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FFCP PHASE1:Mm9::chr3:72870218..72870251,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=626082
|EntrezGene=626082
|HGNC=
|HGNC=
|MCL_coexpression_id=2
|MCL_coexpression_id=2
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=-21bp_to_NR_040557,uc008pmu.1_5end
|association_with_transcript=-21bp_to_NR_040557,uc008pmu.1_5end
|cluster_id=chr3:72870218..72870251,+
|description=CAGE_peak_1_at_LOC626082_5end
|description=CAGE_peak_1_at_LOC626082_5end
|id=chr3:72870218..72870251,+
|id=chr3:72870218..72870251,+
|ontology_enrichment_celltype=CL:0000117!1.22e-12!23;CL:0000337!1.22e-12!23;CL:0000540!5.01e-11!33;CL:0000047!5.01e-11!33;CL:0000031!5.01e-11!33;CL:0000404!5.01e-11!33;CL:0000393!4.39e-08!39;CL:0000211!4.39e-08!39;CL:0000221!5.72e-08!44;CL:0000133!5.72e-08!44;CL:0002319!1.09e-07!43
|ontology_enrichment_celltype=CL:0000117!1.22e-12!23;CL:0000337!1.22e-12!23;CL:0000540!5.01e-11!33;CL:0000047!5.01e-11!33;CL:0000031!5.01e-11!33;CL:0000404!5.01e-11!33;CL:0000393!4.39e-08!39;CL:0000211!4.39e-08!39;CL:0000221!5.72e-08!44;CL:0000133!5.72e-08!44;CL:0002319!1.09e-07!43
|ontology_enrichment_celltype_v019_2=CL:0000117,1.25e-14,23;CL:0000337,1.25e-14,23;CL:0000540,3.78e-10,33;CL:0000047,3.78e-10,33;CL:0000031,3.78e-10,33;CL:0000404,3.78e-10,33;CL:0000393,1.23e-07,39;CL:0000211,1.23e-07,39;CL:0000221,9.84e-07,44;CL:0000133,9.84e-07,44
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!6.76e-21!73;UBERON:0005743!6.76e-21!73;UBERON:0000073!8.98e-21!75;UBERON:0001016!8.98e-21!75;UBERON:0000033!4.58e-20!63;UBERON:0001049!1.27e-19!52;UBERON:0005068!1.27e-19!52;UBERON:0006241!1.27e-19!52;UBERON:0007135!1.27e-19!52;UBERON:0002020!2.20e-19!34;UBERON:0002346!1.05e-18!71;UBERON:0003075!1.05e-18!71;UBERON:0007284!1.05e-18!71;UBERON:0000955!2.67e-18!50;UBERON:0006238!2.67e-18!50;UBERON:0004121!7.33e-18!102;UBERON:0000924!7.33e-18!102;UBERON:0006601!7.33e-18!102;UBERON:0002616!1.38e-17!49;UBERON:0003056!2.58e-17!49;UBERON:0002791!4.56e-16!29;UBERON:0003528!4.56e-16!29;UBERON:0001893!4.56e-16!29;UBERON:0003080!9.26e-16!40;UBERON:0002780!4.04e-15!39;UBERON:0001890!4.04e-15!39;UBERON:0006240!4.04e-15!39;UBERON:0000956!1.76e-11!21;UBERON:0001869!1.76e-11!21;UBERON:0000203!1.76e-11!21;UBERON:0002619!2.81e-10!17;UBERON:0002021!1.78e-09!10;UBERON:0000411!1.78e-09!10;UBERON:0001950!1.78e-09!10;UBERON:0007811!2.33e-09!86;UBERON:0000153!1.03e-08!94
|ontology_enrichment_uberon=UBERON:0001017!6.76e-21!73;UBERON:0005743!6.76e-21!73;UBERON:0000073!8.98e-21!75;UBERON:0001016!8.98e-21!75;UBERON:0000033!4.58e-20!63;UBERON:0001049!1.27e-19!52;UBERON:0005068!1.27e-19!52;UBERON:0006241!1.27e-19!52;UBERON:0007135!1.27e-19!52;UBERON:0002020!2.20e-19!34;UBERON:0002346!1.05e-18!71;UBERON:0003075!1.05e-18!71;UBERON:0007284!1.05e-18!71;UBERON:0000955!2.67e-18!50;UBERON:0006238!2.67e-18!50;UBERON:0004121!7.33e-18!102;UBERON:0000924!7.33e-18!102;UBERON:0006601!7.33e-18!102;UBERON:0002616!1.38e-17!49;UBERON:0003056!2.58e-17!49;UBERON:0002791!4.56e-16!29;UBERON:0003528!4.56e-16!29;UBERON:0001893!4.56e-16!29;UBERON:0003080!9.26e-16!40;UBERON:0002780!4.04e-15!39;UBERON:0001890!4.04e-15!39;UBERON:0006240!4.04e-15!39;UBERON:0000956!1.76e-11!21;UBERON:0001869!1.76e-11!21;UBERON:0000203!1.76e-11!21;UBERON:0002619!2.81e-10!17;UBERON:0002021!1.78e-09!10;UBERON:0000411!1.78e-09!10;UBERON:0001950!1.78e-09!10;UBERON:0007811!2.33e-09!86;UBERON:0000153!1.03e-08!94
|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.68e-25,34;UBERON:0000073,9.05e-24,54;UBERON:0001049,5.13e-22,52;UBERON:0005068,5.13e-22,52;UBERON:0006241,5.13e-22,52;UBERON:0007135,5.13e-22,52;UBERON:0001017,1.18e-21,73;UBERON:0001016,1.11e-20,75;UBERON:0003528,2.08e-20,29;UBERON:0002791,2.08e-20,29;UBERON:0001893,2.08e-20,29;UBERON:0003080,4.78e-18,40;UBERON:0000955,5.80e-18,47;UBERON:0006238,5.80e-18,47;UBERON:0002346,1.06e-17,64;UBERON:0003075,1.06e-17,64;UBERON:0007284,1.06e-17,64;UBERON:0002780,3.76e-17,39;UBERON:0001890,3.76e-17,39;UBERON:0006240,3.76e-17,39;UBERON:0002616,5.11e-17,46;UBERON:0010371,1.19e-15,73;UBERON:0002619,1.72e-15,17;UBERON:0004121,5.55e-15,95;UBERON:0000924,5.55e-15,95;UBERON:0006601,5.55e-15,95;UBERON:0000956,7.99e-15,21;UBERON:0001869,7.99e-15,21;UBERON:0000203,7.99e-15,21;UBERON:0003056,3.57e-14,49;UBERON:0002021,1.88e-13,10;UBERON:0000411,1.88e-13,10;UBERON:0001950,1.88e-13,10;UBERON:0010314,7.30e-10,92;UBERON:0002420,9.35e-07,8;UBERON:0007245,9.35e-07,8;UBERON:0010009,9.35e-07,8;UBERON:0010011,9.35e-07,8;UBERON:0000454,9.35e-07,8
|phase1_expression=1.60148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8064285749853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,1.21389876515759,3.1739458756322,4.43681982454325,0,0,0,0,0,0,0.384218305321555,1.55534418462716,0.675029691658453,0.420649922702764,4.28476476605705,4.19650227808066,5.63457676388789,3.1629005436018,2.75765635983006,1.10115880999389,4.59674417106676,3.37934373163736,3.42904348098504,3.11057988248193,3.12548022334056,0.558365998002762,5.6276261003168,3.97275444219706,2.65165726926301,6.97621235915604,5.03278503728312,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0.280888840263504,0,0,0,1.12674735821344,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0.150722640552623,0.352766121407114,0,0,0,0,0,0,0,0,0.292780797011547,0.209446706813455,0.255457055208591,0,0,0,3.89455662452539,6.40500843946077,8.67015029578764,10.4294592115366,12.5300574091862,7.48036960414416,11.5191296778108,0.101839363850316,0,0.252722758433675,0.420883711772948,0.260240885925407,0.459804208866946,0.540186389416048,0.60281927134286,0.204109497453984,0.512454881139399,0.655912071918102,3.62184719034622,0,0,0.351902248327898,0.219195732427575,0.556094498451196,0.696504333044333,0,0.398068533636986,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,28.5994330047213,8.74689205223918,0,0,0.426576501070468,0.232236671860439,0.38660238396628,0.201683524623343,0.667134131534611,0.380451252225118,0.474529061544512,0.658795818896044,0.754005626400808,1.59165177632921,0.779856348476481,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0.568474235311454,0,0,0,0.335012514883631,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,2.56880943980467,3.8679856575427,0,0,0.631016438832513,0,1.07711698866399,0.477937595905104,0.222798674082394,0.283076530788832,0,0,0.395287777946524,7.06906896127976,0.709700426041343,0.178065603667255,0.162886959353576,1.97964147567043,0,0,0,0.377210159511796,0,0,0.258428293168221,0,0,0.316036757935816,0,0,0,0.36012218806262,0,1.07168517515796,0.532020700926821,0.178368817602071,0.329098041204242,0,3.75474732901937,0.63549621259146,0,0,0,0.361877549568935,0,0.164140899745061,0,1.8542530201051,0,0.412773735926445,0.185194527369712,0,0,0,0,0,0,0,0.316335993581135,2.23651413839534,2.26811215725783,1.67270636811575,2.62035076495413,1.88810084938749,1.90102948168273,0.26175594198403,0.518459893167171,0,0,0,0,0,0,0,0.234714477291508,0.13020438484395,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0.93841237725591,0.915758121336325,0,0,18.0720589637461,18.8733346967943,18.3326564300607,16.3260523226503,12.3314853558716,13.5970901530146,12.8254275044043,19.3638117386415,13.1411298605419,15.0150490408028,0,0,1.02440163452481,1.94485373654635,0.838452650511929,1.2869045591501,2.889207461421,1.85431551515005,2.24643446714271,1.51618327058278,3.04175159868288,3.77252682772152,2.71560371662659,3.3293079250532,2.5845961030026,2.85776214769844,2.54945517078682,3.6652751888104,2.06042950401653,3.82717192349433,0.685738504770831,2.12970967391205,2.38436189947321,3.34296758254356,1.88218760830661,2.11536519729191,3.29270351170991,2.89376682581627,2.71608227691724,2.24456908663095,2.13543032623513,3.25064791839359,0.818462086339379,1.39443157067369,1.35034627686799,1.99848462350357,1.63752125911786,0.859484216193193,0.765153328275374,0.220591419119515,0.463735671240843
|phase1_expression=1.60148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8064285749853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,1.21389876515759,3.1739458756322,4.43681982454325,0,0,0,0,0,0,0.384218305321555,1.55534418462716,0.675029691658453,0.420649922702764,4.28476476605705,4.19650227808066,5.63457676388789,3.1629005436018,2.75765635983006,1.10115880999389,4.59674417106676,3.37934373163736,3.42904348098504,3.11057988248193,3.12548022334056,0.558365998002762,5.6276261003168,3.97275444219706,2.65165726926301,6.97621235915604,5.03278503728312,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0.280888840263504,0,0,0,1.12674735821344,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0.150722640552623,0.352766121407114,0,0,0,0,0,0,0,0,0.292780797011547,0.209446706813455,0.255457055208591,0,0,0,3.89455662452539,6.40500843946077,8.67015029578764,10.4294592115366,12.5300574091862,7.48036960414416,11.5191296778108,0.101839363850316,0,0.252722758433675,0.420883711772948,0.260240885925407,0.459804208866946,0.540186389416048,0.60281927134286,0.204109497453984,0.512454881139399,0.655912071918102,3.62184719034622,0,0,0.351902248327898,0.219195732427575,0.556094498451196,0.696504333044333,0,0.398068533636986,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,28.5994330047213,8.74689205223918,0,0,0.426576501070468,0.232236671860439,0.38660238396628,0.201683524623343,0.667134131534611,0.380451252225118,0.474529061544512,0.658795818896044,0.754005626400808,1.59165177632921,0.779856348476481,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0.568474235311454,0,0,0,0.335012514883631,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,2.56880943980467,3.8679856575427,0,0,0.631016438832513,0,1.07711698866399,0.477937595905104,0.222798674082394,0.283076530788832,0,0,0.395287777946524,7.06906896127976,0.709700426041343,0.178065603667255,0.162886959353576,1.97964147567043,0,0,0,0.377210159511796,0,0,0.258428293168221,0,0,0.316036757935816,0,0,0,0.36012218806262,0,1.07168517515796,0.532020700926821,0.178368817602071,0.329098041204242,0,3.75474732901937,0.63549621259146,0,0,0,0.361877549568935,0,0.164140899745061,0,1.8542530201051,0,0.412773735926445,0.185194527369712,0,0,0,0,0,0,0,0.316335993581135,2.23651413839534,2.26811215725783,1.67270636811575,2.62035076495413,1.88810084938749,1.90102948168273,0.26175594198403,0.518459893167171,0,0,0,0,0,0,0,0.234714477291508,0.13020438484395,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0.93841237725591,0.915758121336325,0,0,18.0720589637461,18.8733346967943,18.3326564300607,16.3260523226503,12.3314853558716,13.5970901530146,12.8254275044043,19.3638117386415,13.1411298605419,15.0150490408028,0,0,1.02440163452481,1.94485373654635,0.838452650511929,1.2869045591501,2.889207461421,1.85431551515005,2.24643446714271,1.51618327058278,3.04175159868288,3.77252682772152,2.71560371662659,3.3293079250532,2.5845961030026,2.85776214769844,2.54945517078682,3.6652751888104,2.06042950401653,3.82717192349433,0.685738504770831,2.12970967391205,2.38436189947321,3.34296758254356,1.88218760830661,2.11536519729191,3.29270351170991,2.89376682581627,2.71608227691724,2.24456908663095,2.13543032623513,3.25064791839359,0.818462086339379,1.39443157067369,1.35034627686799,1.99848462350357,1.63752125911786,0.859484216193193,0.765153328275374,0.220591419119515,0.463735671240843
|short_description=p1@LOC626082
|short_description=p1@LOC626082
}}
}}

Latest revision as of 16:42, 25 September 2015

Short description:p1@LOC626082
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_LOC626082_5end
Coexpression cluster:MCL_coexpression_mm9:2
Association with transcript: -21bp_to_NR_040557, uc008pmu.1_5end
EntrezGene:LOC626082
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@LOC626082

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.60
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.81
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.21
Mouse Granule cells, donor2.CNhs12357.11731-123E33.17
Mouse Granule cells, donor3.CNhs12108.11636-122C74.44
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.56
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.68
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.20
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D25.63
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.16
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.60
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.38
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.43
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.11
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.63
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.97
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.65
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F66.98
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.03
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.13
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A43.89
corpus striatum, adult.CNhs10487.19-21D86.41
corpus striatum, neonate N00.CNhs11226.630-43F18.67
cortex, adult.CNhs10473.12-14D510.43
cortex, neonate N30.CNhs11107.1392-42F212.53
diencephalon, adult.CNhs10482.20-12F27.48
diencephalon, neonate N30.CNhs11201.1388-42B211.52
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.20
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.66
eyeball, neonate N16.CNhs11188.777-19A23.62
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E828.60
hippocampus, neonate N00.CNhs11228.627-43G18.75
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F21.59
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C22.57
medulla oblongata, neonate N30.CNhs11200.1396-42A33.87
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I97.07
ovary, adult.CNhs10507.91-2I70.71
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G61.98
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I73.75
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.36
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.85
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G82.24
stomach, embryo E16.CNhs11022.459-17D42.27
stomach, embryo E17.CNhs11006.1035-18D51.67
stomach, embryo E18.CNhs10999.1286-20C62.62
stomach, neonate N03.CNhs11193.1340-24B81.89
stomach, neonate N07.CNhs11210.718-18A91.90
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.94
uterus, adult.CNhs10509.92-27E50.92
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A118.07
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A218.87
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A318.33
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D716.33
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A412.33
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A513.60
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A612.83
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A719.36
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A813.14
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A915.02
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H21.02
whole body, embryo E14.5.CNhs10578.420-27D21.94
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.04
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.77
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.72
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.58
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.55
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.67
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.83
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.13
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.34
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.88
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.12
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.29
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.72
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.14
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.25
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.39
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I52.00
whole body, embryo E18.CNhs10516.493-3B31.64
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
gray matter2.68e-2534
regional part of nervous system9.05e-2454
neural tube5.13e-2252
neural rod5.13e-2252
future spinal cord5.13e-2252
neural keel5.13e-2252
central nervous system1.18e-2173
nervous system1.11e-2075
brain grey matter2.08e-2029
regional part of telencephalon2.08e-2029
telencephalon2.08e-2029
anterior neural tube4.78e-1840
brain5.80e-1847
future brain5.80e-1847
neurectoderm1.06e-1764
neural plate1.06e-1764
presumptive neural plate1.06e-1764
regional part of forebrain3.76e-1739
forebrain3.76e-1739
future forebrain3.76e-1739
regional part of brain5.11e-1746
ecto-epithelium1.19e-1573
regional part of cerebral cortex1.72e-1517
ectoderm-derived structure5.55e-1595
ectoderm5.55e-1595
presumptive ectoderm5.55e-1595
cerebral cortex7.99e-1521
cerebral hemisphere7.99e-1521
pallium7.99e-1521
pre-chordal neural plate3.57e-1449
occipital lobe1.88e-1310
visual cortex1.88e-1310
neocortex1.88e-1310
structure with developmental contribution from neural crest7.30e-1092
basal ganglion9.35e-078
nuclear complex of neuraxis9.35e-078
aggregate regional part of brain9.35e-078
collection of basal ganglia9.35e-078
cerebral subcortex9.35e-078
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