FFCP PHASE1:Mm9::chr14:105657929..105657975,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=76273 | |EntrezGene=76273 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=240 | |||
|TSSclassifier=NA | |||
|UniProt=Q3V1V0 | |UniProt=Q3V1V0 | ||
|association_with_transcript=0bp_to_ENSMUST00000138283_5end | |association_with_transcript=0bp_to_ENSMUST00000138283_5end | ||
|cluster_id=chr14:105657929..105657975,+ | |||
|description=CAGE_peak_1_at_Ndfip2_5end | |description=CAGE_peak_1_at_Ndfip2_5end | ||
|id=chr14:105657929..105657975,+ | |id=chr14:105657929..105657975,+ | ||
|ontology_enrichment_celltype=CL:0002321!5.80e-09!70;CL:0000220!5.80e-09!70;CL:0000066!2.25e-07!25;CL:0000117!6.56e-07!23;CL:0000337!6.56e-07!23 | |ontology_enrichment_celltype=CL:0002321!5.80e-09!70;CL:0000220!5.80e-09!70;CL:0000066!2.25e-07!25;CL:0000117!6.56e-07!23;CL:0000337!6.56e-07!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0002321,5.80e-09,70;CL:0000066,2.25e-07,25;CL:0000117,6.56e-07,23;CL:0000337,6.56e-07,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.65e-12!75;UBERON:0001016!1.65e-12!75;UBERON:0001017!1.60e-11!73;UBERON:0005743!1.60e-11!73;UBERON:0004121!4.20e-11!102;UBERON:0000924!4.20e-11!102;UBERON:0006601!4.20e-11!102;UBERON:0002020!4.26e-11!34;UBERON:0001049!9.19e-11!52;UBERON:0005068!9.19e-11!52;UBERON:0006241!9.19e-11!52;UBERON:0007135!9.19e-11!52;UBERON:0000160!3.11e-10!43;UBERON:0000955!8.00e-10!50;UBERON:0006238!8.00e-10!50;UBERON:0002616!1.51e-09!49;UBERON:0002791!5.51e-09!29;UBERON:0003528!5.51e-09!29;UBERON:0001893!5.51e-09!29;UBERON:0000344!1.49e-08!15;UBERON:0000033!3.48e-08!63;UBERON:0003080!2.11e-07!40;UBERON:0001242!2.50e-07!13;UBERON:0000060!2.50e-07!13;UBERON:0001262!2.50e-07!13;UBERON:0004786!2.50e-07!13;UBERON:0002021!2.84e-07!10;UBERON:0000411!2.84e-07!10;UBERON:0001950!2.84e-07!10;UBERON:0002780!4.34e-07!39;UBERON:0001890!4.34e-07!39;UBERON:0006240!4.34e-07!39;UBERON:0002346!4.70e-07!71;UBERON:0003075!4.70e-07!71;UBERON:0007284!4.70e-07!71;UBERON:0000064!6.35e-07!99 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.65e-12,75;UBERON:0004121,1.76e-12,95;UBERON:0000924,1.76e-12,95;UBERON:0006601,1.76e-12,95;UBERON:0000073,1.45e-11,54;UBERON:0000160,1.57e-11,31;UBERON:0001017,1.60e-11,73;UBERON:0002020,4.26e-11,34;UBERON:0001049,9.19e-11,52;UBERON:0005068,9.19e-11,52;UBERON:0006241,9.19e-11,52;UBERON:0007135,9.19e-11,52;UBERON:0010371,7.34e-10,73;UBERON:0011216,2.94e-09,194;UBERON:0003528,5.51e-09,29;UBERON:0002791,5.51e-09,29;UBERON:0001893,5.51e-09,29;UBERON:0000955,1.12e-08,47;UBERON:0006238,1.12e-08,47;UBERON:0000344,1.49e-08,15;UBERON:0002616,2.07e-08,46;UBERON:0002346,2.31e-08,64;UBERON:0003075,2.31e-08,64;UBERON:0007284,2.31e-08,64;UBERON:0003080,2.11e-07,40;UBERON:0001242,2.50e-07,13;UBERON:0001262,2.50e-07,13;UBERON:0004786,2.50e-07,13;UBERON:0002021,2.84e-07,10;UBERON:0000411,2.84e-07,10;UBERON:0001950,2.84e-07,10;UBERON:0002780,4.34e-07,39;UBERON:0001890,4.34e-07,39;UBERON:0006240,4.34e-07,39 | |||
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| ||
|short_description=p1@Ndfip2 | |short_description=p1@Ndfip2 | ||
}} | }} |
Latest revision as of 15:47, 25 September 2015
Short description: | p1@Ndfip2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ndfip2_5end |
Coexpression cluster: | MCL_coexpression_mm9:240 |
Association with transcript: | 0bp_to_ENSMUST00000138283_5end |
EntrezGene: | Ndfip2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 5.80e-09 | 70 |
epithelial cell | 2.25e-07 | 25 |
CNS neuron (sensu Vertebrata) | 6.56e-07 | 23 |
neuroblast (sensu Vertebrata) | 6.56e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.65e-12 | 75 |
ectoderm-derived structure | 1.76e-12 | 95 |
ectoderm | 1.76e-12 | 95 |
presumptive ectoderm | 1.76e-12 | 95 |
regional part of nervous system | 1.45e-11 | 54 |
intestine | 1.57e-11 | 31 |
central nervous system | 1.60e-11 | 73 |
gray matter | 4.26e-11 | 34 |
neural tube | 9.19e-11 | 52 |
neural rod | 9.19e-11 | 52 |
future spinal cord | 9.19e-11 | 52 |
neural keel | 9.19e-11 | 52 |
ecto-epithelium | 7.34e-10 | 73 |
organ system subdivision | 2.94e-09 | 194 |
brain grey matter | 5.51e-09 | 29 |
regional part of telencephalon | 5.51e-09 | 29 |
telencephalon | 5.51e-09 | 29 |
brain | 1.12e-08 | 47 |
future brain | 1.12e-08 | 47 |
mucosa | 1.49e-08 | 15 |
regional part of brain | 2.07e-08 | 46 |
neurectoderm | 2.31e-08 | 64 |
neural plate | 2.31e-08 | 64 |
presumptive neural plate | 2.31e-08 | 64 |
anterior neural tube | 2.11e-07 | 40 |
intestinal mucosa | 2.50e-07 | 13 |
wall of intestine | 2.50e-07 | 13 |
gastrointestinal system mucosa | 2.50e-07 | 13 |
occipital lobe | 2.84e-07 | 10 |
visual cortex | 2.84e-07 | 10 |
neocortex | 2.84e-07 | 10 |
regional part of forebrain | 4.34e-07 | 39 |
forebrain | 4.34e-07 | 39 |
future forebrain | 4.34e-07 | 39 |