328018336276,0.651547837414304,0.164970122972535,0,1.45668381692989,1.51161778482376,0.377210159511796,0.295301892880773,0.307435147943927,1.29214146584111,0.727067458955011,0.712994756769443,0.316036757935816,0,0,1.70219802876894,12.6042765821917,10.8661294377514,4.92975180572662,1.77340233642274,6.24290861607247,9.70839221552514,9.74287837166718,0.704015124191131,0,3.30792597082443,5.27636009412736,0.807322133479528,1.56813604813205,8.11731939221328,10.669158483429,0,130.91026321942,0,0.206386867963223,0,0,0,0,0,0,0,0.954670618015114,8.85740782027179,3.25311147402958,4.75223499615926,3.76358932826044,2.62035076495413,3.77620169877498,1.65306911450672,0.523511883968059,0.90730481304255,0.621339313086926,0,0.149516546043979,0.165458490457098,0,0.516639293910924,0.168956125490778,0.117357238645754,0.13020438484395,0.104859344425711,0,0,0.316011120628178,1.62180172232131,0.513554785824136,0.129920822977795,0,0,0,0.147689527174577,0,0.0762068066549998,0.100826185136841,0,0,0,0.453460767230423,0,0,0,1.9318959403219,0.187682475451182,0.36630324853453,0.643105137237198,0,144.576471709969,137.637245715646,132.91175911794,135.420307686826,168.530299863578,166.942051323124,162.005400055633,194.538759792863,191.679239000319,172.931944125108,34.4573993979467,30.3258903784784,30.0491146127276,8.0225216632537,19.0747977991464,13.236732608401,11.3345831178824,13.1862436632892,8.98573786857083,9.34979683526051,8.61829619626815,8.86543804514558,10.7687733590365,9.66779801313526,9.47685237767619,10.9547548995107,9.15486174964358,10.6100071255038,3.70877310722976,8.68473628792944,13.7147700954166,11.3584515941976,11.2065009275241,8.57543858130738,10.6343599869324,9.47683608386777,11.5244622909847,13.1534855718921,10.8643291076689,13.4674145197857,11.0330566855482,9.1609168609274,9.41231399290286,8.36658942404216,7.9091710502268,23.232383748229,8.18760629558929,4.94203424311086,5.16478496585877,5.07360263974886,2.55054619182464
|phase1_expression=4.00372117761985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.0672511127527,0,0,0.159992422793407,0,0,0,0,0,0,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,8.72100625521786,5.05278220289285,3.88859798148567,4.75953833526233,5.75010257459886,0,0,0,0.514518872071894,0.573066879877513,0,76.6779386657876,65.06589045046,53.8756692980252,2.03306719241479,0.889294796111139,0,0,0,29.6604109413221,58.7854007141978,89.1730665852908,94.7741687088468,103.47988098488,67.1279813348938,70.0153274816615,71.902099139178,80.0309683002274,68.9414089957516,128.835580769285,133.177893622851,129.183094468501,69.5040736338122,78.8623487852771,79.1788323246275,197.940746291979,137.31407684773,155.70141448457,34.4715445004191,46.5555396213067,80.8973594881805,1.8931548333296,4.6854367266207,0.289864488701678,0,0,1.07940638327563,0,0,5.61777680527007,0,0,0,3.52108549441701,0,0,0,0,0,0,2.62622923353838,0,3.11728492036132,12.4909435271618,16.1366703505435,14.0675453326196,16.7302131013411,7.17291113527799,0.502666365318702,0,0.433798070759735,0,0.161766849947409,0.220841518460394,0,0,136.728632204393,170.070725932526,0,0,0,0,113.840885947665,68.625090422794,54.2826801127574,118.548186371133,124.789143177201,110.958815794805,105.294579730975,0.509196819251581,0.124406970610093,0.252722758433675,4.20883711772948,13.6626465110839,51.7279734975314,40.1538549465929,39.9367767264645,29.1876581359197,32.9252261132064,35.0444449853386,20.6962696591213,5.6047678162539,2.83659120251729,3.69497360744293,1.7535658594206,0.834141747676794,0.696504333044333,1.02891068203972,0.199034266818493,0,0,0,3.31401236056803,1.87620847984877,2.34080679899319,0,0.590292695242212,0.462801338662135,0,0,0,0.16455984991348,0,0.0810688095458557,0.146199987425332,0.439100230582101,0.134206418760372,75.7043814830858,49.3942139420565,0,0,6.82522401712749,7.19933682767359,5.92790322081629,3.42861991859682,4.22518283305254,3.23383564391351,0,3.29397909448022,2.01068167040216,1.59165177632921,1.16978452271472,0,1.08069024937347,0.995706366271836,1.51734320762465,3.77020091612105,1.1270773567308,1.22190796707189,1.16371492300575,0.98190147846446,0,0,0,0,0,0.667380422864376,0.589676985339609,0,0,0,0,0,0,0,0,0,0,0,0,0.482443521363367,0,4.54779388249163,1.62964976442026,1.52770577197669,0,0,0.238043640886014,0.585400943573396,0,0.664394068946325,0,0.327726629431476,0,0.144649058581512,0,0,0,0,147.385441608793,148.624418598914,0,0,8.20321370482267,9.76096860741596,13.1408272617007,4.30143836314594,4.90157082981267,3.67999490025482,4.04810701674894,11.9824901743638,7.90575555893047,62.9789780186742,0,0.890328018336276,0.651547837414304,0.164970122972535,0,1.45668381692989,1.51161778482376,0.377210159511796,0.295301892880773,0.307435147943927,1.29214146584111,0.727067458955011,0.712994756769443,0.316036757935816,0,0,1.70219802876894,12.6042765821917,10.8661294377514,4.92975180572662,1.77340233642274,6.24290861607247,9.70839221552514,9.74287837166718,0.704015124191131,0,3.30792597082443,5.27636009412736,0.807322133479528,1.56813604813205,8.11731939221328,10.669158483429,0,130.91026321942,0,0.206386867963223,0,0,0,0,0,0,0,0.954670618015114,8.85740782027179,3.25311147402958,4.75223499615926,3.76358932826044,2.62035076495413,3.77620169877498,1.65306911450672,0.523511883968059,0.90730481304255,0.621339313086926,0,0.149516546043979,0.165458490457098,0,0.516639293910924,0.168956125490778,0.117357238645754,0.13020438484395,0.104859344425711,0,0,0.316011120628178,1.62180172232131,0.513554785824136,0.129920822977795,0,0,0,0.147689527174577,0,0.0762068066549998,0.100826185136841,0,0,0,0.453460767230423,0,0,0,1.9318959403219,0.187682475451182,0.36630324853453,0.643105137237198,0,144.576471709969,137.637245715646,132.91175911794,135.420307686826,168.530299863578,166.942051323124,162.005400055633,194.538759792863,191.679239000319,172.931944125108,34.4573993979467,30.3258903784784,30.0491146127276,8.0225216632537,19.0747977991464,13.236732608401,11.3345831178824,13.1862436632892,8.98573786857083,9.34979683526051,8.61829619626815,8.86543804514558,10.7687733590365,9.66779801313526,9.47685237767619,10.9547548995107,9.15486174964358,10.6100071255038,3.70877310722976,8.68473628792944,13.7147700954166,11.3584515941976,11.2065009275241,8.57543858130738,10.6343599869324,9.47683608386777,11.5244622909847,13.1534855718921,10.8643291076689,13.4674145197857,11.0330566855482,9.1609168609274,9.41231399290286,8.36658942404216,7.9091710502268,23.232383748229,8.18760629558929,4.94203424311086,5.16478496585877,5.07360263974886,2.55054619182464
|short_description=p1@Tagln3
|short_description=p1@Tagln3
}}
}}

Latest revision as of 14:23, 25 September 2015

Short description:p1@Tagln3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Tagln3_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 76bp_to_NM_019754, uc007ziw.1_5end
EntrezGene:Tagln3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Tagln3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A324.07
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C28.72
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B85.05
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.89
Mouse Astrocytes, donor2.CNhs12078.11552-120C44.76
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C376.68
Mouse Granule cells, donor2.CNhs12357.11731-123E365.07
Mouse Granule cells, donor3.CNhs12108.11636-122C753.88
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.03
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C829.66
Mouse Microglia, donor2.CNhs12634.11736-123E858.79
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D589.17
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F594.77
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D9103.48
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F167.13
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D570.02
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D271.90
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F280.03
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D668.94
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3128.84
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3133.18
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7129.18
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D469.50
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F478.86
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D879.18
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4197.94
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5137.31
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6155.70
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D634.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F646.56
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E180.90
Mouse Schwann, donor1.CNhs12507.11728-123D91.89
Mouse Schwann, donor2.CNhs12573.11746-123F94.69
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A75.62
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.52
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.63
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D73.12
adrenal gland, embryo E14.CNhs11038.406-44C512.49
adrenal gland, embryo E16.CNhs11004.1254-43D616.14
adrenal gland, embryo E17.CNhs11043.1263-45I114.07
adrenal gland, embryo E18.CNhs11026.1262-18F516.73
adrenal gland, neonate N00.CNhs11191.1311-23C17.17
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B2136.73
cerebellum, neonate N30.CNhs11135.1395-42I2170.07
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A4113.84
corpus striatum, adult.CNhs10487.19-21D868.63
corpus striatum, neonate N00.CNhs11226.630-43F154.28
cortex, adult.CNhs10473.12-14D5118.55
cortex, neonate N30.CNhs11107.1392-42F2124.79
diencephalon, adult.CNhs10482.20-12F2110.96
diencephalon, neonate N30.CNhs11201.1388-42B2105.29
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G44.21
eyeball, embryo E12.CNhs11016.345-16C613.66
eyeball, embryo E14.CNhs10521.399-16E251.73
eyeball, embryo E15.CNhs10593.426-16C940.15
eyeball, embryo E17.CNhs11023.1261-18D439.94
eyeball, neonate N00.CNhs11207.633-15C629.19
eyeball, neonate N01.CNhs11140.1532-43E732.93
eyeball, neonate N02.CNhs11205.1551-44G835.04
eyeball, neonate N16.CNhs11188.777-19A220.70
forelimb, embryo E11.CNhs10596.335-25E25.60
forelimb, embryo E12.CNhs10600.359-14H22.84
forelimb, embryo E13.CNhs10589.384-1E23.69
forelimb, embryo E14.CNhs10577.413-26A81.75
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B51.03
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E93.31
heart, embryo E12.CNhs11015.353-12F51.88
heart, embryo E13.CNhs11013.376-3I92.34
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E875.70
hippocampus, neonate N00.CNhs11228.627-43G149.39
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I56.83
intestine, embryo E13.CNhs11010.381-16D57.20
intestine, embryo E15.CNhs10602.976-16D85.93
intestine, embryo E16.CNhs10585.463-22H43.43
intestine, embryo E17.CNhs10582.482-18D34.23
intestine, embryo E18.CNhs10526.1289-20F73.23
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E93.29
intestine, neonate N06.CNhs11102.688-20B82.01
intestine, neonate N07.CNhs11095.720-20F21.59
intestine, neonate N10.CNhs11098.755-23A51.17
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E31.08
intestine, neonate N30.CNhs11131.1384-42G11.00
kidney, embryo E14.CNhs10606.411-4I91.52
kidney, embryo E15.CNhs10997.434-16F83.77
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.22
kidney, embryo E18.CNhs11001.1288-20C71.16
kidney, neonate N00.CNhs11214.646-21G70.98
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G24.55
lung, embryo E14.CNhs10604.404-26F81.63
lung, embryo E15.CNhs11020.432-17C51.53
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C2147.39
medulla oblongata, neonate N30.CNhs11200.1396-42A3148.62
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E18.20
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E29.76
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E313.14
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D74.30
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.90
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.68
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.05
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D511.98
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D67.91
olfactory brain, adult.CNhs10489.18-22I962.98
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.46
pancreas, embryo E15.CNhs11042.1556-45F21.51
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G91.29
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E612.60
pituitary gland, embryo E13.CNhs11009.370-44C710.87
pituitary gland, embryo E14.CNhs11037.398-44A54.93
pituitary gland, embryo E15.CNhs10592.427-16B91.77
pituitary gland, embryo E16.CNhs11036.449-43F66.24
pituitary gland, embryo E17.CNhs11039.1265-44F59.71
pituitary gland, neonate N00.CNhs11190.1308-22E99.74
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F83.31
skin, adult.CNhs10492.30-1C35.28
skin, neonate N00.CNhs11124.650-25G40.81
skin, neonate N03.CNhs11215.662-22H31.57
skin, neonate N06.CNhs11097.693-20I58.12
skin, neonate N10.CNhs11108.762-6C410.67
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C9130.91
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E38.86
stomach, embryo E15.CNhs10603.1252-16G83.25
stomach, embryo E16.CNhs11022.459-17D44.75
stomach, embryo E17.CNhs11006.1035-18D53.76
stomach, embryo E18.CNhs10999.1286-20C62.62
stomach, neonate N03.CNhs11193.1340-24B83.78
stomach, neonate N07.CNhs11210.718-18A91.65
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.91
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I41.62
thymus, embryo E15.CNhs11005.430-45I20.51
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.93
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1144.58
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2137.64
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3132.91
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7135.42
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4168.53
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5166.94
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6162.01
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7194.54
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8191.68
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9172.93
whole body, embryo E11.CNhs11014.324-5I834.46
whole body, embryo E12.CNhs10587.857-27C930.33
whole body, embryo E13.CNhs10512.372-23H230.05
whole body, embryo E14.5.CNhs10578.420-27D28.02
whole body, embryo E14.CNhs10519.395-14B119.07
whole body, embryo E16.CNhs10514.453-14F213.24
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G511.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G513.19
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G58.99
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G59.35
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G58.62
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G58.87
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G510.77
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G59.67
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G59.48
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G510.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G59.15
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G510.61
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G58.68
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G513.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G511.36
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G511.21
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G58.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G510.63
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G59.48
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G511.52
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G513.15
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G510.86
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G513.47
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G511.03
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G59.16
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G59.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G58.37
whole body, embryo E17.5.CNhs10513.490-9F97.91
whole body, embryo E17.CNhs10517.475-3I523.23
whole body, embryo E18.CNhs10516.493-3B38.19
whole body, neonate N00.CNhs10525.657-19C24.94
whole body, neonate N01.CNhs10576.659-23C65.16
whole body, neonate N06.CNhs10515.692-21D15.07
whole body, neonate N10.CNhs10518.761-6B42.55





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neural cell1.02e-1643
ectodermal cell1.04e-1644
neurectodermal cell1.04e-1644
neuron3.13e-1633
neuronal stem cell3.13e-1633
neuroblast3.13e-1633
electrically signaling cell3.13e-1633
CNS neuron (sensu Vertebrata)2.14e-1523
neuroblast (sensu Vertebrata)2.14e-1523
electrically responsive cell1.87e-1139
electrically active cell1.87e-1139

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure3.94e-3795
ectoderm3.94e-3795
presumptive ectoderm3.94e-3795
central nervous system1.13e-3673
nervous system1.21e-3675
neurectoderm7.35e-3464
neural plate7.35e-3464
presumptive neural plate7.35e-3464
ecto-epithelium1.43e-3173
regional part of nervous system4.80e-3054
neural tube1.84e-2852
neural rod1.84e-2852
future spinal cord1.84e-2852
neural keel1.84e-2852
pre-chordal neural plate2.86e-2649
brain3.41e-2547
future brain3.41e-2547
regional part of brain1.37e-2446
structure with developmental contribution from neural crest8.43e-2392
gray matter2.51e-2234
anterior neural tube3.47e-2240
regional part of forebrain1.79e-2139
forebrain1.79e-2139
future forebrain1.79e-2139
brain grey matter1.83e-1929
regional part of telencephalon1.83e-1929
telencephalon1.83e-1929
cerebral cortex3.83e-1421
cerebral hemisphere3.83e-1421
pallium3.83e-1421
regional part of cerebral cortex1.45e-1117
occipital lobe4.21e-0910
visual cortex4.21e-0910
neocortex4.21e-0910
posterior neural tube9.40e-0712
chordal neural plate9.40e-0712
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