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FFCP PHASE1:Mm9::chr8:67171777..67171791,-: Difference between revisions

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(Created page with "{{FFCP |id=chr8:67171777..67171791,- |short_description=p3@Cpe |description=CAGE_peak_3_at_Cpe_5end |association_with_transcript=45bp_to_ENSMUST00000048967,NM_013494,uc009...")
 
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{{FFCP
{{FFCP
|id=chr8:67171777..67171791,-
|DHSsupport=NA
|short_description=p3@Cpe
|DPIdataset=NA
|description=CAGE_peak_3_at_Cpe_5end
|association_with_transcript=45bp_to_ENSMUST00000048967,NM_013494,uc009luw.1_5end
|EntrezGene=12876
|EntrezGene=12876
|HGNC=
|HGNC=
|MCL_coexpression_id=1848
|TSSclassifier=NA
|UniProt=Q00493,Q543R4
|UniProt=Q00493,Q543R4
|association_with_transcript=45bp_to_ENSMUST00000048967,NM_013494,uc009luw.1_5end
|cluster_id=chr8:67171777..67171791,-
|description=CAGE_peak_3_at_Cpe_5end
|id=chr8:67171777..67171791,-
|ontology_enrichment_celltype=CL:0000055!5.44e-16!50;CL:0000221!1.13e-13!44;CL:0000133!1.13e-13!44;CL:0002319!1.35e-13!43;CL:0000393!3.99e-12!39;CL:0000211!3.99e-12!39;CL:0000540!2.71e-09!33;CL:0000047!2.71e-09!33;CL:0000031!2.71e-09!33;CL:0000404!2.71e-09!33;CL:0000117!3.14e-08!23;CL:0000337!3.14e-08!23;CL:0002321!3.82e-08!70;CL:0000220!3.82e-08!70
|ontology_enrichment_celltype_v019_2=CL:0000221,9.84e-14,44;CL:0000133,9.84e-14,44;CL:0002319,1.18e-13,43;CL:0000393,3.54e-12,39;CL:0000211,3.54e-12,39;CL:0000540,2.49e-09,33;CL:0000047,2.49e-09,33;CL:0000031,2.49e-09,33;CL:0000404,2.49e-09,33;CL:0000117,2.91e-08,23;CL:0000337,2.91e-08,23;CL:0002321,3.39e-08,70
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.78e-28,75;UBERON:0001017,5.02e-27,73;UBERON:0004121,6.73e-26,95;UBERON:0000924,6.73e-26,95;UBERON:0006601,6.73e-26,95;UBERON:0010314,1.75e-24,92;UBERON:0000073,2.30e-21,54;UBERON:0001049,9.17e-20,52;UBERON:0005068,9.17e-20,52;UBERON:0006241,9.17e-20,52;UBERON:0007135,9.17e-20,52;UBERON:0002346,1.97e-18,64;UBERON:0003075,1.97e-18,64;UBERON:0007284,1.97e-18,64;UBERON:0000955,3.68e-17,47;UBERON:0006238,3.68e-17,47;UBERON:0010371,4.01e-17,73;UBERON:0002616,1.13e-16,46;UBERON:0002020,4.63e-15,34;UBERON:0003080,1.72e-14,40;UBERON:0002780,7.15e-14,39;UBERON:0001890,7.15e-14,39;UBERON:0006240,7.15e-14,39;UBERON:0003056,1.69e-13,49;UBERON:0003528,1.34e-12,29;UBERON:0002791,1.34e-12,29;UBERON:0001893,1.34e-12,29;UBERON:0002619,4.04e-09,17;UBERON:0000956,1.06e-08,21;UBERON:0001869,1.06e-08,21;UBERON:0000203,1.06e-08,21;UBERON:0004111,2.78e-08,122;UBERON:0002021,9.08e-08,10;UBERON:0000411,9.08e-08,10;UBERON:0001950,9.08e-08,10;UBERON:0000025,1.61e-07,114
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|phase1_expression=36.8342348341026,1.04692622291808,0.909998478779072,0,0,5.03637815735669,6.07392865548367,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,19.6450000248971,0.397163804803541,0,4.15980299262857,4.12936705920906,1.14846392823004,1.29228598847722,0.861884930743556,1.71021077510736,2.01624103807945,1.33038306393183,0,0,0,0,0.831173226792462,0,0,0,0,0,0,0,54.2615285474738,52.1077426468305,80.5770241989782,23.4717403304412,29.6514212677407,72.0570679369068,62.2175677037707,39.0562116334761,40.250718022192,0,0,0,50.6801088990816,44.699216630446,75.2881254725066,31.5613678940973,33.8554226734101,27.8885817542719,27.7852516296688,19.5644855144451,4.49949858640699,6.92206453796882,1.4209602298922,47.0372173513895,85.6806820867067,11.0947885170071,9.31540974488665,9.25429829946081,76.8401148046232,67.1440364492905,16.6587486932338,11.0222291670972,14.7075005857603,86.9915459895171,97.4254389589982,99.690640083302,41.8079532104714,35.6801810049398,40.1103295328705,67.5622857583342,95.6696437053856,99.013264559373,56.5686884109442,54.8130971076546,35.2294952609818,43.5425611665808,87.5118666036576,16.8121403446973,3.44169550792555,0.679971333707751,1.07940638327563,0,0,10.9546647702766,22.6672329028817,24.9394564418754,26.8538076627859,16.3378366940949,24.3820307087204,33.1246811618639,63.9960032837998,4.76280290224671,6.08063677140237,3.53867111510348,6.50848114398642,3.88406825470758,80.0103129559405,6.93941307064543,11.2652226975492,11.761390360059,22.4576734423408,23.4001527200053,42.3496412781006,11.8653584512499,23.4250958210257,3.5384422077995,17.9561203441624,19.8757366614354,25.6983884161668,5.59175283654366,32.2058876712702,41.2610012422507,3.57639877292028,0.11981512450592,0,0,89.4250117246792,72.7425958481616,39.9580839718909,78.9162413672935,92.057564638919,84.3619460911814,90.368383528741,16.7016556714519,16.7949410323626,10.3616330957807,13.6787206326208,3.90361328888111,10.1156925950728,9.00310649026746,11.6042709733501,13.4712268319629,12.9394857487698,12.3686276418842,24.0594134787285,5.38919982332106,7.94245536704841,8.09375171154165,10.7405908889512,6.39508673218875,5.92028683087683,9.26019613835746,6.96619933864726,0,0,0,3.93538967817454,9.38104239924385,13.3245925481151,13.2577051927718,14.1670246858131,14.8096428371883,18.1376476905318,17.9743178937745,21.6015883379264,17.2787842409154,28.4009712856835,36.3998954860892,38.7429966677131,35.5671186771502,33.9542239463741,92.527577368216,29.9452422023718,5.28670052774077,2.90895623329899,8.95810652247983,9.52170354627798,7.60318021800351,9.68080918192044,6.67134131534611,6.84812254005213,8.0669940462567,9.71723832871664,11.3100843960121,12.3353012665514,14.2323783596958,8.08937467788799,5.83572734661674,9.35963984295526,2.65535061334314,3.31320686568214,3.38123207019241,4.2766778847516,4.84881217919064,4.76923575254166,5.56481526693464,3.98547399544926,2.98297582898612,3.20832626196681,0.592905254174298,0.166845105716094,1.17935397067922,0.224862112384854,0,0.964708639009667,0.763877555344259,0.575392274901621,0.324270453550071,0.823684239564244,2.87536413054709,1.86070473834252,1.87222603868736,0.252578877947112,0.358794827043824,0,3.32555742299888,6.82169082373745,1.46668478797823,2.54617628662782,0.938760993154008,2.51259386162724,2.61848004974615,6.04914308359176,3.15270288212382,2.21464689648775,5.26200736569707,6.06294264448231,5.18054945597687,3.90552458170081,1.50791283939272,2.17562273527484,0.983528546038072,1.65562047782839,41.5826028068381,42.5478422329697,12.622990794004,55.5436039849621,11.3582958989852,8.58965237452605,15.0796378412959,16.010909462821,30.523418349288,35.9507194101817,15.382806663646,22.2114452012597,18.5785255634866,48.1981974632711,55.2146931460165,14.0671826897132,14.3340524231147,34.3137855782874,3.98235415019888,8.25454162926937,13.6045600634138,29.610997521676,33.3691138955273,55.9531969257948,37.9889590957285,47.6229185615532,30.3022771627013,42.0328888054635,21.0837217149998,22.6898195146011,69.7901191795265,6.30213829109586,8.27895576209629,11.574199891706,12.0591358876746,18.3719882130133,26.9860393787478,34.1000743008351,20.4164386015428,19.9122146611991,8.82113592219848,10.2229476823718,14.8547272560233,12.3038366853438,11.8178620563105,8.86360858623331,10.4933101186746,48.5814291267535,0.512612642393558,3.92135049130123,2.03713980106683,1.31857919903284,1.36694227721025,0.457556346413045,0.169978429993855,0,0,14.3200592702267,4.74503990371703,7.5228202836934,7.56037385752609,6.89991376847747,9.60795280483181,13.7561633312517,16.8613049679685,23.5580347785627,17.498021394392,13.0481255748254,9.01908701894705,9.41954240077066,11.0857188606255,10.1114617938905,8.00790905561933,12.3337971608268,13.6134396829075,22.7857673476913,34.9181616937617,21.9841549951666,23.618460513145,1.26404448251271,3.04087822935246,2.67048488628551,1.16928740680016,1.61124026100733,1.39076948346885,0.841368146639782,1.03382669022204,1.00966449948148,0.914481679859998,0.100826185136841,0.682205165178267,0.0962118416403295,0.116876902181569,22.6730383615211,0,0.269141569828427,0.671538465456314,20.0917177793478,16.7037403151552,15.3847364384503,15.6488916727718,5.517293144389,84.71277639256,93.9063482474641,92.8090731771823,93.488131194966,89.7458100899541,104.244357839779,97.20324003338,83.3094225964808,80.6593487991884,83.359410192043,1.24544817101012,17.5570944296454,13.1464876430683,8.265628380322,5.8691685535835,4.59608771125035,9.33436256766784,9.06554251851134,5.13470735346904,10.8659801058433,9.12525479604863,8.86543804514558,10.2069243142172,8.19521950782327,8.09840112274147,6.19181798667996,8.11190281613988,7.7163688185482,14.0109206273124,9.12633304833263,9.25746981440622,11.1809757880383,7.39152188836695,11.046327664057,8.46984423737976,8.37684618127597,6.76833499629258,7.89209134313529,9.77789619690205,10.1005608898393,9.01626137743724,10.0474572023075,8.18462086339379,8.36658942404216,11.5743966588685,10.4920442733937,11.6965804222704,13.3220053509945,17.7898148824024,18.3090877869198,16.4626163290499
|short_description=p3@Cpe
}}
}}

Latest revision as of 16:11, 25 September 2015

Short description:p3@Cpe
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Cpe_5end
Coexpression cluster:MCL_coexpression_mm9:1848
Association with transcript: 45bp_to_ENSMUST00000048967, NM_013494, uc009luw.1_5end
EntrezGene:Cpe
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Cpe

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G736.83
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I75.04
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I86.07
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A319.65
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D14.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D24.13
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I20.86
Ileum epithelium, pool1.CNhs13199.10252-104B91.71
Ileum epithelium, pool2.CNhs13232.10253-104C12.02
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.33
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D854.26
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D952.11
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B380.58
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B723.47
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C229.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B872.06
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C362.22
Mouse Astrocytes, donor2.CNhs12078.11552-120C439.06
Mouse Astrocytes, donor3.CNhs12107.11633-122C440.25
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C150.68
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E144.70
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C575.29
Mouse Granule cells, donor1.CNhs12131.11713-123C331.56
Mouse Granule cells, donor2.CNhs12357.11731-123E333.86
Mouse Granule cells, donor3.CNhs12108.11636-122C727.89
Mouse Meningeal cells, donor1.CNhs12132.11716-123C627.79
Mouse Meningeal cells, donor3.CNhs12109.11639-122D119.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C74.50
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E76.92
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C847.04
Mouse Microglia, donor2.CNhs12634.11736-123E885.68
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D511.09
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F59.32
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D99.25
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F176.84
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D567.14
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D216.66
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F211.02
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D614.71
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D386.99
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F397.43
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D799.69
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D441.81
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F435.68
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D840.11
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E467.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E595.67
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I699.01
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D656.57
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F654.81
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E135.23
Mouse Schwann, donor1.CNhs12507.11728-123D943.54
Mouse Schwann, donor2.CNhs12573.11746-123F987.51
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G316.81
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F73.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A710.95
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I722.67
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E324.94
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I826.85
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G616.34
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H124.38
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I833.12
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B664.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G14.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G26.08
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.54
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B66.51
accessory axillary lymph node, adult.CNhs10475.1063-29H93.88
adrenal gland, adult.CNhs10508.49-24D780.01
adrenal gland, embryo E14.CNhs11038.406-44C56.94
adrenal gland, embryo E16.CNhs11004.1254-43D611.27
adrenal gland, embryo E17.CNhs11043.1263-45I111.76
adrenal gland, embryo E18.CNhs11026.1262-18F522.46
adrenal gland, neonate N00.CNhs11191.1311-23C123.40
adrenal gland, neonate N25.CNhs11223.1377-27I342.35
amnion, adult pregnant day17.5.CNhs10488.583-22A811.87
aorta, adult.CNhs10498.46-23H123.43
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F517.96
bone (os femoris), neonate N16.CNhs11225.1525-43A619.88
bone (os femoris), neonate N20.CNhs11195.1350-25C325.70
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B232.21
cerebellum, neonate N30.CNhs11135.1395-42I241.26
colon, adult.CNhs10468.36-18H73.58
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A489.43
corpus striatum, adult.CNhs10487.19-21D872.74
corpus striatum, neonate N00.CNhs11226.630-43F139.96
cortex, adult.CNhs10473.12-14D578.92
cortex, neonate N30.CNhs11107.1392-42F292.06
diencephalon, adult.CNhs10482.20-12F284.36
diencephalon, neonate N30.CNhs11201.1388-42B290.37
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B116.70
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A216.79
epididymis, adult.CNhs10490.58-23B210.36
eyeball, adult.CNhs10484.31-12G413.68
eyeball, embryo E12.CNhs11016.345-16C63.90
eyeball, embryo E14.CNhs10521.399-16E210.12
eyeball, embryo E15.CNhs10593.426-16C99.00
eyeball, embryo E17.CNhs11023.1261-18D411.60
eyeball, neonate N00.CNhs11207.633-15C613.47
eyeball, neonate N01.CNhs11140.1532-43E712.94
eyeball, neonate N02.CNhs11205.1551-44G812.37
eyeball, neonate N16.CNhs11188.777-19A224.06
forelimb, embryo E11.CNhs10596.335-25E25.39
forelimb, embryo E12.CNhs10600.359-14H27.94
forelimb, embryo E13.CNhs10589.384-1E28.09
forelimb, embryo E14.CNhs10577.413-26A810.74
forelimb, embryo E15.CNhs11007.437-20E76.40
forelimb, embryo E17.CNhs10598.1517-43C45.92
forelimb, embryo E18.CNhs11008.1520-43B59.26
gonad, embryo E13.CNhs11044.1564-45I66.97
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E93.94
heart, embryo E12.CNhs11015.353-12F59.38
heart, embryo E13.CNhs11013.376-3I913.32
heart, embryo E14.CNhs10597.403-26D413.26
heart, embryo E15.CNhs11017.431-16C814.17
heart, embryo E16.CNhs11021.457-17C614.81
heart, embryo E17.CNhs11025.479-18E518.14
heart, embryo E18.CNhs11030.1283-20G317.97
heart, neonate N00.CNhs11213.639-21E321.60
heart, neonate N03.CNhs11221.1349-25I217.28
heart, neonate N10.CNhs11118.749-24G128.40
heart, neonate N16.CNhs11209.782-15G136.40
heart, neonate N20.CNhs11127.821-26I638.74
heart, neonate N25.CNhs11196.1351-25D335.57
heart, neonate N30.CNhs11202.1390-42D233.95
hippocampus, adult.CNhs10478.13-16E892.53
hippocampus, neonate N00.CNhs11228.627-43G129.95
intestinal mucosa, adult.CNhs10506.860-29I35.29
intestine, adult.CNhs10496.178-9A32.91
intestine, embryo E12.CNhs11019.1251-16I58.96
intestine, embryo E13.CNhs11010.381-16D59.52
intestine, embryo E15.CNhs10602.976-16D87.60
intestine, embryo E16.CNhs10585.463-22H49.68
intestine, embryo E17.CNhs10582.482-18D36.67
intestine, embryo E18.CNhs10526.1289-20F76.85
intestine, neonate N00.CNhs11126.644-26D18.07
intestine, neonate N01.CNhs11192.1322-23E99.72
intestine, neonate N06.CNhs11102.688-20B811.31
intestine, neonate N07.CNhs11095.720-20F212.34
intestine, neonate N10.CNhs11098.755-23A514.23
intestine, neonate N20.CNhs11187.827-18D18.09
intestine, neonate N25.CNhs11121.1352-25E35.84
intestine, neonate N30.CNhs11131.1384-42G19.36
kidney, embryo E14.CNhs10606.411-4I92.66
kidney, embryo E15.CNhs10997.434-16F83.31
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I24.28
kidney, embryo E18.CNhs11001.1288-20C74.85
kidney, neonate N00.CNhs11214.646-21G74.77
kidney, neonate N10.CNhs11206.758-6D55.56
kidney, neonate N20.CNhs11113.832-19I13.99
kidney, neonate N25.CNhs11122.1353-25F32.98
kidney, neonate N30.CNhs11203.1385-42H13.21
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H61.18
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.96
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H21.86
liver, neonate N10.CNhs11115.751-24B91.87
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B13.33
lung, embryo E12.CNhs10522.354-16G26.82
lung, embryo E14.CNhs10604.404-26F81.47
lung, embryo E15.CNhs11020.432-17C52.55
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A62.51
lung, embryo E18.CNhs10583.1287-20I62.62
lung, neonate N00.CNhs11224.640-42C66.05
lung, neonate N06.CNhs11212.683-20E53.15
lung, neonate N07.CNhs11111.715-19A32.21
lung, neonate N10.CNhs11219.750-23E65.26
lung, neonate N20.CNhs11109.822-18A46.06
lung, neonate N25.CNhs11119.1359-25C75.18
lung, neonate N30.CNhs11133.1394-42H23.91
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.18
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H21.66
medulla oblongata, adult.CNhs10477.17-12C241.58
medulla oblongata, neonate N30.CNhs11200.1396-42A342.55
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C712.62
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C255.54
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E111.36
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E28.59
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E315.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D716.01
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D830.52
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D935.95
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D415.38
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D522.21
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D618.58
olfactory brain, adult.CNhs10489.18-22I948.20
ovary, adult.CNhs10507.91-2I755.21
ovary, embryo E18.CNhs11040.505-44H714.07
ovary, neonate N00.CNhs11217.1299-22I414.33
oviduct, adult pregnant day01.CNhs10500.988-6G634.31
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F48.25
pancreas, embryo E15.CNhs11042.1556-45F213.60
pancreas, embryo E16.CNhs11003.460-26E529.61
pancreas, embryo E17.CNhs10599.1558-45G333.37
pancreas, embryo E18.CNhs10580.1535-43I755.95
pancreas, neonate N00.CNhs11105.645-26G937.99
pancreas, neonate N01.CNhs11138.1531-43D747.62
pancreas, neonate N02.CNhs11139.1539-43D830.30
pancreas, neonate N16.CNhs11136.787-43B642.03
pancreas, neonate N25.CNhs11094.1555-45E221.08
pancreas, neonate N30.CNhs11182.1548-44H522.69
pituitary gland, adult.CNhs10493.21-1G869.79
pituitary gland, embryo E12.CNhs11018.346-16E66.30
pituitary gland, embryo E13.CNhs11009.370-44C78.28
pituitary gland, embryo E14.CNhs11037.398-44A511.57
pituitary gland, embryo E15.CNhs10592.427-16B912.06
pituitary gland, embryo E16.CNhs11036.449-43F618.37
pituitary gland, embryo E17.CNhs11039.1265-44F526.99
pituitary gland, neonate N00.CNhs11190.1308-22E934.10
placenta, adult pregnant day10.CNhs10472.539-13I720.42
placenta, adult pregnant day17.CNhs10464.577-18G319.91
prostate, adult.CNhs10470.859-1F88.82
skin, adult.CNhs10492.30-1C310.22
skin, neonate N00.CNhs11124.650-25G414.85
skin, neonate N03.CNhs11215.662-22H312.30
skin, neonate N06.CNhs11097.693-20I511.82
skin, neonate N10.CNhs11108.762-6C48.86
small intestine, neonate N16.CNhs11114.790-21I110.49
spinal cord, adult.CNhs10505.24-13C948.58
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C13.92
spleen, embryo E18.CNhs11011.1271-21F22.04
spleen, neonate N10.CNhs11116.752-24D11.32
spleen, neonate N20.CNhs11112.824-19H11.37
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H614.32
stomach, embryo E12.CNhs10588.356-43E34.75
stomach, embryo E15.CNhs10603.1252-16G87.52
stomach, embryo E16.CNhs11022.459-17D47.56
stomach, embryo E17.CNhs11006.1035-18D56.90
stomach, embryo E18.CNhs10999.1286-20C69.61
stomach, neonate N03.CNhs11193.1340-24B813.76
stomach, neonate N07.CNhs11210.718-18A916.86
stomach, neonate N25.CNhs11104.1355-25E423.56
stomach, neonate N30.CNhs11134.1386-42I117.50
submandibular gland, adult.CNhs10469.59-29C113.05
testis, adult.CNhs10504.57-7G59.02
testis, embryo E13.CNhs11031.389-23F59.42
testis, embryo E15.CNhs11034.443-27C511.09
testis, embryo E16.CNhs11033.470-26G510.11
testis, embryo E17.CNhs11029.486-18I58.01
testis, embryo E18.CNhs11027.503-18G512.33
testis, neonate N00.CNhs11189.1300-22B713.61
testis, neonate N07.CNhs11222.726-26I422.79
testis, neonate N10.CNhs11204.763-44D934.92
testis, neonate N20.CNhs11110.839-18H321.98
testis, neonate N30.CNhs11130.1391-42E223.62
thymus, adult.CNhs10471.38-12B51.26
thymus, embryo E14.CNhs11041.402-44I43.04
thymus, embryo E15.CNhs11005.430-45I22.67
thymus, embryo E16.CNhs11002.456-26C51.17
thymus, embryo E17.CNhs10581.478-18C11.61
thymus, embryo E18.CNhs10595.1273-19G41.39
thymus, neonate N02.CNhs11181.1541-43F80.84
thymus, neonate N03.CNhs11137.2104-43C71.03
thymus, neonate N06.CNhs11197.681-26C41.01
thymus, neonate N07.CNhs11211.713-19D30.91
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.68
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B422.67
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.27
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.67
urinary bladder, adult.CNhs10481.879-12E420.09
uterus, adult pregnant day19.CNhs10497.590-15F516.70
uterus, adult.CNhs10509.92-27E515.38
vagina, adult.CNhs10502.89-27D515.65
vesicular gland, adult.CNhs10491.51-27F85.52
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A184.71
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A293.91
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A392.81
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D793.49
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A489.75
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5104.24
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A697.20
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A783.31
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A880.66
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A983.36
whole body, embryo E11.CNhs11014.324-5I81.25
whole body, embryo E12.CNhs10587.857-27C917.56
whole body, embryo E13.CNhs10512.372-23H213.15
whole body, embryo E14.5.CNhs10578.420-27D28.27
whole body, embryo E14.CNhs10519.395-14B15.87
whole body, embryo E16.CNhs10514.453-14F24.60
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G59.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G59.07
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.13
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G510.87
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G59.13
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G58.87
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G510.21
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G58.20
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G58.10
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G56.19
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G58.11
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G57.72
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G514.01
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G59.13
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G59.26
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G511.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G57.39
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G511.05
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G58.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G58.38
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G56.77
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G57.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G59.78
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G510.10
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G59.02
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G510.05
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G58.18
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G58.37
whole body, embryo E17.5.CNhs10513.490-9F911.57
whole body, embryo E17.CNhs10517.475-3I510.49
whole body, embryo E18.CNhs10516.493-3B311.70
whole body, neonate N00.CNhs10525.657-19C213.32
whole body, neonate N01.CNhs10576.659-23C617.79
whole body, neonate N06.CNhs10515.692-21D118.31
whole body, neonate N10.CNhs10518.761-6B416.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
ectodermal cell9.84e-1444
neurectodermal cell9.84e-1444
neural cell1.18e-1343
electrically responsive cell3.54e-1239
electrically active cell3.54e-1239
neuron2.49e-0933
neuronal stem cell2.49e-0933
neuroblast2.49e-0933
electrically signaling cell2.49e-0933
CNS neuron (sensu Vertebrata)2.91e-0823
neuroblast (sensu Vertebrata)2.91e-0823
embryonic cell3.39e-0870

Uber anatomy
Ontology termp-valuen
nervous system2.78e-2875
central nervous system5.02e-2773
ectoderm-derived structure6.73e-2695
ectoderm6.73e-2695
presumptive ectoderm6.73e-2695
structure with developmental contribution from neural crest1.75e-2492
regional part of nervous system2.30e-2154
neural tube9.17e-2052
neural rod9.17e-2052
future spinal cord9.17e-2052
neural keel9.17e-2052
neurectoderm1.97e-1864
neural plate1.97e-1864
presumptive neural plate1.97e-1864
brain3.68e-1747
future brain3.68e-1747
ecto-epithelium4.01e-1773
regional part of brain1.13e-1646
gray matter4.63e-1534
anterior neural tube1.72e-1440
regional part of forebrain7.15e-1439
forebrain7.15e-1439
future forebrain7.15e-1439
pre-chordal neural plate1.69e-1349
brain grey matter1.34e-1229
regional part of telencephalon1.34e-1229
telencephalon1.34e-1229
regional part of cerebral cortex4.04e-0917
cerebral cortex1.06e-0821
cerebral hemisphere1.06e-0821
pallium1.06e-0821
anatomical conduit2.78e-08122
occipital lobe9.08e-0810
visual cortex9.08e-0810
neocortex9.08e-0810
tube1.61e-07114
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