FFCP PHASE1:Mm9::chr8:67171824..67171835,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr8:67171824..67171835,- to FFCP PHASE1:Mm9::chr8:67171824..67171835,-: NSchange) |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=12876 | |EntrezGene=12876 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1848 | |||
|TSSclassifier=NA | |||
|UniProt=Q00493,Q543R4 | |UniProt=Q00493,Q543R4 | ||
|association_with_transcript=1bp_to_ENSMUST00000048967,NM_013494,uc009luw.1_5end | |||
|cluster_id=chr8:67171824..67171835,- | |||
|description=CAGE_peak_5_at_Cpe_5end | |||
|id=chr8:67171824..67171835,- | |||
|ontology_enrichment_celltype=CL:0000055!1.10e-14!50;CL:0000221!3.22e-13!44;CL:0000133!3.22e-13!44;CL:0002319!6.27e-13!43;CL:0000393!6.62e-12!39;CL:0000211!6.62e-12!39;CL:0000117!7.35e-10!23;CL:0000337!7.35e-10!23;CL:0000540!2.52e-09!33;CL:0000047!2.52e-09!33;CL:0000031!2.52e-09!33;CL:0000404!2.52e-09!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.76e-13,44;CL:0000133,1.76e-13,44;CL:0002319,3.48e-13,43;CL:0000393,3.87e-12,39;CL:0000211,3.87e-12,39;CL:0000117,4.78e-10,23;CL:0000337,4.78e-10,23;CL:0000540,1.68e-09,33;CL:0000047,1.68e-09,33;CL:0000031,1.68e-09,33;CL:0000404,1.68e-09,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!7.47e-29!75;UBERON:0001016!7.47e-29!75;UBERON:0004121!4.44e-28!102;UBERON:0000924!4.44e-28!102;UBERON:0006601!4.44e-28!102;UBERON:0001017!7.85e-28!73;UBERON:0005743!7.85e-28!73;UBERON:0002346!8.42e-23!71;UBERON:0003075!8.42e-23!71;UBERON:0007284!8.42e-23!71;UBERON:0001049!3.64e-22!52;UBERON:0005068!3.64e-22!52;UBERON:0006241!3.64e-22!52;UBERON:0007135!3.64e-22!52;UBERON:0000033!1.34e-21!63;UBERON:0000955!6.36e-21!50;UBERON:0006238!6.36e-21!50;UBERON:0002616!2.18e-20!49;UBERON:0002020!8.93e-17!34;UBERON:0003056!2.30e-16!49;UBERON:0003080!2.65e-16!40;UBERON:0002780!1.05e-15!39;UBERON:0001890!1.05e-15!39;UBERON:0006240!1.05e-15!39;UBERON:0002791!9.34e-14!29;UBERON:0003528!9.34e-14!29;UBERON:0001893!9.34e-14!29;UBERON:0002619!2.72e-10!17;UBERON:0000956!2.24e-09!21;UBERON:0001869!2.24e-09!21;UBERON:0000203!2.24e-09!21;UBERON:0007811!1.28e-08!86;UBERON:0004111!2.38e-08!122;UBERON:0000153!3.10e-08!94;UBERON:0002021!4.37e-08!10;UBERON:0000411!4.37e-08!10;UBERON:0001950!4.37e-08!10;UBERON:0000025!6.15e-08!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.80e-29,75;UBERON:0001017,2.00e-28,73;UBERON:0010314,2.64e-27,92;UBERON:0004121,2.03e-26,95;UBERON:0000924,2.03e-26,95;UBERON:0006601,2.03e-26,95;UBERON:0000073,4.18e-24,54;UBERON:0001049,1.25e-22,52;UBERON:0005068,1.25e-22,52;UBERON:0006241,1.25e-22,52;UBERON:0007135,1.25e-22,52;UBERON:0002346,1.59e-21,64;UBERON:0003075,1.59e-21,64;UBERON:0007284,1.59e-21,64;UBERON:0000955,1.89e-19,47;UBERON:0006238,1.89e-19,47;UBERON:0010371,4.98e-19,73;UBERON:0002616,6.49e-19,46;UBERON:0002020,4.06e-17,34;UBERON:0003056,1.07e-16,49;UBERON:0003080,1.23e-16,40;UBERON:0002780,5.04e-16,39;UBERON:0001890,5.04e-16,39;UBERON:0006240,5.04e-16,39;UBERON:0003528,4.96e-14,29;UBERON:0002791,4.96e-14,29;UBERON:0001893,4.96e-14,29;UBERON:0002619,1.73e-10,17;UBERON:0000956,1.49e-09,21;UBERON:0001869,1.49e-09,21;UBERON:0000203,1.49e-09,21;UBERON:0002021,3.11e-08,10;UBERON:0000411,3.11e-08,10;UBERON:0001950,3.11e-08,10;UBERON:0004111,2.86e-07,122;UBERON:0000025,7.29e-07,114 | |||
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| ||
|short_description=p5@Cpe | |||
}} | }} |
Latest revision as of 16:11, 25 September 2015
Short description: | p5@Cpe |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Cpe_5end |
Coexpression cluster: | MCL_coexpression_mm9:1848 |
Association with transcript: | 1bp_to_ENSMUST00000048967, NM_013494, uc009luw.1_5end |
EntrezGene: | Cpe |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.76e-13 | 44 |
neurectodermal cell | 1.76e-13 | 44 |
neural cell | 3.48e-13 | 43 |
electrically responsive cell | 3.87e-12 | 39 |
electrically active cell | 3.87e-12 | 39 |
CNS neuron (sensu Vertebrata) | 4.78e-10 | 23 |
neuroblast (sensu Vertebrata) | 4.78e-10 | 23 |
neuron | 1.68e-09 | 33 |
neuronal stem cell | 1.68e-09 | 33 |
neuroblast | 1.68e-09 | 33 |
electrically signaling cell | 1.68e-09 | 33 |