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FFCP PHASE1:Mm9::chr3:64913421..64913456,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr3:64913421..64913456,+
|DHSsupport=NA
|short_description=p4@Kcnab1
|DPIdataset=NA
|description=CAGE_peak_4_at_Kcnab1_5end
|association_with_transcript=-108bp_to_NM_010597,uc008pkj.1_5end
|EntrezGene=16497
|EntrezGene=16497
|HGNC=
|HGNC=
|MCL_coexpression_id=20
|TSSclassifier=NA
|UniProt=P63143,Q3U7L1
|UniProt=P63143,Q3U7L1
|association_with_transcript=-108bp_to_NM_010597,uc008pkj.1_5end
|cluster_id=chr3:64913421..64913456,+
|description=CAGE_peak_4_at_Kcnab1_5end
|id=chr3:64913421..64913456,+
|ontology_enrichment_celltype=CL:0000055!5.50e-07!50
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!1.82e-20!71;UBERON:0003075!1.82e-20!71;UBERON:0007284!1.82e-20!71;UBERON:0004121!1.83e-20!102;UBERON:0000924!1.83e-20!102;UBERON:0006601!1.83e-20!102;UBERON:0000073!4.75e-20!75;UBERON:0001016!4.75e-20!75;UBERON:0000033!9.30e-20!63;UBERON:0001017!2.67e-19!73;UBERON:0005743!2.67e-19!73;UBERON:0003056!1.03e-15!49;UBERON:0000955!3.38e-15!50;UBERON:0006238!3.38e-15!50;UBERON:0002616!5.82e-15!49;UBERON:0001049!1.46e-14!52;UBERON:0005068!1.46e-14!52;UBERON:0006241!1.46e-14!52;UBERON:0007135!1.46e-14!52;UBERON:0003080!2.95e-10!40;UBERON:0002780!1.24e-09!39;UBERON:0001890!1.24e-09!39;UBERON:0006240!1.24e-09!39;UBERON:0000153!1.32e-09!94;UBERON:0007811!5.13e-09!86;UBERON:0002619!1.24e-07!17;UBERON:0002020!1.34e-07!34;UBERON:0002021!2.21e-07!10;UBERON:0000411!2.21e-07!10;UBERON:0001950!2.21e-07!10;UBERON:0000970!2.80e-07!9;UBERON:0000019!2.80e-07!9;UBERON:0000047!2.80e-07!9;UBERON:0004088!2.80e-07!9;UBERON:0002104!2.80e-07!9;UBERON:0001456!2.80e-07!9;UBERON:0003072!2.80e-07!9;UBERON:0003071!2.80e-07!9;UBERON:0004128!2.80e-07!9;UBERON:0002791!7.66e-07!29;UBERON:0003528!7.66e-07!29;UBERON:0001893!7.66e-07!29;UBERON:0000956!9.67e-07!21;UBERON:0001869!9.67e-07!21;UBERON:0000203!9.67e-07!21
|ontology_enrichment_uberon_v019_2=UBERON:0002346,6.82e-32,64;UBERON:0003075,6.82e-32,64;UBERON:0007284,6.82e-32,64;UBERON:0004121,2.48e-27,95;UBERON:0000924,2.48e-27,95;UBERON:0006601,2.48e-27,95;UBERON:0010371,7.60e-27,73;UBERON:0003056,3.52e-24,49;UBERON:0001017,2.18e-21,73;UBERON:0010314,7.65e-21,92;UBERON:0001016,1.36e-20,75;UBERON:0000073,1.69e-20,54;UBERON:0002616,3.57e-19,46;UBERON:0000955,1.25e-18,47;UBERON:0006238,1.25e-18,47;UBERON:0001049,4.61e-18,52;UBERON:0005068,4.61e-18,52;UBERON:0006241,4.61e-18,52;UBERON:0007135,4.61e-18,52;UBERON:0000970,9.46e-16,9;UBERON:0000019,9.46e-16,9;UBERON:0000047,9.46e-16,9;UBERON:0010312,9.46e-16,9;UBERON:0004088,9.46e-16,9;UBERON:0002104,9.46e-16,9;UBERON:0001456,9.46e-16,9;UBERON:0003072,9.46e-16,9;UBERON:0004128,9.46e-16,9;UBERON:0003071,9.46e-16,9;UBERON:0003080,7.62e-13,40;UBERON:0001444,1.51e-12,11;UBERON:0002780,1.23e-11,39;UBERON:0001890,1.23e-11,39;UBERON:0006240,1.23e-11,39;UBERON:0000020,2.38e-11,12;UBERON:0001032,2.38e-11,12;UBERON:0004456,2.38e-11,12;UBERON:0002021,7.12e-11,10;UBERON:0000411,7.12e-11,10;UBERON:0001950,7.12e-11,10;UBERON:0000033,2.46e-10,13;UBERON:0005085,2.46e-10,13;UBERON:0003528,6.30e-10,29;UBERON:0002791,6.30e-10,29;UBERON:0001893,6.30e-10,29;UBERON:0004733,3.04e-09,6;UBERON:0004732,3.04e-09,6;UBERON:0002028,3.04e-09,6;UBERON:0007277,3.04e-09,6;UBERON:0002619,3.69e-09,17;UBERON:0000483,9.09e-09,174;UBERON:0000956,9.19e-09,21;UBERON:0001869,9.19e-09,21;UBERON:0000203,9.19e-09,21;UBERON:0000119,1.47e-08,176;UBERON:0002020,5.53e-08,34;UBERON:0000025,2.08e-07,114
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87095238332354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00717454380462,1.62203089951223,0.550640256485045,0,5.01457859675027,0.439372365468944,1.1665793944457,1.25987779462826,1.43752564364972,0,0,0,0.514518872071894,0.286533439938757,2.57836046138721,0.404632921719196,1.05798195854407,0,0,0,0,0.988866362566974,0.7104801149461,0,0,0,0.135005938331691,0,0.856952953211411,0.662605622854841,0.122490799214954,0.0958454710182364,0,4.40463523997555,4.34136949489638,5.52983519722476,0.131886287730194,0,0,6.14202597803038,0,2.29197371665215,0.589257170947335,0.284743361598206,0,0.37863096666592,0.604572480854284,2.31891590961342,0,0,0,0,0,0.983110940922263,0.170430322578058,0,0.70667914902068,0,0,0,0,0,0,0,0.22836775943812,0,0.29688427812965,0.173485326766136,0,0,0.301445281105245,0.352766121407114,0.251333182659351,0,0.144599356919912,0,0,0.220841518460394,0,0,12.0040126774734,7.54008144528438,0,0,0,0,5.99162557619291,10.0650132620098,0.251308704225729,8.34356736922927,5.11430914660661,5.81806524766768,3.89379031362618,0.509196819251581,0,0,4.8401626853889,1.69156575851515,1.83921683546778,2.34080768746954,2.86339153887859,3.81004395247436,3.58718416797579,3.5606655332697,11.3829483125167,0,0.756424320671277,0.351902248327898,0.219195732427575,0.278047249225598,0.348252166522167,0.205782136407943,0.796137067273973,0,0,0,0.207125772535502,0.234526059981096,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,7.36014819974445,0.411618449517138,0,0,0.426576501070468,0.232236671860439,0.128867461322093,0.201683524623343,0.22237804384487,0,0,0.164698954724011,0.251335208800269,0.198956472041151,0,0,0.432276099749388,0.199141273254367,0.379335801906163,0,0,0.203651327845314,0,0.350679099451593,0.379419222745544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.4770825982909,12.7760738385501,0.163934945376675,1.00988370881749,1.26203287766503,0,1.29254038639679,0.238968797952552,0.222798674082394,0.849229592366497,0.404810701674894,0.876767573733936,0.395287777946524,0.321321316421807,0.283880170416537,0.712262414669021,0.81443479676788,0.824850614862677,0,0.242780636154981,0.302323556964751,0.188605079755898,0,0,0.258428293168221,0,0.712994756769443,0.632073515871632,0,0,2.04263763452273,0.540183282093931,0,0.214337035031592,0.532020700926821,0.356737635204141,0.329098041204242,1.522324745573,0.23467170806371,0,0.220528398054962,0,0,0,0,0,0,22.9927374493032,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0.209088296014469,0.218362563746178,0.269728692769641,0.0826534557253359,0,0.129614973291793,0,0,0,0.330916980914195,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0.226730383615211,0,0,0,0.579568782096571,0.187682475451182,0.183151624267265,0.428736758158132,0,1.6942555278512,0.920650473014354,2.86447756719698,1.03111909406213,4.7955776383945,0.755393897389701,2.02506750069542,3.15224842256954,5.89085131679466,7.24864436452548,0,0.399024873401031,0.170733605754134,0.729320151204882,0.419226325255965,0.367687016900028,0.222246727801615,0,0.320919209591815,0,0,0,0.0936415074698824,0.128050304809739,0.114870937911227,0,0.115884325944855,0.38581844092741,0.412085900803307,0,0,0,0.238436189947321,0.145346416632329,0.188218760830661,0.0846146078916765,0.182927972872773,0.789209134313529,0,0,0.118635018124174,0.197008964751127,0,0.309873682371932,0,0.499621155875892,0,0.214871054048298,0.765153328275374,0.220591419119515,0.695603506861264
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87095238332354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00717454380462,1.62203089951223,0.550640256485045,0,5.01457859675027,0.439372365468944,1.1665793944457,1.25987779462826,1.43752564364972,0,0,0,0.514518872071894,0.286533439938757,2.57836046138721,0.404632921719196,1.05798195854407,0,0,0,0,0.988866362566974,0.7104801149461,0,0,0,0.135005938331691,0,0.856952953211411,0.662605622854841,0.122490799214954,0.0958454710182364,0,4.40463523997555,4.34136949489638,5.52983519722476,0.131886287730194,0,0,6.14202597803038,0,2.29197371665215,0.589257170947335,0.284743361598206,0,0.37863096666592,0.604572480854284,2.31891590961342,0,0,0,0,0,0.983110940922263,0.170430322578058,0,0.70667914902068,0,0,0,0,0,0,0,0.22836775943812,0,0.29688427812965,0.173485326766136,0,0,0.301445281105245,0.352766121407114,0.251333182659351,0,0.144599356919912,0,0,0.220841518460394,0,0,12.0040126774734,7.54008144528438,0,0,0,0,5.99162557619291,10.0650132620098,0.251308704225729,8.34356736922927,5.11430914660661,5.81806524766768,3.89379031362618,0.509196819251581,0,0,4.8401626853889,1.69156575851515,1.83921683546778,2.34080768746954,2.86339153887859,3.81004395247436,3.58718416797579,3.5606655332697,11.3829483125167,0,0.756424320671277,0.351902248327898,0.219195732427575,0.278047249225598,0.348252166522167,0.205782136407943,0.796137067273973,0,0,0,0.207125772535502,0.234526059981096,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,7.36014819974445,0.411618449517138,0,0,0.426576501070468,0.232236671860439,0.128867461322093,0.201683524623343,0.22237804384487,0,0,0.164698954724011,0.251335208800269,0.198956472041151,0,0,0.432276099749388,0.199141273254367,0.379335801906163,0,0,0.203651327845314,0,0.350679099451593,0.379419222745544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.4770825982909,12.7760738385501,0.163934945376675,1.00988370881749,1.26203287766503,0,1.29254038639679,0.238968797952552,0.222798674082394,0.849229592366497,0.404810701674894,0.876767573733936,0.395287777946524,0.321321316421807,0.283880170416537,0.712262414669021,0.81443479676788,0.824850614862677,0,0.242780636154981,0.302323556964751,0.188605079755898,0,0,0.258428293168221,0,0.712994756769443,0.632073515871632,0,0,2.04263763452273,0.540183282093931,0,0.214337035031592,0.532020700926821,0.356737635204141,0.329098041204242,1.522324745573,0.23467170806371,0,0.220528398054962,0,0,0,0,0,0,22.9927374493032,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0.209088296014469,0.218362563746178,0.269728692769641,0.0826534557253359,0,0.129614973291793,0,0,0,0.330916980914195,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0.226730383615211,0,0,0,0.579568782096571,0.187682475451182,0.183151624267265,0.428736758158132,0,1.6942555278512,0.920650473014354,2.86447756719698,1.03111909406213,4.7955776383945,0.755393897389701,2.02506750069542,3.15224842256954,5.89085131679466,7.24864436452548,0,0.399024873401031,0.170733605754134,0.729320151204882,0.419226325255965,0.367687016900028,0.222246727801615,0,0.320919209591815,0,0,0,0.0936415074698824,0.128050304809739,0.114870937911227,0,0.115884325944855,0.38581844092741,0.412085900803307,0,0,0,0.238436189947321,0.145346416632329,0.188218760830661,0.0846146078916765,0.182927972872773,0.789209134313529,0,0,0.118635018124174,0.197008964751127,0,0.309873682371932,0,0.499621155875892,0,0.214871054048298,0.765153328275374,0.220591419119515,0.695603506861264
|short_description=p4@Kcnab1
}}
}}

Latest revision as of 15:49, 25 September 2015

Short description:p4@Kcnab1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Kcnab1_5end
Coexpression cluster:MCL_coexpression_mm9:20
Association with transcript: -108bp_to_NM_010597, uc008pkj.1_5end
EntrezGene:Kcnab1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Kcnab1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.87
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.01
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.62
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C25.01
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.17
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.26
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.58
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.34
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.53
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.14
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.29
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.38
Mouse Schwann, donor2.CNhs12573.11746-123F90.60
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.32
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B212.00
cerebellum, neonate N30.CNhs11135.1395-42I27.54
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A45.99
corpus striatum, adult.CNhs10487.19-21D810.07
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D58.34
cortex, neonate N30.CNhs11107.1392-42F25.11
diencephalon, adult.CNhs10482.20-12F25.82
diencephalon, neonate N30.CNhs11201.1388-42B23.89
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G44.84
eyeball, embryo E12.CNhs11016.345-16C61.69
eyeball, embryo E14.CNhs10521.399-16E21.84
eyeball, embryo E15.CNhs10593.426-16C92.34
eyeball, embryo E17.CNhs11023.1261-18D42.86
eyeball, neonate N00.CNhs11207.633-15C63.81
eyeball, neonate N01.CNhs11140.1532-43E73.59
eyeball, neonate N02.CNhs11205.1551-44G83.56
eyeball, neonate N16.CNhs11188.777-19A211.38
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E87.36
hippocampus, neonate N00.CNhs11228.627-43G10.41
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.35
kidney, neonate N10.CNhs11206.758-6D50.38
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C222.48
medulla oblongata, neonate N30.CNhs11200.1396-42A312.78
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.01
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G60.82
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.04
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C922.99
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.03
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.80
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.15
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A85.89
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A97.25
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.13
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.11
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.70





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
neurectoderm6.82e-3264
neural plate6.82e-3264
presumptive neural plate6.82e-3264
ectoderm-derived structure2.48e-2795
ectoderm2.48e-2795
presumptive ectoderm2.48e-2795
ecto-epithelium7.60e-2773
pre-chordal neural plate3.52e-2449
central nervous system2.18e-2173
structure with developmental contribution from neural crest7.65e-2192
nervous system1.36e-2075
regional part of nervous system1.69e-2054
regional part of brain3.57e-1946
brain1.25e-1847
future brain1.25e-1847
neural tube4.61e-1852
neural rod4.61e-1852
future spinal cord4.61e-1852
neural keel4.61e-1852
eye9.46e-169
camera-type eye9.46e-169
simple eye9.46e-169
immature eye9.46e-169
ocular region9.46e-169
visual system9.46e-169
face9.46e-169
optic cup9.46e-169
optic vesicle9.46e-169
eye primordium9.46e-169
anterior neural tube7.62e-1340
subdivision of head1.51e-1211
regional part of forebrain1.23e-1139
forebrain1.23e-1139
future forebrain1.23e-1139
sense organ2.38e-1112
sensory system2.38e-1112
entire sense organ system2.38e-1112
occipital lobe7.12e-1110
visual cortex7.12e-1110
neocortex7.12e-1110
head2.46e-1013
ectodermal placode2.46e-1013
brain grey matter6.30e-1029
regional part of telencephalon6.30e-1029
telencephalon6.30e-1029
segmental subdivision of hindbrain3.04e-096
segmental subdivision of nervous system3.04e-096
hindbrain3.04e-096
presumptive hindbrain3.04e-096
regional part of cerebral cortex3.69e-0917
epithelium9.09e-09174
cerebral cortex9.19e-0921
cerebral hemisphere9.19e-0921
pallium9.19e-0921
cell layer1.47e-08176
gray matter5.53e-0834
tube2.08e-07114
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